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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
                                                        --------->LBD16
                                                      --------->HSFB2a(2)              <---------At4g35610
                                                      <---------HSFB2a(2)              --------->At4g35610
                                                 --------->At4g35610                  --------->MYB59
                                                <---------ARR11(3) <---------------AtSPL8
--------->ZAT14 <------ZmHOX2a(1)               --------->ARR11(3) <---------------AtSPL3
<---------ZAT14 ============================HOX2a_HOX2a--------->LBD16               <-----------RAV1(2)
------GT1     <---------TOE2(3)      ------>ZmHOX2a(2)<---------LBD16              <-----------HVH21
 
ctgtatactatcgaattaaggacgaccttgtaaactttgatctgtatttaagagcttcccggagataaaacaagtacggacacaagagtcaggtccaaac  8902800
                          <---------ALFIN1
                      --------->GLK1(1)
                     --------->ARR14(2)                                 <-------TEIL
                     <-----------ARR10                               --------->ZAT2
                     --------->GLK1(2)                               --------->At4g35610
                     <---------ARR14(2)                              <---------At4g35610
                     ------->TEIL                                 <---------At4g35610             --
                --------->MYB52(1)               --------->WOX13(1)  <---------ZAT2       --------->AHL20(2)
               ----------->HVH21    --------->REM1(1)             <---------ZAT2        --------->TOE2(3)
               ----------->TGA1   ------>ZmHOX2a(1)       <---------GLK1(2)     <---------LBD16 <---
 
tcaggctcttctacagacctgacgaatctccactctcctacatcgctaatatcaatccctaaattctccagcagctgcatttactcggaaacattaattc  8902900
                                                                                           ---------
                                                                                        ------>ZmHOX2a(1)
                                                                                    --------->AtMYB61
                                                   --------->ALFIN1                 ------->GAMYB
                                              --------->GLK1(2)                   -------->P
       --------->YAB1                     --------->HSFB2a(2)                     ------->TEIL
<---------ARR14(2)<------ZmHOX2a(1)     --------->MYB52(1)             <-------TEIL--------->MYB46(3)
------->LBD16--------->DAG2            <-----------GT1  --------->ARR14(2)       <-----------GT1
------LBD16 ---------->DOF2        --------->AHL20(2)   <---------ARR14(2)     <---------ATHB12
 
gcggaaacaatgagaaaaagaggacagtgctaaactcataaattaccagaatcagtgtggattcgaagtcgaaattcatcaaatcaacctcctccgagca  8903000
                             <---------ALFIN1              ----------->HVH21
                           <---------MYB59                 --------->WRKY12    ------>ZmHOX2a(2)
                         --------->SPL7                 <-----------RAV1(1)   <------ZmHOX2a(2)
                         ------->TEIL                <---------ARR14(2)  --------->LBD16 ---------->DOF2
                       --------->LBD16          ----------->GT1         <---------HSFB2a(2)
                     <---------LBD16      --------->LBD16--------->At4g35610--------->GLK1(1)
                   <---------ARR14(2)    --------->HSFB2a(2)     <--------P <---------GLK1(1)    ---
>LBD16             --------->ARR14(2)    <---------HSFB2a(2)    --------->At5g28300  <----------ID1
 
tgagtcaagtatagaaatactaaatccggacctcactccgtcttccagagcctgtaaatctgttgacggtaagtcccagagatcggaatcgacaaaggaa  8903100
                        <---------At4g35610
                        <------NtERF2
                        <---------ZAT2
                       <---------ATERF1(1)
                      <---------DEAR3(1)
                      --------->ATERF1(2)
                      <---------ATERF1(2)
                      --------->DEAR3(1)
               <<<<<<<<<CBP60g                   --------->ANAC58
        <---------At4g35610       <---------ANAC58                                               <--
        --------->At4g35610       <---------ANAC58                                             <----
      --------->REM1(1)------>NtERF2  --------->HSFB2a(2)                         --------->ANAC58
     <-------TEIL   <---------RAP2.3(1)          --------->ANAC58               ---------->DOF2-----
  --------->At4g35610<---------LBD16  <---------HSFB2a(2)                     <---------YAB1  <-----
  <---------At4g35610--------->ATERF1(1)      <------ZmHOX2a(1)            <---------YAB1     ------
------>YAB1    <<<<<<<<<SARD1   <-----------GT1 --------->GLK1(1)  <---------ZAT18--------->ANAC58<-
 
tcgtaagcttcatctccaaatttcgccggctgtttttgcttctcgagtaggaactcaacgtcgtctctagggctcttgatgatcaaagcaagtttcagat  8903200
                                                                                          --------->ARR14(2)
                                                                                          <---------ARR14(2)
                  <---------GLK1(1)                                                      ------>MYB46(1)
           <---------GLK1(2)                                                          --------------
           --------->ARR14(2)                                                         --------------
       --------->At4g35610                                                      --------->ANAC58
       <---------At4g35610                                                      --------->ANAC58
   --------->ARR14(2)                                                          --------->ARR14(2)
   <---------ARR14(2)    --------->TGA1a                                       <---------ARR14(2)
---------GT1      --------->GLK1(1)                                            --------->PCF5
-----GLK1(1)  --------->YAB1               --------->At4g35610                ------>NtERF2
---->GLK1(1)--------->ARR14(2)             *TSS                              <---------ZAT18 -------
----GLK1(2)<---------ARR14(2)       --------->ZAT2      <---------ANAC58   --------->At4g35610
--->ARR14(2)--------->GLK1(2)       --------->At4g35610 <---------ANAC58   <---------At4g35610    <-
----------------AGL1     <---------TGA1a  --------->DEAR3(1)            ---------->DOF2  ------>MYB83
 
ttcccatttctgcagaatcggaattcacaagtgtgaagaagctcgccgatgaaagttttccttgtttttcaaagtttaagcggacccaaaccaaatcggt  8903300
           <---------TOE1(3)               <---------ARR14(2)
      <------MYB83 <---------ANAC58        --------->ARR14(2)
     <---------MYB46(3)                  --------->LBD16 <---------YAB1
   <---------MYB52(1)                  <---------LBD16  <---------AHL20(2)
--->AGL1   <---------TOE2(3)  ------>ZmHOX2a(2)        --------->YAB1
--->AG<------MYB46(1) <------MYB83     ----------------->AGL1                      --------->DAG2 ==
---->GT1<---------SPL7<------MYB46(1)<-----------GT1 <---------GLK1(2)            ---------->DOF2 <-
----------GT1      <---------ANAC58--------->YAB1   <---------At4g35610  --------->CCA1(2)    <-----
 
taaaccgttgggttacggtttagcttggtttgatcgaattataccggattcagtcagattataatttgataatcagatagaggcaaaaagtgttcaactt  8903400
                                           <---------At4g35610
                                        --------->TGA2(2)
                                       <-----------TGA1
                                      --------->TGA2(1)
                                      --------->bZIP60(1)
                                      <---------TGA2(1)
                                      =============================MYC_MYB
                                      --------->bZIP60(2)
                                      <---------ANAC46
                                      <---------ANAC55(2)
                                      --------->ANAC55(2)
                                      --------->ANAC58
                                      <---------bZIP60(2)
                                      =================================bZIP_DOF
                                      --------->ANAC58
                                      >>>>>>>>>>HY5
                                      <---------bZIP60(1)
                                      <---------O2
                                      <---------TGA1a
                  <---------MYB46(3)  --------->O2
                <-------GAMYB         --------->TGA1a
                ================================MYC_MYB
               <-----------RAV1(1)   ----------->STF1
             <---------ANAC58        <-----------STF1 <------------AtMYB77
             <XXXXXXXXXXXXXXXXXXXXMIR863-3P--------->At4g35610
             <---------ANAC46      ----------->HVH21 ------>MYB83    --------->GLK1(2)
         <---------ANAC58          ----------->TGA1  ------>MYB46(1) --------->ARR14(2)
         <-------GAMYB  ----------->GT1<-----------HVH21             <---------ARR14(2)
         <---------ANAC58         <-----------HVH21 --------->MYB52(1)
================================================bZIP_DOF        <---------LBD16              ------>ZmHOX2a(1)
---------DOF2<---------ANAC58    --------->ALFIN1 --------->MYB46(3)<---------GLK1(2)     <------ZmHOX2a(2)
-----DOF2=======================================MYC_MYB *TSS<----------DOF2       --------->AHL20(2)
 
tctttcttcttgggttgtgtgttgttgttgttaaatgtgtgacgtcatctcaaaccaactgtgcttcttcggaatctgtaagaaaaaaaatcgatccttt  8903500
                                                                                <---------WRKY38(1)
                                                                                <---------WRKY12
                    --------->ANAC46                                           --------->WRKY18(1)
                    --------->ANAC58                  <-------MYC2          <---------DEAR3(2)
                --------->YAB1                        <-------MYC3          <---------MYB46(3)
               <---------ATHB12                       ------->MYC2         --------->ETT(1)
       --------->DEAR3(1)              <----------DOF2------->MYC3       --------->ARR14(2)
      --------->DEAR3(2)--------->ANAC58           <---------ALFIN1      <---------ARR14(2)
      --------->ATERF1(1)  ---------->DOF2        <---------REM1(2)      <-----------HVH21
     <---------ATERF1(1)--------->ANAC58        <---------ETT(2)       --------->LBD16
    <---------PCF5  --------->ANAC58  --------->TOE2(3)              <---------LBD16        <-------
 
cgactagggaccgcctaaatcatacgcaaacaaagtctcttcctttacccgtctacacgttcgaattttttctccgggtcgggtcaatgtcaagaacgac  8903600
                             <------NtERF2
                             --------->LBD16
                           <---------LBD16
                           --------->ATERF1(1)
                        ----------->HVH21
                        --------->ALFIN1
                       ------->MYC2
                       <-------MYC2
                       ------->MYC3
                       <-------MYC3                 ------>ZmHOX2a(2)
                       <-------PIF5                <---------GLK1(1)              <---------ALFIN1
                       ------->PIF5               --------->ARR14(2)             --------->LBD16
                      --------->O2                <---------ARR11(3)            --------->ANAC46
                      <---------O2                <---------ARR14(2)           --------->ANAC46
                      --------->TGA1a             --------->ARR11(3)       <---------GLK1(1)
                      <---------bZIP60(2)        <---------CCA1(2)         --------->GLK1(1)
                      <---------TGA1a        --------->At4g35610          <---------ARR14(2)
                      --------->ANAC55(2)    <---------At4g35610          <---------GLK1(2)
                <---------DEAR3(2)  <---------YAB1<---------AGP1          --------->ARR14(2)
  ----------->GT1     --------->ANAC46    <---------At5g28300            --------->At4g35610 -------
---ID1  <---------AHL20(2) <---------ANAC46 <-----------RAV1(1)          <---------At4g35610<-------
 
gagaattgtatataatcgtcgattcacgtggccgggtttatcatttactgctggatctcgttttcaattttgagtcagattccccccaattgagagattc  8903700
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AGI:  At1g25375.1   
Description:  metallo-beta-lactamase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO42171.1); contains InterPro domain Beta-lactamase-like; (InterPro:IPR001279)
Range:  from: 8900140    to: 8903244    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g25380.1   
Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT2G47490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42182.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067)
Range:  from: 8903457    to: 8905989    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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