Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------>NtERF2              <---------RAP2.6(3)             --------->RAP2.3(2)             --------->RRTF1(2)             --------->DREB2C(2)             --------->RAP2.3(3)             --------->DEAR3(1)             <---------ETT(1)             ----------->HVH21             --------->RAP2.6(2)             --------->RRTF1(3)             --------->At1g77200             --------->DEAR4(1)            --------->ERF1                                                                         --            --------->RAP2.3(1)                                                                    --            --------->ORA47(2)                      ------>ZmHOX2a(2)                              --           --------->At4g35610           ----------->RAV1(2)   <---------MYB52(1)      <---------MYB52(1)           ------>NtERF2   --------->HSFB2a(2)     >>>>>>>>>>>>>>>>>LFY   <---------ZAT18          --           --------->LBD16 <---------HSFB2a(2) <--------P    <---------ANAC46         <-----------HVH21         <---------LBD16   --------->LBD16    <-------GAMYB  <---------ANAC58      <---------At4g35610  <---------ARR11(3)      <---------LBD16--------->ZAT2      <---------ANAC58     ------->TEIL   <--- --->ZmHOX2a(2)          <---------LBD16<XXXXXXXXXXXXXXXXXXXXMIR869.1     --------->PCF2 --------->MYB59 ---->HVH21<---------At4g35610         <---------ALFIN1     <---------DEAR3(1)  ---------->DOF2  <---   tcgagatgttttccgccgacaagtttgtccgggaagagacaacacctgggttgatccaatgggccgtgaggtttagggcccatgaagctgttaggcctta  9428600       <-----------HVH21      --------->DEAR3(1)      ------->GAMYB     --------->DEAR3(2)     --------->MYB46(3)     <------------AtMYB77    ------>MYB83    -------->P                                                             --------->ICU4    ------>MYB46(1)                                                   --------->ANAC58 ------->ANAC58                             <---------TOE2(3) --------->HSFC1(2) ------->ANAC46                        <------ZmHOX2a(1)     <---------ARR14(2) ------->ANAC58                 --------->ANAC58             --------->ARR14(2) ------->AtLEC2               ---------->DOF2 <------ZmHOX2a(1)       --------->ANAC58 ------ANAC58    --------->ZAT18--------->ANAC58 ----------->GT1    ---------->DOF2          <------- ------ANAC58   <-----------HVH21  ---------->DOF2       <---------------------WRI1  <---------LBD16   catgccaaccgtcgaagaggtcactgaattagtaaagcaaaggattgaggagggttttaagcgaaacttcaaaagcaatgtttcgacttcggaatatgaa  9428700                <---------AHL20(2)                --------->AHL20(2)                                                               <---             --------->AHL20(1)                                                                  <---             <---------AHL20(1)                                                         <----------DOF2             <---------ARR11(3)         <---------ANAC58                             --------->ARR11(3)    <---------YAB1                <---------YAB1                                    <---------CCA1(2)   <---------TOE2(3)   <----------DOF2  <---------ANAC58           <-----------GT1  <---------GLK1(1) --YAB1      --------->ARR11(3) <-----------GT1          ------->TEIL <----------DOF2<---------ARR11(3)   tagttgatgtttgaatattttaatgctttctgtattactattttgtgccaaaacatatgcacttggatttttctttcttctatttgatatctttgtgttt  9428800                                                                                  --------->MYB52(2)                                                                              ----------->GT1                                                                              <------MYB83                                                                         <---------AHL20(2)                                                                        <---------YAB1                                             --------->YAB1          <---------YAB1                                <----------DOF2     <-----------GT1  <---------AHL20(2) ------YAB1            <---------MYB52(1)   <-------TEIL             --------->AHL20(2)  --------->AHL20(2) ------AHL20(2)  <---------CCA1(2)     <-----------GT1          <-------TEIL  <------MYB46(1)     ---   ttattgattttgaagcctcatttctcttagttttctttatttcacattcatgttttagcatatagtttcatattattatttggttaattgtttatatata  9428900                                                            --------->bZIP60(2)                                                            --------->ANAC58                                                            <---------TGA1a                                                            --------->TGA1a                                                            <---------O2                                                            --------->O2                                                            --------->ANAC58                                                            --------->ANAC55(2)                                                            --------->ANAC46                                                            --------->ANAC55(1)                                                            <---------ANAC55(2)                                                           <-----------STF1                                               ----------------->AGL2                                               ----------------->AG         --------->YAB1                                               ----------------->AGL1       --------->ANAC58                                             --------->ANAC58<-----------HVH21                   --------->ATHB12          --------->ANAC58<-----------TGA1                  <---------YAB1           ---------->DOF2<---------ALFIN1  --------->ANAC46                --------->TOE1(3)     <----------ID1   <----------ID1       --------->ANAC58                --------->YAB1     --------->DAG2   --------->DAG2          ----------->GT1       <--        --------->AHL20(1)        ====================================bZIP_DOF        --------->CCA1(2)        --------->AHL20(2)        ---------->DOF2  ---------->DOF2          --------->ANAC55(1)   ---        <---------AHL20(2)       =====================================bZIP_DOF     --------->ANAC46   --------->AHL20(2)<---------WOX13(1)    ===========================bZIP_DOF     --------->ANAC58 - -------->GT1   --------->TOE2(3)---------->DOF2   ===================bZIP_DOF     --------->ANAC58<-   ctgaaaaaaataaaataatcttaattggtttatccaaaaggcgagaaaagccaaaaagggacacgtcatactactcactcgtaacaagacacgagttttt  9429000                                     --------->ANAC46                                <----------ID1                          ----------->TGA1             <------------CBF  <---------------------WRI1                              --------->YAB1   --------->YAB1     <---------WOX13(1)                                           --------->MYB46(3)   <-----------GT1   <------------CBF--------->ANAC58                         <---------ATHB12 -------AHL20(2)    --------->ATHB12 --------->ANAC58                       --------->WOX13(1) ------>AHL20(2)  <---------WOX13(1) --------->AtLEC2                     <------ZmHOX2a(2) -------->YAB1   <---------ANAC58 *TSS --------->YAB1         ===================HOX2a_HOX2a --------AHL20(2)<---------ANAC58------>NtERF2                ------>ZmHOX2a(1)--------->YAB1   tttaataacaaaatgaattgagtgattgatgacgacgacaagcaaaatgcaaaatcgctgtctccttcatgcttcgatcaatcaaaccatcatcaaaccc  9429100                                                                                           <-------GAMYB                                                                                         <------NtERF2                                                                                       --------->ALFIN1                                                                                     <------MYB46(1)                                                                                     <------MYB83 ---                                            <---------At4g35610                      <---------ANAC46                                            --------->At4g35610                      <---------ANAC58            ------>MYB46(1)      <------NtERF2                                       <---------ANAC58            ------>MYB83        --------->RAP2.6(2)                                 <---------DEAR3(1)           --------->MYB52(1) <---------At4g35610                                   --------->MYB46(2)           ----------->RAV1(1)--------->At4g35610--------->ZAT14                    --------->MYB55(2)          --------->AtMYB61<------ZmHOX2a(1)--------->ZAT2                          <---------MYB46(3)  ---------->DOF2     ------>ZmHOX2a(1)     <---------ZAT2    ----------->GT1   --------->ALFIN1 <---   ataagaaagagaccaacagtgttcctgtaggaagcggcaaacttgcagctctgttctcttgaaatggagaaaacagtgagatgtgttcggtggggttatg  9429200                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                         --------->DEAR3(1)                       <---------ICU4                  <---------ANAC46                                --------->YAB1                  <---------ANAC58                               <---------ATHB12                  <---------ANAC58                     <-------TEIL<-----------GT1           ----------->RAV1(2)                        --------->ARR14(2)           <---------At4g35610                        <---------ARR11(3)    <-----------GT1   <---------AtLEC2   ------>ZmHOX2a(1)<<<<<<<<<TBF1 -------->GT1   <---------YAB1     <-----------GT1    <---------ARR14(2) ------TOE2(3)<---------At4g35610 --------->AHL20(2) <---------GLK1(2)    <----------DOF2--------->YAB1   aggttaatacctcttctgatgcttgcatcgacgcaattaactcctattttcaacaggttcttcttcaattatccctcttttagtcactgaaacatcatga  9429300             ----------->GT1             <---------MYB46(3) <---------ARR11(3)         <---------HSFB2a(1)    <---------GLK1(2)       <<<<<<<<<<<<<<<<<LFY     --------->ARR11(3)<---------TOE1(3)                         ---------   <---------WOX13(1)         <---------TOE2(3)   <---------TOE2(3)                       ---------->DOF2 --------->ATHB12 --------->REM1(1)     --------->AtLEC2<-----------GT1                <---------TOE2(3)   aattgattggaacattggttacaacagggcttaagattttcgatgcaaaattgaggtttttctctatggaatctagatggggtttcattaagaaaagtat  9429400                 --------->YAB1                                                                     -                 --------->AHL20(2)                                                                 -                <---------ATHB12                                                                   <-     <---------AHL20(2)                                                                         <----  --------->AHL20(2)                                      --------->ANAC55(2)                  <-----  <---------AHL20(2)                                      <---------ANAC55(2)              ------>ZmHOX2a(2) --------->AHL20(2)         <---------ANAC58      ------->TEIL                            <------ZmHOX2a(2) <---------AHL20(1)         <---------ANAC58   <---------YAB1                            --------->ARR11(3) <---------AHL20(2)   <---------AHL20(2)    <---------AHL20(2)                       <-----------GT1- -->GT1       --------->WOX13(1)        <---------ICU4   <-------TEIL        ------->TEIL<---------ARR11(3)   caatttttttattcttcaatcaaatttatggctagggtttgatcattttatgaatttgatacgtttttgagtcactatgtagcttaattacgatcttgtg  9429500  Previous    Next  AGI:  At1g27140.1    Description:  ATGSTU14 (GLUTATHIONE S-TRANSFERASE 13); glutathione transferase. similar to ATGSTU13 (GLUTATHIONE S-TRANSFERASE 12), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G27130.1); similar to unknown [Populus trichocarpa] (GB:ABK95417.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, N-terminal (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046) Range:  from: 9427845    to: 9428703    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g27150.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G27110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41008.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) Range:  from: 9429034    to: 9432261    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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