Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <---------At4g35610                                --------->At4g35610                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                   <xxxxxxxxxxxxxxxxsmallRNA(i)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                 ---------->DOF2        ----------->GT1 --------->ANAC46                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      ---------->DOF2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <---------HSFB2a(2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)               --------->YAB1         <---------LBD16 <xxxxxxxx   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <xxxxxxxx   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------MYB52(1)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ----------->RAV1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------>ANAC58      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ------>ANAC58   xxxxxxxxxxxxxxxx>smallRNA(i)    --------->ZAT6            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -TOE2(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<-----------GT1  ---------->DOF2xxxxxxxxxxxxxxxx>smallRNA(i)   aagcaacacaaagtgaaacacaatctactcaagcagctactacggtatttaactctaataaacgcttaaagtttgatgttcggaaagagtttagacccat  9205400                                                                                                -----                                                                                              <------                                                                                           <---------YAB1                    --------->ZAT6                                                       -------->ATHB1                    <-----------GT1                                                      <---------ICU4                  <-----------GT1                                                       --------->AHL20(2)              <---------RVE1(1)                       <----------DOF2                <---------AHL20(2)             --------->ARR11(3)                    --------->GLK1(2)                 --------->AHL20(2)             <---------GLK1(2)                    <---------GLK1(2)     ----------->GT1 --------->ICU4             <---------ARR11(3)                --------->YAB1           <---------ANAC46<---------AHL20(2) xxxxxxxxxxxxxsmallRNA(s2)<----------DOF2  <---------AHL20(2)        <---------MYB52(1) <---------ATHB51 xxxxxxxxxxxxxxxsmallRNA(fl3)              --------->AHL20(2)   --------->GLK1(2)   --------->AHL20(2)   gttagaagttgtttagattttttcactacttttgtatttctgttttaaattagaatctttgatgaaattctgttttgtataatcttttaaattattaatg  9205500                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                              ---------->DOF2                                             <---------AHL20(2)                                             --------->AHL20(2)  <---------TOE1(3)                                         --------->AHL20(2)      <---------TOE2(3)                                    <---------YAB1   --------->AHL20(2)      ---------->DOF2                                  <----------DOF2    --------->YAB1----------->GT1 <---------ANAC46   <---------AHL20(2)   <---------AHL20(2)     --------->MYB52(1) ---->ATHB12       --------->AHL20(2)   <---------AHL20(2)  <---------------AGL15 ---TOE2(3)        <---------AHL20(2)   --------->AHL20(2)  --------->WOX13(1)          <-----------GT1   tttgagtgaattttggatttataaatttgttagaaactttgattaaattaaagaattaaaatcaattaagggtaacaaataaagttttttatacaaaata  9205600                                                                               --------->ARR11(3)                                          <---------AHL20(1)                   <---------ARR11(3)                               --------->At5g28300                            --------->CCA1(1)                --------->AHL20(2)        --------->AHL20(1)                  --------->RVE1(1)                <---------AHL20(2)   --------->AHL20(2)                   --------->AHL20(2)      <---------YAB1 <-------TEIL    <---------AHL20(1)       --------->AHL20(2)    <---------ANAC55(2)       ----------->GT1                 <---------AHL20(2)       --------->AHL20(2)    --------->ANAC55(2)   ----------->HVH21     <-----------HVH21        <---------AHL20(2)   <-------TEIL--------->AHL20(2)    --------->AHL20(1)  ----------->GT1--------->AHL20(2)   caaaatacatgattcaatttaaatacatatgacagtgaatataatatatatgtcaaatacagaaataaatacaatttaaaatatctatataaaatacagt  9205700                                                                        ----------->RAV1(1)                                                                     <---------ALFIN1                                                                   ------>MYB83           --------->YAB1                                                                   ------>MYB46(1)<---------TOE2(3)                                                                  --------->MYB55(1)--------->YAB1                                                                  --------->ANAC46<---------TOE1(3)                                                                 --------->MYB46(3) <------ZmHOX2a(1)                                                                 <---------MYB55(2)----------->GT1                                                              <-----------GT1   ------>ZmHOX2a(1)   -                                                      <------------CBF --------->ANAC46   -------->HAHB4         ------>ZmHOX2a(1)  <---------ANAC58     <---------At4g35610 --------->AtMYB61   <---------YAB1         <----------DOF2    <---------ANAC58     --------->At4g35610--------->MYB46(3) --------->YAB1   ttttttgaatccttttttttttatgaagaggcctgttttgagtttgggctgggctgaattgtttttacccaccacaacattcctaaggataataatacag  9205800                          ------>ZmHOX2a(1)                                                <---------                       *TSS                                                      <---------TOE2(3)                       ------>MYB46(1)                                 --------->ZAT14     ----------                       ------>MYB83                               <---------ZAT18<---------TOE1(2)                     --------->AtMYB61        --------->AHL20(2)<---------At4g35610       <---------- --------->TOE1(3)<---------ALFIN1       <---------AHL20(2) <---------DAG2       <---------TOE2(2) -------->ZAT6  ------>ZmHOX2a(1)    ------>ZmHOX2a(1)      <----------DOF2    <---------MYB52(1)   taaccctagaaaggtttcctccaccttcctcttcccctcctatataaaaaaaatcgacatcgcttttgctcacttctctctcttaggttttttttccctt  9205900                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                          --------->LBD16                                                                                      --------->GLK1(2)                                                                                      <---------ARR14(2)                                                                     <---------ALFIN1 --------->ARR14(2)                                                                --------->ANAC58     <---------ARR14(1)                                                                --------->ANAC58  <------NtERF2 --GT1                                                     <---------ETT(2)       <---------At4g35610 >ID1                                                   ----------->HVH21     ------>NtERF2 --------- -GT1            --------->LBD16                        ----------->TGA1<----------DOF2 <---------LBD16   ctcccaatctcatcttctccgaaaacctttcttctctcaaatttctgtgaaaacatgtctgacgacgagcaccactttgaggccagcgaatccggagctt  9206000      --------->ARR14(2)      ------>MYB46(1)      <---------ARR14(2)      ------>MYB83    --------->AtMYB61             --------->DAG2  <---------ARR11(3)             --------->DAG2 --HSFC1(2)             ----------->ARR10 --HSFB2a(1)         <---------MYB52(1) --ZAT2              --------->At5g28300 ->HSFC1(2)         --------->LBD16    <-----------HVH21 --At4g35610        ----------->GT1  --------->ALFIN1 ->At4g35610       --------->ATERF1(2)<---------MYB46(3)               <---------ARR11(3) ->ZAT2  --------->TOE2(3)   --------->TOE2(3)              <-----------HVH21 ->HSFB2a(1)  <---------ATHB12  ---------->DOF2            --------->DEAR3(1)--------->GLK1(1)  ----- -ARR14(2)  --------->WOX13(1)--------->LBD16  <-----------TGA1  --------->AtLEC2        <---------ICU4 >ARR14(2)------>ZmHOX2a(1)  <---------ANAC55(2)          <------------AtMYB77           --------->YAB1   ccaagacctatcctcaatcagccggtaacatccgtaaaggtggtcacatcgtcatcaaaaaccgtccctgcaaggtctgatttctatttcatcatcaaac  9206100                                  <---------CCA1(2)                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <---------AGP1                            <---------ARR11(3)                            <---------ARR14(2)                            --------->ARR14(2)                     <---------GLK1(2)                   ==================HOX2a_HOX2a                   =================HOX2a_HOX2a                                 ----------->RAV1(2)                   ------>ZmHOX2a(1)     --------->ZAT14                     ----------->HVH21         =================HOX2a_HOX2a    <---------ZAT14                  <---------ARR14(2)         ------>ZmHOX2a(2)  --------->ARR11(3)                            --------->ARR14(2)    <---------HSFB2a(2)  <---------HSFB2a(2)                           --------->TOE1(1)    --------->HSFB2a(2)  --------->HSFB2a(2)                          <---------LBD16 ---->YAB1  <----------DOF2<---------CCA1(2)                          ------>ZmHOX2a(1)   atcgttctcgatctctttttcctgattctagatctcgtctctgtatagtagctccttgattttgtttttatcctcggatttgacctggttctgtttagtt  9206200                                                                               <---------LBD16                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                              <---------ANAC46                                                             <---------------AtSPL3                                                             --------------->AtSPL8                                                             --------------->AtSPL3                                                             <---------------AtSPL8                                      ------->TEIL        <---------AtMYB61  <-------TEIL                                   <---------YAB1      <---------YAB1      <---------ARR14(2)                             ------->TEIL        <---------MYB52(1)        <---------GLK1(2)               ------>ZmHOX2a(2)<---------YAB1 ----------->GT1<---------MYB46(3)       <---------YAB1   --------->At4g35610    ------>ZmHOX2a(1)           --------->ARR14(2)   -----   tgaatttttcttatagatcgctacttagatgaatatgatgaatcttatcctgttattttgatggtggtacctctctagattcgtggaattttgggaaatg  9206300  Previous    Next  AGI:  At1g26630.1    Description:  FBR12 (FUMONISIN B1-RESISTANT12); translation initiation factor. Identical to Eukaryotic translation initiation factor 5A-2 [Arabidopsis Thaliana] (GB:Q93VP3;GB:Q9LQY9); similar to eukaryotic translation initiation factor 5A, putative / eIF-5A, putative [Arabidopsis thaliana] (TAIR:AT1G69410.1); similar to eukaryotic translation initiation factor-5A [Brassica napus] (GB:AAR91929.1); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain KOW (InterPro:IPR005824); contains InterPro domain Translation protein SH3-like, subgroup (InterPro:IPR014722); contains InterPro domain Eukaryotic initiation fac Range:  from: 9205823    to: 9207370    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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