Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ----------->GT1                                                                  ------->TEIL         --------->ANAC46                                       <---------SPL7     <---------ARR14(2)                                         --------->TOE1(2)     --------->ARR14(2)                                        <---------HSFB2a(1)    <------ZmHOX2a(1)                                          --------->HSFB2a(1)  <---------TOE2(3)                                  ---------->DOF2     --------->At4g35610 ----->ATHB12           <---------AHL20(2)        --------->CCA1(2)    <------ZmHOX2a(1) -----ATHB12           --------->AHL20(2)        <---------ARR11(3) <-----------RAV1(2) ->TOE1(2)   <-------TEIL                        --------->ARR11(3) <---------LBD16 >MYB46(3)--------->AtLEC2             ------>ZmHOX2a(2)      --------------->AtSPL3   gattgaggaaccaggcacatatagatttaatcggagtctgatccaaacagagatataaagagagaacgtaccaggaggtgaagagtttgatgaattgagc  8640200                    <---------ARR14(2)                    --------->ARR14(2)                  --------->LBD16                 <---------ANAC46                <------NtERF2               <---------ERF1               <---------RRTF1(1)               ------>NtERF2               <---------RAP2.3(1)              <---------RAP2.6(2)              <---------DEAR3(1)              <---------ATERF1(2)              <---------RRTF1(2)              <---------RRTF1(3)              <---------ANAC46              --------->ATERF1(2)              <---------RAP2.3(2)              <---------O2              <---------bZIP60(1)              <---------RAP2.3(3)             --------->ATERF1(1)                        --------->ATHB12            --------->MYB52(1)                         --------->ICU4                     <---------ARR14(2)           ----------->TGA1         ----------->GT1    <---------YAB1                     --------->ARR14(2)           --------->ALFIN1         <---------ANAC58 <---------ICU4             --------->ALFIN1           ----------->HVH21 <------ZmHOX2a(1)       --------->YAB1            --------->LBD16          <-----------HVH21 ----------->GT1  ----------->GT1                  <---------ANAC58    ---------->DOF2<------NtERF2    <---------ANAC46<---------ATHB51          <---------ANAC58------>ZmHOX2a(1)  <---------ZAT6<---------LBD16     <---------ANAC58--------->ICU4      <---------ANAC55(2)   =======   gatagtgaaagaggtgacggcggaaatgagaggataattcgtgaaaatggagaaataatgagtggaagacgaagacgtagccgtggctgtagaatcctcc  8640300             ------>ZmHOX2a(2)           ------->TEIL           <---------ARR14(2)           <---------AGP1           --------->ARR14(2)                                              --------->YAB1           --------->ARR11(3)                                             <---------ATHB12        <---------WOX13(1)                                          --------->ANAC58     <---------ATHB12                             >>>>>>>>>TBF1     --------->ANAC58   <---------At4g35610 <----------DOF2         >>>>>>>>>TBF1  --------->ANAC58 ===================HOX2a_HOX2a         ---------->DOF2       --------->ANAC58------>ZmHOX2a(2)   atggccgatgatggatctagtcaggctttaaatcgtgctagcgaaagaagaagaagaaaatgacaccgaaacgacaatgatccataaaacgtcgactaat  8640400                                                                            *TSS                                                                         <---------AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                                                 >>>>>>>>>>WRKY62                                                                 >>>>>>>>>>WRKY40                          --------->ETT(2)                       >>>>>>>>>>WRKY18                   --------->ATERF1(1)                           <---------WRKY18(1)                   <------NtERF2                       <------------------------ANAC81                 <---------ANAC46                   <----------DOF2     <---------AHL20(1)                 <---------ANAC58               <----------DOF2 --------->WRKY45         <<<<<<<<<<<<<<<<<LFY                 ---------->ID1    --------->WRKY38(1)           -------         >>>>>>>>>>>>>>>>>LFY             <----------DOF2       --------->WRKY12        --------->At4g35610 <----------DOF2 <---------ANAC58       ------>ZmHOX2a(1)     <----------DOF2           --------->ZAT14   tccctttcaaactccaatggcgtctacgtctaccgttcaatcctctttgtctttctttttttttctttgaccaattttttttttaaacactgctccacaa  8640500                    --------->LBD16                   --------->ANAC46                   --------->ANAC58                   --------->ANAC58           --------->ANAC46                  <---------LBD16          --------->ARR14(2)   --------->AHL20(2)                      <---------ARR14(2)          *TSS   --------->AHL20(1)                 ------->TEIL                   <-----------HVH21   <---------ARR11(3) --------->ARR14(2)  <---------CCA1(2)      --------->TOE1(2)   <---------AHL20(1) <---------ARR14(2)  <---------ARR14(1)     --------->TOE2(2)                --- -->ANAC46------------>CBF           <-----------GT1         --------->ARR14(2)        <<<<<<<<<<GATA-1   aactatatattatacaattacccgcatccgaacaaatatgaaccgtatccgatacaaaacccgaatacctaggtcagttctattcgtgaaatcgagtctc  8640600                                                                                           --------->ATHB51                                                      --------------------->WRI1          <---------YAB1                                             ----------->HVH21                         --------->AHL20(2)                         --------->YAB1    --------->O2                                <---------AHL20(2)              ------>MYB83  <---------ICU4 <---------O2                             --------->AHL20(2)              ------>MYB46(1)              <---------TGA1a                          --------->AHL20(1)           ----------->RAV1(2)    <----------DOF2<---------MYB59    <----------DOF2 <---------AHL20(1)         ------>NtERF2--------->YAB1       --------->TGA1a<---------MYB52(1)  --------->GLK1(2)        --------->DEAR3(1)  --------->YAB1 ====================================bZIP_DOF<---------YAB1 --->ZmHOX2a(1)   <---------ALFIN1===================bZIP_DOF       <---------DAG2  <---------ARR11(3)   ctcttattcgacgacctgccccaactataaacatgacttttacacacttgacataacttcgtttgtatcgcttttttgaaattctatatattattattgt  8640700                                                                                                  ---                                                                                                  <--                                                                                             --------                                                           <----------DOF2             <---------DAG2                                                          <---------ICU4<------------------SPL14  <--                                                          ------>ZmHOX2a(2)            <----------DOF2                                                        <---------ARR11(3)       --------->ARR14(2) <                                       <<<<<<<<<TBF1    --------->ARR11(3)   <---------LBD16--------- <---------At4g35610          <-----------GT1 <---------ALFIN1       <-------TEIL<---------ARR14(2)-- --------->At4g35610      <----------DOF2    <---------ZAT14   <---------TOE1(1) <---------GLK1(2)---   ttgagcagaaactaagacaaaattaagacttttctctcttcttcttctccactgggtcgatctttacgaggttcacttgtacggattcactttaacaaca  8640800                       <---------ZAT2                       --------->At4g35610                       <---------ABI4(2)                       <---------At4g35610                       --------->ZAT2                  <------NtERF2                  --------->ATERF1(1)                --------->O2               --------->DEAR4(2)               --------->ATERF1(1)               <------NtERF2               --------->RRTF1(1)               --------->ERF1              ------>NtERF2              <---------ATERF1(1)              --------->ABI4(1)             --------->RAP2.6(2)             --------->RRTF1(2)             --------->DREB2C(2)             --------->ATERF1(2)             --------->RAP2.3(2)             --------->RAP2.3(3)             --------->RRTF1(3)             --------->DEAR3(1)             <---------DEAR3(1)            --------->DEAR4(2)            --------->RAP2.6(1)            --------->RAP2.3(1)            --------->ERF1            --------->RRTF1(1)            <------NtERF2           ------>NtERF2           <------NtERF2<---------ALFIN1           <---------RAP2.3(1)           --------->ATERF1(1)           <---------At4g35610           --------->At4g35610           <---------DEAR4(2)           --------->DREB2C(1)           <---------DREB2C(1)           <---------ATERF1(1)          --------->RAP2.6(2)                                               ------>ZmHOX2a(2)          <---------ATERF1(2)                                         <---------MYB52(1)          --------->DEAR3(1)                                         --------->LBD16          <---------DEAR3(1)                                        <---------ANAC58          --------->ANAC46 --------->DEAR3(1)                       <---------ANAC58         <---------RAP2.6(2)                                        <---------ANAC46 --------->ANAC58------>NtERF2                                <------MYB83 --------->GLK1(1) --------->ANAC58<---------ATERF1(1)                      --------->ZAT2   <---------GLK1(1) ------>ARR14(2)<---------O2                         <---------HSFB2a(2)   <------ZmHOX2a(2) -------GLK1(2)--------->RAP2.3(1)                   --------->HSFB2a(2)  --------->ARR11(3) --->RAV1(1)--------->ORA47(2)                     <------NtERF2<---------GLK1(1)  --------->ARR14(2) -------ARR14(2)--------->RAP2.3(2)               <-----------HVH21 --------->ANAC55(2)             - -------TEIL--------->ATERF1(1)                   <---------RAP2.6(3)<-----------HVH21<---------ETT(1) >MYB46(3)--------->ATERF1(2)                    --------->DEAR3(1) <---------ANAC55(1)            <- ------->ARR14(1)<-----------HVH21          ---------->DOF2   <------MYB46(1)      <---------ARR14(2) ------>ARR11(1)--------->DEAR3(1)  <---------At4g35610   <---------ZAT2  <---------ARR11(3)      <--   gattcgccatggccgccgccgtcgcagcaccgagactcatctccttgaaagccgtcgcgaagctaggtttccgtgagatctctcaaatccgacaattggc  8640900                                                   <------NtERF2                                                   <---------At4g35610                                                   --------->At4g35610                                                 <-----------RAV1(2)                                                 --------->ATERF1(1)                                                --------->ATERF1(1)                                                <------NtERF2                                                <---------ATERF1(1)                                                --------->At4g35610                                              <---------RAP2.6(2)                                             <---------LBD16                                            ------>ZmHOX2a(2)                    ------>ZmHOX2a(1)   --------->ZAT14                        --------->ARR11(3)               <---------ICU4 -------->At4g35610                       <---------ARR14(2)          <---------KAN4(2)           <-- --------ALFIN1                --------->TOE1(2)<---------At4g35610----------->GT1               <--- ----NtERF2      --------->TOE2(3)   <---------REM1(1) <---------MYB52(1) <-------TEIL        <------   tccgcttcactctgcgatacctcatttcggaatgctgcgatgtagatcgcggcagccgttttctacctctggtatattcattcctcttctctcttccttt  8641000                                                                                            --------- <---------ARR14(2)                                                --------->ANAC46       <---------- --------->ARR14(2)                                                --------->ANAC58    --------->YAB1 -------RAP2.6(2)  ------>ZmHOX2a(2)                          --------->At4g35610     <---------ATHB12 ------LBD16     --------->ARR11(3)              <-----------GT1   --------->ANAC58   --------->MYB46(3) ----DOF2 ----------->ARR10                ---------->ID1  ---------->DOF2          --------->WOX13(1)   gcggttttggcatagatttgatctctctcaattctcaacatttttgtggtattacagttgtgaaagctcaagctactgctactgagcaatcaccagggga  8641100  Previous    Next  AGI:  At1g24350.1    Description:  catalytic. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G67600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46666.1); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326) Range:  from: 8638509    to: 8640476    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g24360.1    Description:  3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase. Identical to 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplast precursor [Arabidopsis Thaliana] (GB:P33207;GB:O04463;GB:Q9FPJ6); similar to tropinone reductase, putative / tropine dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G29370.1); similar to 3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplast precursor (3-ketoacyl-acyl carrier protein reductase 1) (Beta-keto acyl-carrier protein reductase 1) (GB:Q93X62); contains InterPro domain 3-oxoacyl-(acyl-carrier-protein) reductase; (InterPro:IPR011284); contains InterPro dom Range:  from: 8640571    to: 8643467    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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