Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <<<<<<<<<<<<<<<<<LFY                    <-----------TGA1                    <-----------HVH21                   --------->bZIP60(1)                   ===================================MYC_MYB                   --------->O2                   <---------O2                   --------->TGA1a                   --------->bZIP60(2)                   <---------bZIP60(1)                   --------->ANAC58                   --------->ANAC46            <--------P                     --------->ZAT14       -              ------->GAMYB                    <---------WOX13(1)             <---------ZAT14       <              ===============MYC_MYB         <---------MYB46(3)               --------->ZAT18       -            --------->RAP2.6(3)              <------MYB83--------->ZAT2 --------->GLK1(2)        <---           <---------DOF5.7(2)               <------MYB46(1)            ------->TEIL    <---------ALFIN1     --------->At4g35610                    <---------AtMYB61      --------->At4g35610 <---------At4g35610     <---------At4g35610   --------->ALFIN1 --------->MYB59    <-----------HVH21       --------->At4g35610 ------YAB1--------->MYB52(1) <---------ARR14(2)        --------->ANAC58<---------ARR14(2) --------->DEAR3(1) ---------AGL15    --------->ANAC58      <---------MYB46(3)    <---------MYB52(1)  <-----------HVH21< -------->AGL15  <---------DOF5.7(2)    --------->ALFIN1--------->ANAC58--------->ARR14(2) <---------ALFIN1 ----DOF2--------->DOF5.7(2)<---------MYB46(3)<-------GAMYB <---------LBD16   <---------ZAT18  ------   tgatagtagctgttaacggcaacgtcacagtggttcttgagggtgtttggttgataacaagctccggtcgtctgaatctgtgcacagtcagcacctcctc  9149800                                                                ------------------>SPL14                                                          ===============MYC_MYB                                                          ------->GAMYB                                        <---------ZAT18   --------->DEAR3(1)                                       <---------ANAC58   --------->ANAC46                                     <---------DOF5.7(2) --------->MYB46(3)                                   --------->DOF5.7(2)   <------------AtMYB77                                   <---------MYB52(1)    --------->DEAR3(2)                              <---------ZAT2             <---------MYB55(2)                          <------ZmHOX2a(2)        --------->ANAC46                          =========================HOX2a_HOX2a --------->O2         <---------LBD16                          --------->CCA1(2)        --------->ANAC58              --------->ARR11(3)          --------->WOX13(1)  <---------At4g35610  --------->ANAC58       --------->MYB52(1)<-------- ------>MYC2             --------->AGP1<---------ANAC58  ================MYC_MYB <---------ARR11(3) -------MYC2             <---------ARR11(3)     <---------ZAT18--------->TGA1a  <---------GLK1(1) ------>MYC3             --------->ARR11(3)  --------->AtLEC2 ------>NtERF2     --------->GLK1(1) ------ALFIN1            --------->ARR14(2)<---------ANAC58   <------NtERF2     <---------RVE1(1)   - -------MYC3             <---------ARR14(2)<---------ANAC58   --------->LBD16  <---------ARR11(3)   - >ZmHOX2a(1)    <---------DAG2--------->ZAT2------>ZmHOX2a(1)--------->DEAR3(1)--------->ARR11(3)   -   cacatgcgaagtctatcaccttctgaagatccagctcgttagcgtccttgcacacacaaaccgccgcgtctgtacaaaacagatatctcggattagcatt  9149900                                                                                               <-----       --------->ANAC58                                                                        ------       --------->ANAC55(2)                                                                    <------       --------->ANAC58                                                                       <------       --------->ANAC55(1)                                                                    <------       <---------ANAC55(2)                                                                    <------ -YAB1 --------->ANAC46                                                             ---------->DOF2 -------->ANAC58                                              <---------------------WRI1<---------ARR11(3) -------->ANAC58             --------->ETT(1)                ---------->DOF2     --------->CCA1(2) -------->ANAC46---------->DOF2 --------->ARR14(2)       <----------ID1  ---------->DOF2--------->ARR11(3)   acaaggaaaacgtaaccaagaagcgaaaatgtcggaaccattttgagtcttaatgccaagggacaaagaaatgttcaaagaagatagaaagaacttactt  9150000                                              ----------->HVH21                                         --------->DEAR3(1)       --------->ICU4                    --------->ANAC46  ----------->GT1                        --------->RAP2.6(2)  <---------ANAC55(2)                    ------->GAMYB ----------AGL15                        --------->MYB46(3) --------->AGL15                      <---------ARR14(2) ---ANAC58                            --------->ARR14(2)        ------>ZmHOX2a(2) -----------AG                   --------->ANAC58    <----------DOF2               --------------->AtSPL8 ---ANAC58  ---------->DOF2      --------->ANAC58  --------->At4g35610       --------->ZAT6 -----------AGL1               <------ZmHOX2a(1)--------->RAP2.6(3)     ---------->ARF1   gaataggtaaacatgaaagagagaagaaacagaggaagcaaaaccgccatgactgcttaaacttgatcggacttgtctaacactgagagtaccacaaatg  9150100                                         --------->YAB1                       <---------ANAC58                                        <---------YAB1                    <---------ANAC58                                   <---------YAB1                         <---------ANAC46                              <---------KAN4(1)                     --------->ARR11(3)           <---------MYB46(3) --------->KAN4(1)                     <---------ARR11(3)        ------------>MYB.PH3(2)--------->KAN4(2)              <----------DOF2 <---------ANAC58-------     <---------ANAC58        <---------KAN4(2) ------>ZmHOX2a(2)   --------->YAB1        --------->At4g35610     <---------ANAC46    =============================HOX2a_HOX2a <---------YAB1    --------->YAB1     <---------ANAC58    <------ZmHOX2a(1) <---------YAB1<-----------GT1  <---------ANAC58--------->YAB1   tgagtttgcgagtttgttagagagagaggagattattctgatatgatgatcgacaatttatactctttatgatatttcttgggtactaataagcagaata  9150200                                           <---------ANAC58                                      <---------At4g35610                                      --------->At4g35610                                     *TSS  <---------ANAC58                                   <---------ANAC58                                <---------GLK1(1)                             <---------YAB1<---------ANAC46                       <---------PCF2                             <---------AHL20(2)                          ------------>CBF                           <---------CCA1(1)                            --------->ANAC58                          <---------ARR11(3)                            --------->ANAC46                          --------->ARR11(3)                            --------->ANAC58                  --------->DAG2   <---------ANAC58                   ---------->DOF2                 ---------->DOF2   <---------ANAC46      --------->ARR11(3)    --------->ALFIN1    -- -->ARR14(2)---------->DOF2<---------RVE1(1)             <---------GLK1(2)   <-----------RAV1(1)  ---   ccctaaggcttaagtaaagaaaagttcagatattattgtgtgatgacttgtaaatgttagattttgagtactcaaagcaatgtgggtctctgaaacagag  9150300                                                     --------->ANAC46                                                     --------->ANAC55(1)                                                     <---------ANAC55(2)                                                     --------->ANAC55(2)                                                     --------->ANAC58                                                     --------->ANAC58                                                    ------->TEIL                                                 --------->ANAC58                                               <---------ATERF1(1)                                              <---------WRKY38(1)                                              <---------WRKY12                                              <---------DEAR3(1)                                              <---------ETT(2)                                            <-------GAMYB                                           <------MYB46(1)                                           <---------DEAR3(2)                                           <------MYB83                                          <---------DEAR3(1)                                          <---------DREB2C(2)                                          <---------MYB46(3)                                       <---------MYB46(3)                 <---------ANAC46     --------->ALFIN1      --------->ANAC58                <---------AtMYB61      --------->ANAC58        --------->ALFIN1--------->ETT(2)                                      <    ---------->DOF2     ------------>CBF <---------ORA47(1)                                      <--- --------->GT1 <-----------HVH21    <-----------RAV1(1)                                 ----------->GT1 ------>DAG2  ------>ZmHOX2a(1) ----------->HVH21--------->ANAC58   <----------DOF2   <----------DOF2   aaggtgaaaagcattcctgtcgtctagtcaatgtgtgactgtggtcggtcgacgcacgtaatattgtaggctttatgtgaaaaactagctttgttaattg  9150400                                   ----------->HVH21                                 ----------->RAV1(2)                                 <---------At4g35610                              ------->TEIL                                                       <---                           <---------ANAC55(2)                                        ----------->RAV1(1)                           <---------ANAC46                                          <----------ID1--                           <---------ANAC58                                     =====================                           --------->ANAC55(2)       <------ZmHOX2a(1)   ============================                           <---------ANAC58  <----------DOF2             <----------DOF2         <---                          --------------->AtSPL3   <---------TOE2(3)    <---------ANAC58  ---------->DOF2 ---------YAB1   <---------ANAC55(2)--------->At4g35610      --------->CCA1(2)  ---------->DOF2 <---- ------YAB1  <-----------HVH21<-------TEIL   <---------------AGL15      <---------ANAC58  ===========   ttattcttactaatttgtcacctaagtttacgtacatctgatgcattcttttttaggatttagataagagtctagctttccacaaagacaacaaaagatg  9150500      ------->MYC3      <-------MYC3     <---------TGA1a     --------->TGA1a   <---------ALFIN1 ------ANAC58                                                             ----------->GT1 ------->AtLEC2                           ----------->GT1                --------->DAG2 ==============bZIP_DOF             <---------YAB1         <---------ARR11(3) ==============bZIP_DOF        >>>>>>>>>MYB98              --------->ARR11(3) ------ANAC58         ----------->GT1--------->YAB1    ---------->DOF2  ---------->DOF2           --- ---TEIL       ----------->GT1<-----------GT1      <---------TOE2(3)<---------TOE2(3)            ---- ==============bZIP_DOF      <-----------GT1 --------->AHL20(2)    ---------->DOF2              -----   catgcacacgtttgcaaatgtaaaatgttatttaacatattataagataaaataagataaagatgtttttaaagtaaagtaatttgattttgaagcacta  9150600                                                                                                  ---                                                                                             <-------                                                                                             --------                                                                                             <-------          --------->MYB52(1)                                                                 <-------         <---------AHL20(2)                                                             <---------ANAC55(2)   ----------->GT1                                                                      --------->ANAC55(2) ------>MYB46(3)                                                  ---------->DOF2      -------------- ---->P  <---------ATHB51   ---------->DOF2                    <----------DOF2         <------------- ---->MYB52(1) ----------->GT1      --------->ANAC46   --------->ZAT14           --------->ANAC55(2)   accgatggaaaataatggagaaaaacagggaaaagaacacaaaacaattggaaatagtatacactctttaaaggcaaaaacttaagtattaagtactttt  9150700  Previous    Next  AGI:  At1g26450.1    Description:  beta-1,3-glucanase-related. similar to beta-1,3-glucanase-related [Arabidopsis thaliana] (TAIR:AT1G69295.1); similar to hypothetical protein OsI_019905 [Oryza sativa (indica cultivar-group)] (GB:EAY98672.1); similar to Os05g0512600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056023.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 9148697    to: 9150237    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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