Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------               <---------ANAC58                                                          <-------TEIL               <---------ANAC58                                                   --------->ALFIN1         <---------ZAT2                                                         --------->CCA1(2)         <---------At4g35610                                                   --------->ARR11(1)      --------->ZAT18                                                          <---------ARR11(3)      --------->ZAT14              <------MYB83  ------>MYB83  <---------ANAC58--------->ARR14(2)      <---------ZAT18              <------MYB46(1)             <---------ANAC46--------->ARR11(3)      <---------ZAT14    <---------ZAT14         ------>MYB46(1)             ----------->ARR10     --------->ALFIN1    --------->ZAT14--------->At4g35610    <---------ANAC58<---------ARR14(2) ---   agaacaagtgcagctagtcgtgtccagagtagagggaaggtgagcaaaaccaaataaaactcatggcgaatgagagaagaagatatgggggttcacaaag  9068000                                                                               <-------GAMYB                                                                              --------->MYB46(2)                                                                              --------->MYB111(2)                                                                              --------->MYB111(1)                                                                              <---------MYB46(3)                                                                              --------->MYB52(2)                                                                           <------MYB83                                                                           <------MYB46(1)                                                                           ------------>MYB.PH3(2)                                                                          --------->MYB111(1)              <---------ZAT14                                          --------->ALFIN1              --------->ZAT14                      <---------ANAC58   ------->MYC3         <---------ZAT14                  ------>MYB46(1)       --------->ANAC46                    -         --------->ZAT14                  ------>MYB83   <----------DOF2  <---------AtMYB61         <    --------->ARR14(2)                  --------->MYB46(3)      --------->ANAC58                   --    <---------ARR14(2)      <-----------RAV1(2)    <---------ANAC58   <-------MYC3                 -- -->DOF2------>ZmHOX2a(1)   <---------LBD16 --------->YAB1      --------->ANAC58                  <-- ------>GLK1(2)           <-----------HVH21<---------ATHB12 --------->YAB1--------->MYB59    <-------   aatccaaatcctgtagtgaagagagacgtttcaggggtctcaccaatcgtgttgtttgcctttaataagccatgtgtaggtagttgcattgttttctttt  9068100                                                       <---------MYB52(1)                                                      <-------GAMYB                                                --------->ARR14(2)                                                <---------ARR14(2) <------NtERF2                               --------->ANAC58                    <---------ANAC58 -------->LBD16      --------->ZAT2          --------->ANAC58                    <---------ANAC58 ---------RAP2.6(3)  --------->At4g35610   <---------AtLEC2                    ------->TEIL ------->ETT(1)      <---------At4g35610  <---------ZAT14                  <---------------AtSPL8 ------->LBD16      --------->GLK1(2)     --------->ZAT14                  --------------->AtSPL8 -------LBD16   <---------HSFB2a(2)    <---------At4g35610             <---------AHL20(2) ---DOF2        --------->HSFB2a(2)    --------->At4g35610            --------->AHL20(2)   gccggaatatgtttttttgtagaagctgtcccaaataagttatctgcacggttctccgttggaaccctgttatataatatgtaccttgttcttcagagac  9068200                                 <---------AtLEC2                              ------>ZmHOX2a(2)                             --------->At4g35610                            <---------ARR11(3)                            <---------ARR14(2)                            --------->ARR14(2)                                                    ---                      --------->ARR14(2)                                                          ---                      --------->ARR11(3)                                                      <------                      <---------ARR14(2)                                                      -------                     --------->GLK1(1)                      <-------TEIL                  ------>MYB83                     <---------GLK1(1)                     --------->CCA1(2)              ------>MYB46(1)                    ---------->TaMYB80                  <---------YAB1                   ----------->RAV1(1)            --------->MYB52(1)========================HOX2a_HOX2a                        --------->MYB52(1)         --------->ANAC46 ------>ZmHOX2a(1)    <------ZmHOX2a(1)                        --------->AtMYB61       --------->ZAT6<---------CCA1(2)      <-----------RAV1(2)         <---------YAB1 --------->MYB46(3)   ttccttctaacacaaaacagagcatatcctgatctgcatgttcaacacaggagccatcaagattcaagagagtgattcttggaagaaaaaccaacagttc  9068300   <---------ICU4                  <----------DOF2   --------->YAB1               ------>MYB83  <---------ATHB12              ------>MYB46(1)                                         <---------HSFB2a(2) ------>LBD16           --------->YAB1                   --------->TOE2(3)    --------->GLK1(2) --->ZmHOX2a(1)  -------->P  --------->MYB46(3)  --------->ANAC58            --------->YAB1   ------- ---ARR14(2)  --------->At4g35610<---------ATHB12--------->ANAC58         --------->YAB1--------->LBD16 -->ARR14(2) ------->GAMYB <-----------GT1     ---------->DOF2    --------->AHL20(2)    --------->HSFB2a(2)   ctgaatcattctcaacagcaaccagataataaccaatctttagcaattgaaaagcaaaacattagttataaaatactaataatctttttccgagaaaaaa  9068400                          <---------MYB46(3)                                                       <-                         <---------WOX13(1)                                                    ------                         <--------P                                                            <-----                      --------->ALFIN1                          <---------ANAC46        --------->At4g35610                   *TSS<---------MYB46(3)              ------------>CBF    --------->ALFIN1--------->MYB52(1)                  ---------->DOF2                <---------TOE1(3)         <-----------RAV1(1)-------               <------ZmHOX2a(1)                 <---------TOE2(3)       <---------ANAC46<---------MYB52(2) --->DOF2     <----------ID1            <------ZmHOX2a(1) <---------ARR14(2)            <---------At4g35610   gaaacgctcatggtagaggacaaagtggttgatgacaaaacaggagtttctaaggttgccaatatggtgtctatgatgtgtggcccaagtagctaacagc  9068500                                                                                     --------->GLK1(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)      <---------ANAC58                                                       --------->WOX13(1)      <---------ANAC58                          <---------GLK1(2)           --------->YAB1  <----------DOF2                             <---------YAB1                <---------ICU4 ----------ARR10                            --------->ANAC55(2)            <---------ATHB12 --->At4g35610                --------------->AGL15 <----------DOF2        --------->ICU4 ----At4g35610    --------->DAG2     <---------ARR11(3)                  --------->WOX13(1) >GAMYB          ---------->DOF2     --------->ARR11(3)       <----------ID1-------->ATHB1   agagctttgcttgctaacaaaaagttgtgctactcttaagagcttcacatgattcttttacaaaacaacaaattgcaatcattcaaaaatctgtcatttt  9068600                                                         ----------->GT1                                                   ---------->DOF2                                                  <------ZmHOX2a(1)                                               <---------LBD16                                   <---                                             <---------ARR14(2)                                 <----                     <---------ALFIN1       <---------GLK1(1)                                --------                    --------->MYB46(3)    <---------ANAC58            --------->RVE1(1)   <---------YAB1                  <-----------GT1         <---------ANAC58    <---------YAB1      ------->TEIL  <----   ctattactacaaactctttgtaaccacttcttaagaaactagttgcatatcaggaaagtgagttattagaaaatatcagaaatgaaactgttctgatttc  9068700     <-------MYC3     ------->MYC3    <---------O2    --------->O2                                      ----------->RAV1(1)            <---------ICU4   <---------TOE1(2)                                <---------------AGL15            --------->YAB1  <---------ALFIN1                                 --------->PCF2                   <---------ATHB51 -------DOF2                                  <---------ICU4                      --------->YAB1 -----ANAC58         <-----------GT1     <-------TEIL <---------ALFIN1         <<<<<<<ZML2       ---- ->GLK1(1)       --------->At4g35610    --------->CCA1(2)             --------->WOX13(1)<---------ICU4 -----ANAC58<---------REM1(2)  ----------->RAV1(1) ----------------->AGL1--------->ZAT6 <-----------GT1   tttcccacgttgtcaacacagttgaaccatttgcaacagtagatacaagtattgccccacagagaaaattatctatcactagaacaataataactgcatt  9068800                                                      --------->TOE2(3)                 ----------->GT1                        --------->MYB52(1)            --------->YAB1                  <---------ANAC58          <------ZmHOX2a(1)                          <<<<<<<<<ARR2         --------->ANAC58       <-----------RAV1(2)--------------->AtSPL3     <<<<<<<<<ARR1  <------ZmHOX2a(1) <---------ANAC58       <---------LBD16<------ZmHOX2a(1)    --------->At5g28300   --------->At4g35610  <---------ANAC46    --------->At4g35610<---------ARR14(2) ----------->GT1     <---------At4g35610<---------ICU4 ----->YAB1         <---------TOE2(3)    --------->ZAT6     --------->YAB1 --------->ANAC58   tatagtagctcaggaaacagtttaggaaacggtaccatttgtaacagtaaatacaatcttattcatcagaggaagttaagcaaacatggcatgttatata  9068900  Previous    Next  AGI:  At1g26208.1    Description:  other RNA Range:  from: 9066623    to: 9068419    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g26210.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68870.1) Range:  from: 9067026    to: 9068194    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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