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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                          <---------GLK1(2)
                                          --------->KAN4(2)
                                       <---------ALFIN1
                                     --------->LBD16
                             >>>>>>>>>RAP2.2
                           <---------ARR11(3)
       <---------MYB52(1)  --------->ARR11(3)                                       --------->DAG2
      <-------GAMYB--------->TOE2(3)--------->ANAC46                               ---------->DOF2
      <---------At4g35610 --------->CCA1(1)            --------------->AGL15<---------DAG2
      --------->At4g35610 --------->RVE1(1)      --------->YAB1             <----------DOF2
 
tgtgttttcagttggctattagcctcaaaatatctaaaaccggcacattctctcataactagtttttgtaatgcagtcactttacaaaaagtaatagatg  9425000
                                                                    <<<<<<<<<<<<<<<<<LFY
                                                                    >>>>>>>>>>>>>>>>>LFY
                                                                   --------->ANAC58
                                                                   --------->ANAC46
                                                                   --------->ANAC58
                                                              --------->At5g28300
                                                             <------MYB83
                                                             <------MYB46(1)               ---------
                                                             ----------->GT1             <-------TEIL
                                                             <---------DEAR3(2)   <-----------HVH21
                                                            --------->MYB59      <---------bZIP60(1)
                                                            --------->MYB46(2) <-------GAMYB
                                        <-------TEIL       <---------ORA47(1) --------->ALFIN1<-----
                                    <---------TOE2(3)    <------MYB46(1)    <---------ANAC58  <-----
                                    <---------TOE1(3)    <------MYB83       <---------ANAC58  ------
    ---------->DOF2                 --------->DAG2      <---------AtMYB61   <---------ANAC46 <------
 <---------ZAT6            ---------->DOF2      --------->CCA1(2)---------->DOF2 --------->bZIP60(1)
 
ccaagtgtaaagagctaaggtccaaaaaaaaaaagagctaaggtgcaagagatttgagggaggtcggtaaaagccattggtgtgttgtcacgttcaatca  9425100
                                                                                              ======
                                                                                              ------
                                                                           ------->GAMYB--------->ANAC58
                                                                          --------->MYB46(3) -------
 <---------AtLEC2                                                        --------->ANAC58  =========
>WOX13(1)                                                       <---------At4g35610     --------->ANAC46
----ICU4                                                        --------->At4g35610     --------->AtLEC2
---HAHB4                                  --------->DAG2     <---------At4g35610        --------->ANAC58
--->YAB1                                 ---------->DOF2  <------ZmHOX2a(1)--------->AtMYB61 -------
---ATHB12                  <---------MYB46(3)           --------->MYB59  --------->ANAC58  ---------
 
ttttgcatagaatattggaagataaactggatgttggcaaaaaaaaaagtatagcaagttaggaagcagctaatgcaaccaaaactctctcatgcaacaa  9425200
                         <------NtERF2
                       <---------DEAR3(1)
                       --------------->AtSPL3
                      <---------ABI4(1)
                      <------NtERF2
                      --------->ATERF1(1)
                     ------>NtERF2
                     <---------RAP2.3(1)
                     <---------ORA47(2)
                     <---------ERF1
                     <---------DEAR4(2)
                     <---------ATERF1(1)
                     <---------RAP2.6(1)
                     <---------RRTF1(1)
                    <---------RAP2.6(2)
                    <---------ATERF1(2)
                    --------->ATERF1(2)
                    <---------ANAC46
                    --------->DEAR3(1)
                    <---------RAP2.3(2)
                    <---------RAP2.3(3)
                    <---------RRTF1(3)
                    <---------RRTF1(2)
                    <---------DEAR3(1)
                    --------->ALFIN1
                   <---------At4g35610
                   --------->ATERF1(1)
                   --------->DREB2C(1)
                   <------NtERF2
                   --------->DEAR4(2)
                   <---------ABI4(1)
                   --------->At4g35610
                   --------->RAP2.3(1)
                  ------>NtERF2
                  <---------ATERF1(1)
                  <---------RAP2.6(1)
                  <---------ERF1
                  <---------ORA47(2)
                  <---------RAP2.3(1)
                  <---------DEAR4(2)
                 <---------DREB2C(2)                                           --------->At4g35610
                 <---------RRTF1(3)                                            <---------ZAT2
                 <---------RRTF1(2)                                            <---------At4g35610
                 --------->ALFIN1                                              --------->ZAT2
                 <---------RAP2.3(3)                                          <-----------RAV1(1)
                 <---------RAP2.6(2)                                    <---------ARR14(2)
         ----------->RAV1(2)                           <---------MYB46(3)  <-----------RAV1(1)
        -------->P<---------RRTF1(1)               --------->ATHB12     --------->ARR14(2)   <------
 <---------ICU4  <---------DEAR3(1)               --------->ICU4     --------->ANAC55(2)     -------
=====================RAV <---------SPL7      ----------->GT1         <---------ANAC55(2)     -------
----->RAV1(1)    <---------RAP2.3(2)         <------MYB46(1)        <---------ICU4           <------
-->REM1(1)      --------->ATERF1(1)          <------MYB83           --------->YAB1           <------
=====================RAV<---------DEAR3(2)  --------->MYB59   ----------->RAV1(1) <---------At4g35610
-->MYB46(3)  ---------->DOF2             <---------ARR14(2)   --------------->AGL15          -------
-->RAV1(1)--------->TOE1(3)--------->SPL7--------->ARR14(2)   <---------------AGL15         --------
 
caaaacattgcaacctgaaggcggcggcggtactacaatttttggatttggtaaacattggttagccacaataagtatttgctgctgcggtccaaatata  9425300
                                                                            <---------ANAC58
                                                                            <---------TOE1(1)
                                     <---------HSFB2a(1)                    <---------ANAC46
                          <---------AHL20(2)                                --------->ANAC55(2)
     ------>ZmHOX2a(1)    <---------YAB1                                    <---------ANAC55(2)
---AHL20(2)              <---------AHL20(1)                                 <---------ANAC58
-->AHL20(2)              --------->AHL20(1)       ---------->DOF2          <-------TEIL
-->AHL20(1)              --------->AHL20(2)    --------->TOE2(3)        <------MYB46(1)
---AHL20(1) <---------TOE1(2)        <---------HSFC1(2)                 <------MYB83
---ARR11(3) <---------TOE2(2)        --------->HSFB2a(1)               <---------------AtSPL8
-->ARR11(3)------>ZmHOX2a(1)         --------->HSFC1(2)                --------->MYB59
->AHL20(2)<---------TOE1(1)--------->YAB1    <---------ATHB12  <---------YAB1         --------->AHL20(2)
 
ttcaactcctagtcctaggtaactaaaatataatagtagaaaattccaaacattaaagccatcactatatttgataggtacgtggtcgataaaatagata  9425400
                                ------>MYB46(1)
                              <---------MYB111(1)
                              --------->MYB46(3)
                              ------->PIF5
                              <---------MYB55(2)
                              <-------PIF5
                             --------->ZAT2
                             <---------ZAT2
                             ----------->RAV1(2)
                             <---------At4g35610
               --------->WRKY38(1)
               --------->WRKY12 ------>MYB83
             <----------DOF2 --------->At4g35610
         <---------ALFIN1   ------>NtERF2
      --------->ANAC46     <---------ALFIN1
     <---------ZAT18      --------->MYB46(3)          <---------ICU4
     --------->ZAT18     --------->At4g35610  --------->ANAC46                            <---------AHL20(2)
     <---------ZAT14    --------->ANAC46      *TSS   ------>ZmHOX2a(1)               <---------AHL20(2)
     --------->ZAT14  --------->At4g35610     --------->ANAC58     ------>ZmHOX2a(1)--------->AHL20(2)
   --------->ZAT14    <---------At4g35610     --------->ANAC58<----------DOF2       --------->YAB1 <
 
actcagagtacaccacctttgactcatcagccacctgccaacgagaaacacgactcctaattccactttcctccctcactcactctattatatataaaca  9425500
                                                                                                 <--
                                               --------->AHL20(2)                               ----
                                               --------->YAB1                                 <-----
                                          <------ZmHOX2a(2)                                   <-----
                                        --------->At4g35610                            --------->At4g35610
          <---------MYB59          --------->YAB1                                      <---------At4g35610
      ----------->HVH21   <----------DOF2--------->AGP1                             ---------->DOF2
-----------GT1    --------->ANAC46<---------YAB1                                    xxxxxxxxxxxxxxx>smallRNA(le3)
 
aatcacactctgacctaaaacaaacaactctttaactatcatcagatcaataaaaaccagaagaagtcatggctcagaacgatacagtgaagctgatagg  9425600
                                      --------->ZAT14
                               --------->ALFIN1
                             --------->ALFIN1
                            ------->PIF5
                            <-------MYC4
                            ------->MYC3
                            <-------PIF4
                            <-------MYC3
                            ------->PIF4
                            ------->MYC4
                            ------->MYC2
                            <-------PIF5
                            <-------MYC2
                           <---------ANAC55(2)
                           <---------O2
                           --------->ANAC55(2)
                           <---------ANAC46
                           --------->O2
                           --------->TGA1a
                           <---------TGA1a
                          ------------>OsbHLH66
                         <------------OsbHLH66                                                     -
                        <---------ZAT18       <---------GLK1(1)                                    -
-----TEIL               --------->ZAT18<---------ALFIN1                                            <
----->ARR11(3)      --------->STY1(1) <---------ZAT14 <---------------AtSPL3                --------
-MYB83             <---------MYB52(1) <---------REM1(2)                    ----------->RAV1(2)     <
-MYB46(1)  <---------MYB52(1)<-----------RAV1(1)   <-----------HVH21      ------->TEIL ---------->DOF2
 
ttcttggtctagcccttattcccttagggcacgtgtggctctacacttgaaatctgtcaagtacgagtacttagacgaacctgatgttcttaaagaaaag  9425700
             <-----------ARR10
      ------>ZmHOX2a(1)                      ------>ZmHOX2a(1)
 --------->GLK1(1)                --------->HSFB2a(1)
-------->ZAT14                --------->ANAC58
-------->ZAT18      ------->GAMYB <---------HSFB2a(1)                                            ---
---------ZAT14    -------->P  --------->ANAC46                                                   <--
-->DOF2     <---------CCA1(2) --------->ANAC58                                                   <--
---------ZAT18   <-----------GT1---------->DOF2 ------>ZmHOX2a(1)                  -----------------
 
agtgaactccttctcaaatctaaccccatccacaagaaagtccctgtcctcctccatggtgacctctccatctctgagtccctcaacgttgttcaatacg  9425800
                                                       --------->At4g35610
                                                       <---------At4g35610
                                                      ------->TEIL
                                                      <-----------ARR10
                                                      <---------ARR14(2)
                                                  <---------LBD16
     <---------ANAC58                            ------>ZmHOX2a(2)
     <---------ANAC58                        <---------YAB1
<---------O2                         <---------At4g35610
------>DEAR3(1)                   ----------->RAV1(2) --------->ARR14(2)
-------DEAR3(1)              ===========================HOX2a_HOX2a
-------ETT(2)                ------>ZmHOX2a(1)--------->YAB1                              ----------
---->WRI1        <---------MYB52(1)  --------->At4g35610  --------->ZAT2            ----------->HVH21
 
tcgacgaggcttggccctccgttccttcaatccttccttctgatgcctatgatcgcgcatctgctcggttttgggctcagtacatcgatgacaaggtaaa  9425900
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AGI:  At1g27130.1   
Description:  ATGSTU13 (GLUTATHIONE S-TRANSFERASE 12); glutathione transferase. similar to ATGSTU14 (GLUTATHIONE S-TRANSFERASE 13), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G27140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41004.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, N-terminal (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046)
Range:  from: 9425447    to: 9426873    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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