Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------DOF5.7(2)       --------->REM1(2)      ----------->HVH21      --------->DOF5.7(2)     --------->At5g28300                                   <---------CCA1(2)     --------->LBD16                             <---------ANAC55(1)    <---------ANAC46                             --------->ANAC55(2)  ------>NtERF2                                  <---------ANAC55(2)    --------->At4g35610  --------->ABI4(1)                              <---------ANAC46       ----------->RAV1(2) <---------ALFIN1                                <---------ANAC58       <---------At4g35610 --------->DEAR3(1)                   --------->LBD16    --------->ANAC55(2) --------->DREB2C(2)                 <---------ANAC46    --------->ANAC46 ------->GAMYB                       <---------ANAC58    <---------ANAC55(2)       <-------TEIL -------->DEAR3(2)                   <---------ANAC58   <---------HSFB2a(2) <---------ANAC46 -------->MYB46(3)                  <---------LBD16     <---------LBD16 <---------ZAT2 --------ATERF1(1)             <---------ARR11(3)<---------ANAC58       --------->ZAT2 -------ALFIN1                --------->REM1(1) <-------TEIL        <-----------HVH21 ------ZAT14            <---------GLK1(2)      --------->CCA1(2)   --------->bZIP60(1)              - --->ANAC46             --------->ARR14(2)  <---------YAB1--------->LBD16--------->TOE2(2)      <----   ccaccgccgtgaacgcgaattgtcccgattctacatcttccgcgtgatgatacgtgttcccgtaactcgatgtcacctgcgtaaattcatgttttcaaat  9225400                                                                 ===========================HOX2a_HOX2a                                                                 =====================HOX2a_HOX2a                                                                 ------>ZmHOX2a(2)                                                                ============================HOX2a_HOX2a                                                                <------ZmHOX2a(2)                                                                ======================HOX2a_HOX2a                                                               --------->ARR14(3)                                                               <---------ARR11(3)               ---------->DOF2                                 --------->AGP1           --------->YAB1                                      <---------ARR14(3)           <---------ICU4         <---------GLK1(2)            <---------ARR14(2)          --------->ICU4          --------->ARR14(2)           --------->ARR14(2)        --------->YAB1            <---------ARR14(2)           --------->ARR11(3)                   <       <---------ATHB12    <---------ARR11(3)                 <---------GLK1(1)                    <-       <---------ATHB51    --------->ARR11(3)                 --------->GLK1(1)              <-------TEIL   <---------ATHB12        --------->GLK1(2)       --------->ZAT14                        --------->At4g35610 --------->WOX13(1)    --------->YAB1              <---------ZAT14                   <------ZmHOX2a(1) -------->MYB46(3)    <---------YAB1           <---------------AtSPL8        <---------TOE2(3)     <- -----ATHB12  --------->YAB1  <---------LBD16 <---------ZAT14----------->ARR10 <------ZmHOX2a(1)<----   caacaatcaataataatcaaagttatgaaaatctcggatttttaagagagtagtactctgatggagatcttgtgagattgaggagaaggatgagcttcgt  9225500             <---------ZAT14             <---------ZAT18             --------->ZAT14         <---------DEAR3(1)    --------->MYB52(1)    <-----------HVH21    <---------DOF5.7(2)   --------->At5g28300  --------->DOF5.7(2) ------>NtERF2 ---------ZAT6       ----------->HVH21<---------ANAC58 --------TOE2(3)    --------->HSFB2a(2)<---------DAG2 --------TOE1(3)    <---------HSFB2a(2)<----------DOF2    <-------TEIL -----MYB52(1) ------->TEIL           <---------ANAC58   <-----------GT1                 --------->ALFIN1   tagggttaacgacggtgtacttcccgacggtcattgaattgctttttatgtcttccgatatacattttgttcgaccagattgcaattcgaagtggagaga  9225600                                                                                                    -                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      --------->AGP1-                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3)                                                    --------->ATHB12                 <---------GLK1(1)                                                 <---------ANAC58                    --------->GLK1(1)                                       <---------ZAT14                     <----------DOF2        <--                                       --------->ZAT14 ------>ZmHOX2a(2) <---------HSFB2a(1)     <---                                   <---------------AtSPL8                <---------HSFC1(2)      <---                        <------ZmHOX2a(1)        <---------ANAC58        --------->HSFC1(2)      <---   ttgagaaacttgtgatgaaatcgctaggaagagtagtattgtacagagattgagtgatcggagaaacatggtggaagctttgaagagagatctttggttt  9225700                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                 ------->MYC2                                                                                 <-------MYC3                                                                                 <-------MYC4                                                                                 ------->MYC4                                                                                 <-------MYC2                                                                                 ------->MYC3            <---------AtMYB61                                                   <---------ANAC55(2)            --------->MYB111(1)                                                 --------->TGA1a    ------>ZmHOX2a(2)                                                           --------->ANAC55(2) -------->WRKY38(1)                                                             <--------ABF1 -------->WRKY12                                                                --------->O2 -----GAMYB<--------P                    --------->ARR11(3)   *TSS              <---------TGA1a ------ANAC58        --------->CCA1(2)   <---------ARR11(3) <----------ID1      <---------O2     ---- ------ANAC46<------MYB83             >>>>>>>>>TBF1   <-------TEIL    <---------At4g35610 --------->YAB1 ------ANAC58<------MYB46(1)       >>>>>>>>>TBF1     <<<<<<<<<<<<<<<<<LFY  ----------->HVH21 <-------   cgttgatcgtggagttggtagagagatggaagacgaagaagaagaactcaacaacgtacaatggaacaagagagcttatgacacgtgtttaattttaact  9225800                                                      <----------DOF2                                                   ------>NtERF2         <-----------HVH21                        --------->WRKY12                  ----------->GT1        --------->O2                            <---------At4g35610                 <---------ZAT6        --------->ANAC46                  --------->ANAC55(2)            <------NtERF2 ------->GT1                              <---------ANAC58             --------->ETT(1)    <---------AHL20(2) ----GT1<---------O2    <----------DOF2   <---------ANAC58  <----------DOF2  ----------->RAV1(1)   cgtgaaatacacgtcgaagaaactctctttctcatctagagttttcgtaacgctgactttgacttttagtatgtcgggacaacatagtgttatttttttt  9225900                                       <---------ICU4                                       --------->ATHB12                                       -------->HAHB4                                       <---------AHL20(2)                                       -------->ATHB1                                       --------->ATHB51                                      <---------YAB1                                      <---------ATHB12                                      <---------ATHB51                                      --------->ICU4                                   ------------>ATHB5                           <---------ANAC58         ---------->DOF2   <---------ANAC46      --------->ANAC58     <---------ANAC55(2)      --------->AtLEC2     <---------ANAC55(1)                                                   ----      --------->ANAC58     --------->ANAC55(2)                          --------->ZAT6     <---------     <-------MYC3          <---------ANAC58                    <---------MYB52(1)        --------->AHL20(2)     ------->MYC3        <-----------GT1                  --------->ANAC46           --------->ICU4 -   agtttcacatgcaaagctaaattctatttacgtgtgtctaattattggattccaaagtataagcagttgttttaagtctagttggcacttattaaacagc  9226000                                                                                --------->AHL20(2)           --------->AHL20(2)                                                  <---------AHL20(1)           <---------AHL20(2)    <-----------HVH21                             --------->AHL20(2)       <------MYB83             <----------DOF2                                <---------AHL20(2)       <------MYB46(1)  --------->ICU4                                    <---------MYB59          <-       <---------MYB46(3)   <-----------GT1                              --------->ANAC58         <--    <------ZmHOX2a(1)   <---------YAB1                        <---------AHL20(2)<---------AHL20(2)--- ----->TOE2(3)       <---------ATHB12                 <---------GLK1(1)  --------->ANAC58         <-- --GT1 ----------->GT1--------->YAB1        <----------DOF2 <----------DOF2    --------->AHL20(1) --- --------->DOF2    --------->WOX13(1)<---------O2  <---------YAB1        --------->ANAC46 -----------   ctaaaaggatggtttaaatgtctatcatttttatctttcacatggcctttgttttgatttctcttttatttgtatacccaatttattttcaatagaaaaa  9226100               <---------YAB1          <---------CCA1(1)          <---------RVE1(1)         --------->ARR11(3)         <---------ARR11(3)         --------->ARR14(2)                    --------->ANAC58                                ------         <---------ARR14(2)           --------->ANAC58                                         <-----        <------ZmHOX2a(1)            --------->At4g35610                                    <--------HAHB4      <---------------------WRI1    --------->MYB52(1)                           <----------DOF2      <---------TOE1(3)            <---------WRKY38(1)                           <---------DAG2------ --------AHL20(2)                --------->ANAC46           <----------DOF2     <---------ANAC58 -------AHL20(2)            <-----------GT1    --------->ANAC58         ------>ZmHOX2a(1)   <-------- ------>AHL20(1)           <---------YAB1  --------->At4g35610       <-----------GT1       --------->ICU4 -------AHL20(1)         --------->YAB1    <---------At4g35610      <-----------GT1     <-------TEIL ------>AHL20(2)         <---------ICU4------->GAMYB       <---------ANAC58     <---------ANAC58  <-- >GT1 <---------TOE2(3) --------->ICU4--------->ANAC58     <---------ANAC58  ------>ZmHOX2a(1)-------   taaaatttgaggatattttcaatggaattataactaggcaacggaagctaagccagtatgtgcttgaatttttcctgtccttgctttatgtgcataatta  9226200                                                     ------>ZmHOX2a(1)                                                    --------->TOE2(3)                                                    --------------------->WRI1                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                       --------->ANAC58                                                <------ZmHOX2a(1)                         --------->ANAC46 --->YAB1                                      --------->HSFC1(2)                         --------->ANAC58 ----ICU4                                      <---------HSFC1(2)                       <-----------GT1 -->HAHB4                                      --------->HSFB2a(1)               --------->ANAC55(2) -ICU4                                         <---------HSFB2a(1)             <-----------GT1  <---- -------At4g35610       ----------->GT1 >>>>>>>>>SARD1              ------->TEIL <---------ANAC55(2) -->ICU4           ---------->DOF2      >>>>>>>>>CBP60g         --------->HSFB2a(2)<---------ICU4   tgctgtcaaattgaagaacatgaaagttgaaaatcaattgaaatttggaaggatccttataagtatcgcgaacgtttattgttacttatttcacacaact  9226300  Previous    Next  AGI:  At1g26690.1    Description:  emp24/gp25L/p24 family protein. similar to emp24/gp25L/p24 family protein [Arabidopsis thaliana] (TAIR:AT1G69460.1); similar to unknown [Populus trichocarpa] (GB:ABK93754.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038) Range:  from: 9224132    to: 9225762    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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