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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
GLK1(2)
--------->
KAN4(2)
<---------
ALFIN1
--------->
LBD16
>>>>>>>>>
RAP2.2
<---------
ARR11(3)
<---------
MYB52(1)
--------->
ARR11(3)
--------->
DAG2
<-------
GAMYB
--------->
TOE2(3)
--------->
ANAC46
---------->
DOF2
<---------
At4g35610
--------->
CCA1(1)
--------------->
AGL15
<---------
DAG2
--------->
At4g35610
--------->
RVE1(1)
--------->
YAB1
<----------
DOF2
tgtgttttcagttggctattagcctcaaaatatctaaaaccggcacattctctcataactagtttttgtaatgcagtcactttacaaaaagtaatagatg
9425000
<<<<<<<<<<<<<<<<<
LFY
>>>>>>>>>>>>>>>>>
LFY
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
At5g28300
<------
MYB83
<------
MYB46(1)
---------
----------->
GT1
<-------
TEIL
<---------
DEAR3(2)
<-----------
HVH21
--------->
MYB59
<---------
bZIP60(1)
--------->
MYB46(2)
<-------
GAMYB
<-------
TEIL
<---------
ORA47(1)
--------->
ALFIN1
<-----
<---------
TOE2(3)
<------
MYB46(1)
<---------
ANAC58
<-----
<---------
TOE1(3)
<------
MYB83
<---------
ANAC58
------
---------->
DOF2
--------->
DAG2
<---------
AtMYB61
<---------
ANAC46
<------
<---------
ZAT6
---------->
DOF2
--------->
CCA1(2)
---------->
DOF2
--------->
bZIP60(1)
ccaagtgtaaagagctaaggtccaaaaaaaaaaagagctaaggtgcaagagatttgagggaggtcggtaaaagccattggtgtgttgtcacgttcaatca
9425100
======
------
------->
GAMYB
--------->
ANAC58
--------->
MYB46(3)
-------
<---------
AtLEC2
--------->
ANAC58
=========
>
WOX13(1)
<---------
At4g35610
--------->
ANAC46
----
ICU4
--------->
At4g35610
--------->
AtLEC2
---
HAHB4
--------->
DAG2
<---------
At4g35610
--------->
ANAC58
--->
YAB1
---------->
DOF2
<------
ZmHOX2a(1)
--------->
AtMYB61
-------
---
ATHB12
<---------
MYB46(3)
--------->
MYB59
--------->
ANAC58
---------
ttttgcatagaatattggaagataaactggatgttggcaaaaaaaaaagtatagcaagttaggaagcagctaatgcaaccaaaactctctcatgcaacaa
9425200
<------
NtERF2
<---------
DEAR3(1)
--------------->
AtSPL3
<---------
ABI4(1)
<------
NtERF2
--------->
ATERF1(1)
------>
NtERF2
<---------
RAP2.3(1)
<---------
ORA47(2)
<---------
ERF1
<---------
DEAR4(2)
<---------
ATERF1(1)
<---------
RAP2.6(1)
<---------
RRTF1(1)
<---------
RAP2.6(2)
<---------
ATERF1(2)
--------->
ATERF1(2)
<---------
ANAC46
--------->
DEAR3(1)
<---------
RAP2.3(2)
<---------
RAP2.3(3)
<---------
RRTF1(3)
<---------
RRTF1(2)
<---------
DEAR3(1)
--------->
ALFIN1
<---------
At4g35610
--------->
ATERF1(1)
--------->
DREB2C(1)
<------
NtERF2
--------->
DEAR4(2)
<---------
ABI4(1)
--------->
At4g35610
--------->
RAP2.3(1)
------>
NtERF2
<---------
ATERF1(1)
<---------
RAP2.6(1)
<---------
ERF1
<---------
ORA47(2)
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
DREB2C(2)
--------->
At4g35610
<---------
RRTF1(3)
<---------
ZAT2
<---------
RRTF1(2)
<---------
At4g35610
--------->
ALFIN1
--------->
ZAT2
<---------
RAP2.3(3)
<-----------
RAV1(1)
<---------
RAP2.6(2)
<---------
ARR14(2)
----------->
RAV1(2)
<---------
MYB46(3)
<-----------
RAV1(1)
-------->
P
<---------
RRTF1(1)
--------->
ATHB12
--------->
ARR14(2)
<------
<---------
ICU4
<---------
DEAR3(1)
--------->
ICU4
--------->
ANAC55(2)
-------
=====================
RAV
<---------
SPL7
----------->
GT1
<---------
ANAC55(2)
-------
----->
RAV1(1)
<---------
RAP2.3(2)
<------
MYB46(1)
<---------
ICU4
<------
-->
REM1(1)
--------->
ATERF1(1)
<------
MYB83
--------->
YAB1
<------
=====================
RAV
<---------
DEAR3(2)
--------->
MYB59
----------->
RAV1(1)
<---------
At4g35610
-->
MYB46(3)
---------->
DOF2
<---------
ARR14(2)
--------------->
AGL15
-------
-->
RAV1(1)
--------->
TOE1(3)
--------->
SPL7
--------->
ARR14(2)
<---------------
AGL15
--------
caaaacattgcaacctgaaggcggcggcggtactacaatttttggatttggtaaacattggttagccacaataagtatttgctgctgcggtccaaatata
9425300
<---------
ANAC58
<---------
TOE1(1)
<---------
HSFB2a(1)
<---------
ANAC46
<---------
AHL20(2)
--------->
ANAC55(2)
------>
ZmHOX2a(1)
<---------
YAB1
<---------
ANAC55(2)
---
AHL20(2)
<---------
AHL20(1)
<---------
ANAC58
-->
AHL20(2)
--------->
AHL20(1)
---------->
DOF2
<-------
TEIL
-->
AHL20(1)
--------->
AHL20(2)
--------->
TOE2(3)
<------
MYB46(1)
---
AHL20(1)
<---------
TOE1(2)
<---------
HSFC1(2)
<------
MYB83
---
ARR11(3)
<---------
TOE2(2)
--------->
HSFB2a(1)
<---------------
AtSPL8
-->
ARR11(3)
------>
ZmHOX2a(1)
--------->
HSFC1(2)
--------->
MYB59
->
AHL20(2)
<---------
TOE1(1)
--------->
YAB1
<---------
ATHB12
<---------
YAB1
--------->
AHL20(2)
ttcaactcctagtcctaggtaactaaaatataatagtagaaaattccaaacattaaagccatcactatatttgataggtacgtggtcgataaaatagata
9425400
------>
MYB46(1)
<---------
MYB111(1)
--------->
MYB46(3)
------->
PIF5
<---------
MYB55(2)
<-------
PIF5
--------->
ZAT2
<---------
ZAT2
----------->
RAV1(2)
<---------
At4g35610
--------->
WRKY38(1)
--------->
WRKY12
------>
MYB83
<----------
DOF2
--------->
At4g35610
<---------
ALFIN1
------>
NtERF2
--------->
ANAC46
<---------
ALFIN1
<---------
ZAT18
--------->
MYB46(3)
<---------
ICU4
--------->
ZAT18
--------->
At4g35610
--------->
ANAC46
<---------
AHL20(2)
<---------
ZAT14
--------->
ANAC46
*
TSS
------>
ZmHOX2a(1)
<---------
AHL20(2)
--------->
ZAT14
--------->
At4g35610
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
AHL20(2)
--------->
ZAT14
<---------
At4g35610
--------->
ANAC58
<----------
DOF2
--------->
YAB1
<
actcagagtacaccacctttgactcatcagccacctgccaacgaga
aacacgactcctaattccactttcctccctcactcactctattatatataaaca
9425500
<--
--------->
AHL20(2)
----
--------->
YAB1
<-----
<------
ZmHOX2a(2)
<-----
--------->
At4g35610
--------->
At4g35610
<---------
MYB59
--------->
YAB1
<---------
At4g35610
----------->
HVH21
<----------
DOF2
--------->
AGP1
---------->
DOF2
-----------
GT1
--------->
ANAC46
<---------
YAB1
xxxxxxxxxxxxxxx>
smallRNA(le3)
aatcacactctgacctaaaacaaacaactctttaactatcatcagatcaataaaaaccagaagaagtc
atggctcagaacgatacagtgaagctgatagg
9425600
--------->
ZAT14
--------->
ALFIN1
--------->
ALFIN1
------->
PIF5
<-------
MYC4
------->
MYC3
<-------
PIF4
<-------
MYC3
------->
PIF4
------->
MYC4
------->
MYC2
<-------
PIF5
<-------
MYC2
<---------
ANAC55(2)
<---------
O2
--------->
ANAC55(2)
<---------
ANAC46
--------->
O2
--------->
TGA1a
<---------
TGA1a
------------>
OsbHLH66
<------------
OsbHLH66
-
<---------
ZAT18
<---------
GLK1(1)
-
-----
TEIL
--------->
ZAT18
<---------
ALFIN1
<
----->
ARR11(3)
--------->
STY1(1)
<---------
ZAT14
<---------------
AtSPL3
--------
-
MYB83
<---------
MYB52(1)
<---------
REM1(2)
----------->
RAV1(2)
<
-
MYB46(1)
<---------
MYB52(1)
<-----------
RAV1(1)
<-----------
HVH21
------->
TEIL
---------->
DOF2
ttcttggtctagcccttattcccttagggcacgtgtggctctacacttgaaatctgtcaagtacgagtacttagacgaacctgatgttcttaaagaaaag
9425700
<-----------
ARR10
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
GLK1(1)
--------->
HSFB2a(1)
-------->
ZAT14
--------->
ANAC58
-------->
ZAT18
------->
GAMYB
<---------
HSFB2a(1)
---
---------
ZAT14
-------->
P
--------->
ANAC46
<--
-->
DOF2
<---------
CCA1(2)
--------->
ANAC58
<--
---------
ZAT18
<-----------
GT1
---------->
DOF2
------>
ZmHOX2a(1)
-----------------
agtgaactccttctcaaatctaaccccatccacaagaaagtccctgtcctcctccatggtgacctctccatctctgagtccctcaacgttgttcaatacg
9425800
--------->
At4g35610
<---------
At4g35610
------->
TEIL
<-----------
ARR10
<---------
ARR14(2)
<---------
LBD16
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
ANAC58
<---------
YAB1
<---------
O2
<---------
At4g35610
------>
DEAR3(1)
----------->
RAV1(2)
--------->
ARR14(2)
-------
DEAR3(1)
===========================
HOX2a_HOX2a
-------
ETT(2)
------>
ZmHOX2a(1)
--------->
YAB1
----------
---->
WRI1
<---------
MYB52(1)
--------->
At4g35610
--------->
ZAT2
----------->
HVH21
tcgacgaggcttggccctccgttccttcaatccttccttctgatgcctatgatcgcgcatctgctcggttttgggctcagtacatcgatgacaag
gtaaa
9425900
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AGI:
At1g27130.1
Description:
ATGSTU13 (GLUTATHIONE S-TRANSFERASE 12); glutathione transferase. similar to ATGSTU14 (GLUTATHIONE S-TRANSFERASE 13), glutathione transferase [Arabidopsis thaliana] (TAIR:AT1G27140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41004.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, N-terminal (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046)
Range:
from: 9425447
to: 9426873
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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