Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----------->RAV1(1) ---------->HVH21                                                --------->ATHB12 ---------ETT(1)                                                --------->ICU4 ---->ZmHOX2a(2)                                             <---------DEAR3(1)        --------->ANAC58 ------>CCA1(2)                                           <---------DEAR3(1)           --------->ANAC58 ----ZmHOX2a(2)                                          <---------ORA47(1)  <---------MYB59 ----->AGP1 <---------ALFIN1                            <-----------HVH21  <---------At5g28300  ----- ------ARR14(2)              <------ZmHOX2a(2)    <---------AHL20(2)------>ZmHOX2a(2) --------->RAP2.6(3) ----->ARR14(2)   --------->ZAT14            --------->LBD16<------NtERF2 <-----------GT1   <------NtERF2 -----At4g35610--------------------->WRI1   --------->HSFB2a(2) <---------YAB1       --------->MYB52(1)   atccgacataagcttcaccctgaactcttcgatcccttcttcgcttcccgatttaaacggtcggcgatgatcggagttaccgaatcgaaacggcatcgaa  8898700                                                         <------NtERF2                                                         ----------->HVH21                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                      --------->ATERF1(1)                                                      <---------LBD16                                                      <------NtERF2                                                     <---------ATERF1(1)                                                     --------->ABI4(1)                                                     ------>NtERF2                                   <------NtERF2    --------->RAP2.3(3)                                  ------>NtERF2     --------->ATERF1(2)                              ------>ZmHOX2a(2)     <---------ATERF1(2)                             <------ZmHOX2a(2)      --------->DEAR3(1)                            <---------ARR14(2)      <---------DEAR3(1)                            --------->ARR14(2)     --------->ATERF1(1)                           --------->GLK1(1)       --------->DEAR4(2)                           <---------GLK1(1)       --------->RAP2.3(1)                          ----------->ARR10       <---------ATERF1(1)                         <------NtERF2           ------>ZmHOX2a(2)                              <----                        --------->LBD16    <------MYB83 --------->LBD16                         <----                       <---------DEAR3(1)  <------MYB46(1)<---------PCF5       <---------MYB46(3)                       <---------ANAC46   <---------MYB46(3)                   <---------REM1(1)-----                  --------->LBD16<---------DEAR3(1)--------->ORA47(2) <---------MYB46(3)        -----                 <---------HSFB2a(2)      <---------DEAR3(1)         <---------MYB52(1)       -------             --------->GLK1(1)<---------DEAR3(1) =======================HOX2a_HOX2a  <---------YAB1             <---------ARR14(2)  --------->DEAR3(1)--------->ERF1   <-------GAMYB   <---------ANAC46     --------->GLK1(2)<---------LBD16     <---------DREB2C(2)    ------>ZmHOX2a(1) <---------At4g35610 ---->MYB52(1)   --------->HSFB2a(2)<---------ANAC46--------->RAP2.3(2)        <-----------RAV1(1)---   acgggagaatcagcgaattccagaggcggagatcggcgtcgtagtcggtgatcgccgccgggacctcctccgttgttgttgttgttgctgatagagtcga  8898800    <---------ZAT14    --------->ZAT14    <---------ZAT18    --------->ZAT18 <---------ANAC58 <---------ANAC58 <---------ANAC46                                                                                  <- -----ARR11(3)                                                                                     -- -----ARR14(2)                                                                                 <----- ---->ARR11(3)                        --------->HSFB2a(2)            <-------GAMYB             <----- ---->ARR14(2)                        <---------HSFB2a(2)           <---------MYB46(3)       <------NtERF2 ---->ARR10                          <---------LBD16                --------->MYB52(2)     <---------DEAR3(1) --->ZmHOX2a(2)             --------->LBD16 ----------->GT1         ------>ZmHOX2a(2)     <------NtERF2   tcttcgtgcacttgagttgtctctgattcccccataagttcgggagagggaaattgtgaagagtcttcgatcgttgctcaggtctcgttgtcgtcgtcgt  8898900                                                                        --------->ANAC58                                                                        --------->ANAC58       --------->LBD16                                               <------ZmHOX2a(1)      --------->LBD16                                           ------->TEIL     <---------LBD16                                         --------->ANAC46    <---------LBD16                                          <---------MYB52(2)                    <- ----------->HVH21       <-------GAMYB                       --------->ANAC58                      <- --------At4g35610      <-----------RAV1(1)                  --------->ANAC58       <----------DOF2<- ------->At4g35610  <---------GLK1(2)                    ===================HOX2a_HOX2a   <----------DOF2 ------HVH21      <---------ATHB12    <----------DOF2    <------ZmHOX2a(2)    --------->WOX13(1)   <- ------TGA1   <---------YAB1<---------ZAT18<<<<<<<<<TBF1--------->ARR14(2)  <---------ATHB12      ---   catctcaccgggaaataccattgattctgttgcacttactctttcttcttctctattcgatccacgaaccaggaacgaatcaatctctttctctttctct  8899000                                                        <---------ANAC46                                                        <---------ANAC58                                                        <---------ANAC58                                                       <-------TEIL                                                       --------->ABI4(2)                                                     <------NtERF2                                                     --------->ATERF1(1)                                                    <---------DEAR4(2)                                                    <---------DEAR3(2)                                                    <---------MYB46(3)                                    <------NtERF2  <---------DEAR3(1)                                  --------->LBD16  --------->ALFIN1                              <-------TEIL       --------->LBD16      <---------HSFB2a(2)    --------->ARR14(1) <---------ATERF1(2) ------>MYB83               <---------ARR14(2) <---------LBD16 <---------AHL20(2) ------>MYB46(1)            <---------GLK1(2)  --------->DEAR3(2) --------MYB111(2)          --------->ARR14(2)--------->MYB52(1)              <---------ANAC58 --------MYB46(2)           --------->ARR11(1)<---------At5g28300             <---------ANAC58 --------MYB111(1) --------->MYB52(2)        <-----------GT1  <---------AHL20(2)         *TSS --------MYB59   <---------MYB52(1)--------->LBD16<---------ABI4(1)         <---------ANAC46      --- ------>ANAC46  --------->TOE2(3)<---------LBD16--------->ATERF1(2)<-----------GT1--------->MYB52(2)   accaaactcgagaaaaatcgttagttttcagattcgccggaaaattgttaccggcggtgcgttttttattttctcgttgtgcgttttttgctgtgatata  8899100                                                               <---------MYB52(1)           <-----------TBP              <-----------RAV1(1)   <------MYB83     <---------ANAC58                  <---------TOE2(3)      ----------->GT1                   <----     <---------ANAC58           <------ZmHOX2a(1)             <------MYB46(1)                   -----     <---------ANAC46         <---------TOE2(3)              --------->MYB59                    <----    <-------TEIL         <---------AHL20(2)                  --------->MYB46(2)        ---------->DOF2 --------->HSFC1(2)      --------->AHL20(2)          ----------->GT1              <---------At4g35610 <---------HSFC1(2)      --------->AHL20(1)    <---------At4g35610                --------->At4g35610 ------->DOF2     <---------HSFB2a(2)<---------AHL20(2)<--------P               <--------P      -----   caaagcttcgtgtatatataccagaaattttttaggaaattaatgttgcatcggagggtaagttcggtaatttcattagatggtagctaaaatgcgcatg  8899200                                                      --------->At5g28300                                                     <------MYB46(1)                             <---------TOE2(3)       <------MYB83                       <-------TEIL                  <---------DEAR3(2)                   --------->LBD16                   ----------->GT1          <----------DOF2                   <---------TOE1(2)                <---------DEAR3(1)       <---------ANAC58 ---MYC3          <---------LBD16                   <---------DREB2C(2)      <---------ANAC58      <- -->MYC3          --------->LBD16            --------->ANAC58             <---------WOX13(1)       <x ---MYC2         <---------LBD16             --------->ANAC58        <---------MYB52(1)         <---- -->MYC2        <---------LBD16       <---------------AGL15        <---------MYB46(3)         <------   tgtttggggtttacattttcccgggttcattaacattttccattttcaagtaagtcggtgaatcaatagccgttggattgctttagtctttcatcttaac  8899300       <-----------GT1      <-----------GT1                                  <---------ANAC46              <----------DOF2     <---------AHL20(2)                       <----------DOF2                        <---------DAG2 --------MYB52(1)                         <-----------GT1                         --------->ZAT6 xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <----------DOF2     <---------ANAC58      --------->YAB1 --------MYB.PH3(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <-----------ARR10 <-----------GT1 -----GT1    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <---------ANAC58 <---------MYB52(1)    <------   cgtttattttaacccatcgcacaatctcactcgaagcctttttgtttccttttttttgtgtgagtttcttctccgtttctaataacacttttactaggtc  8899400                                                                             --------->AHL20(1)                                                                             <---------AHL20(1)                                                                             <-----------ARR10                                                                             <---------ARR11(3)                                                                       --------->TOE2(3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                 <---------HSFB2a(2)   --------->TOE1(3)                                       <---------AHL20(2)          <---------MYB52(1)   ------>ZmHOX2a(1)                                      --------->AHL20(1)          <-------GAMYB   --------->MYB59                        <---------------AGL15    --------->HSFB2a(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                        --------------->AGL15<---------ANAC46   --------->MYB59   <---------TOE1(2)                       <-----------------AGL1<---------ANAC58 ------------>MYB.PH3(1)   <----------DOF2              --------->CCA1(2)       <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------YAB1<----------DOF2     <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) --ZAP1    <---------TOE2(3)          --------->AHL20(2)   <---------YAB1    --------->ARR11(3)   aatttgaaaaattaagataccaatttccttttttcgaaaatttaatggcttctagtaatctataattcggttacctcaatatcttaggtccttttttttt  8899500                                                               --------->YAB1   <----------DOF2               <---------TOE1(2)                             --------->AHL20(2)<---------ANAC58          --------->AHL20(1)                          --------->ANAC46 <---------MYB52(1)          --------->ARR11(3)                   --------->MYB52(2) --------->MYB52(1)          <---------ARR11(3)                   <---------MYB46(3) <-----------GT1         --------->RVE1(1)                  ------------>MYB.PH3(2)<---------At5g28300         --------->CCA1(1)                --------->DAG2    --------->YAB1  <---------WOX13(1)    <--    --------->YAB1                       ---------->DOF2   --------->AHL20(2)  <---------ANAC58 <----   ttttgatcaaaatatcttaggtctaatctatatgcattagagaaaaagtttgttacacaaaataaaaataaccgttggattgctttagtctttcatctta  8899600  Previous    Next  AGI:  At1g25370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G68340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68084.1); contains InterPro domain Protein of unknown function DUF1639 (InterPro:IPR012438) Range:  from: 8897742    to: 8899089    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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