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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
                               -------->HAHB4                                     ------->GAMYB
                              <---------YAB1                                    ------>MYB83
                              --------->ICU4                                    ------>MYB46(1)
                            --------->YAB1                           <---------ANAC58
                           <---------YAB1                            <---------ANAC58
                          --------->AHL20(1)                       <---------ANAC46
                          <---------AHL20(2)                     <-----------RAV1(1)       ---------
                          --------->AHL20(2)                <---------MYB46(3) --------->MYB52(1)
  <-----------GT1        --------->YAB1         <----------ID1   <---------ANAC46--------->MYB46(3)
------>TEIL        --------->YAB1 ------>ZmHOX2a(2)  ---------->DOF2<---------MYB46(3)---------->DOF2
 
tgaatttacaactcatatacaaacacaattataatgatccgattaatagatgagacaaaagagtggttttgtgggtgtttaccaacggacaaaggaaagg  8440500
                                                   ------>ZmHOX2a(1)
                                                   --------->LBD16
                                                 ------>ZmHOX2a(2)
                                                --------->GLK1(2)
                              ==========================HOX2a_HOX2a
                              <------ZmHOX2a(1) <------ZmHOX2a(2)
                              =========================HOX2a_HOX2a
                        --------->GLK1(2)      --------->ARR11(3)
                   <------NtERF2               <---------ARR11(3)
                  --------->LBD16              --------->ARR14(3)
                 <---------ATERF1(2)           --------->ARR14(2)
                 --------->HSFB2a(2)           <---------ARR14(3)
                 <---------HSFB2a(2)           <---------ARR14(2) <---------ANAC46
  ----------->GT1--------->ATERF1(2)         ----------->ARR10  ------->TEIL
  <---------ZAT6<---------LBD16    =======================HOX2a_HOX2a                             <-
->DOF2         --------->MYB52(1)  <------ZmHOX2a(2)   ---------->DOF2                            --
 
aagtagtgtaaaatgtactgccggaagaatcaaggacgatcagattagaagatcctggtaaagcatgaatcgtgtatggattcagaccagacttatggcc  8440600
                 <---------SPL7
       <---------MYB52(1)                                                                         --
      <-------GAMYB                           <---------ATHB12           --------->AHL20(2)   ------
  <---------ALFIN1           <---------HSFB2a(2)                   <------ZmHOX2a(1)          <-----
  --------->AtMYB61          --------->HSFB2a(2)   --------->At5g28300   <---------AHL20(2)   <-----
 --------->MYB46(3)--------->SPL7          --------->ZAT6         ----------->GT1           <-------
--------ETT(2) --------------->AtSPL8   <-----------GT1      --------->YAB1                 <<<<<<<<
------->MYB46(3)--------->TOE1(1)   <---------ARR11(3)       <---------ICU4                <-------GAMYB
 
atcgaccaccgttgtgacttcgtacccttcttctaaaactatcttaccactcactgtaacaaaatcatgaggaaaattaaaaattcgaattttgggttgg  8440700
                                                                           <---------ARR14(2)
                                                                           --------->ARR14(2)
                                                                          --------->HSFB2a(1)
                                                                          --------->GLK1(1)
                 <---------ARR11(3)                                       <---------GLK1(1)
    --------->At4g35610                                               --------->ANAC58
------->GLK1(1)  --------->ARR11(3)                                   --------->ANAC58 --------->bZIP60(2)
----->GT1        <---------GLK1(2)                                   <---------------------WRI1
-MYB46(1)   --------->MYB52(1)                                    --------->ANAC58--------->ANAC58
-MYB83      <-----------GT1                                       --------->ANAC58--------->ANAC46
-P  <---------At4g35610                      <----------ID1      <---------LBD16  --------->ANAC58
<MYB98------->GAMYB                   <---------WOX13(1)      --------->CCA1(2) <---------ALFIN1
 
gaaattcaactgaattaacagatttttgaaaatatacccagattgaaaacgacgaacaagaagagagacacggacgaaaatccccaagccatgtcaaaat  8440800
                                       --------->ANAC55(2)        <---------TOE1(3)
                  <---------ANAC46     <---------ANAC55(2)      ---------->DOF2
              --------->ZAT14     <---------ZAT6      *TSS   <----------DOF2    --------->CCA1(2)
              <---------ZAT14   <---------ANAC46   <---------At4g35610         <---------ARR11(3)
      --------->DAG2         <-----------RAV1(1)<---------At4g35610        ---------->DOF2
     ---------->DOF2     <---------ANAC58      <-----------RAV1(1)<---------TOE2(3)
  <------ZmHOX2a(1)      <---------ANAC58  <---------YAB1    --------->TOE2(3) --------->ARR11(3)
 
cgagaggagaaagcgactgttctgtgtaacttgtgttgtgttacttatttttgctgcttagcatctttaaaggttttaaaaagatactagggcctgagcg  8440900
                                             ---------->DOF2
                  <---------ANAC46     ------------>CBF <---------ARR11(1)
                 --------->ALFIN1      --------->MYB46(3)
                <---------ZAT14       --------->ANAC58  --------->ARR14(2)
               <---------REM1(1)      --------->ANAC58  <---------ARR14(2)
               --------->ALFIN1      ------->GAMYB   <---------ANAC55(2)                --------->RAP2.6(3)
     <---------ANAC46     --------->GLK1(2)<---------ATHB12  --------->MYB46(3)        --------->MYB52(1)
  <---------YAB1--------->ZAT14     --------->MYB46(3) <---------CCA1(2)            --------->YAB1--
 
atactatgatgtgttcaagtgtaggggagaatttgtgtaacaaccaatgaaagagcgcgtatcatcgaccctctcaaatttgactaataaaaacggccca  8441000
                                                                                       <---------ANAC46
                                                                                      <---------TOE2(3)
                                                                               <---------DOF5.7(2)
  <---------ZAT18            --------->MYB52(1)                  <---------ANAC58     <---------AtMYB61
  --------->PCF2            --------->ARR11(1)                   <---------ANAC58  <---------MYB52(1)
 <---------PCF2         ---------->DOF2                      <------------CBF  <---------At5g28300
------->ALFIN1    <-----------GT1                           <------ZmHOX2a(1)--------->DOF5.7(2)
 
agtagggcccatttatgtgtttaactataaagaaacggcccagtctatgtttttgttttgagaggattgctggtcgaaacgttaccgtttaggtggaaat  8441100
                                   <---------YAB1
                                   <---------TOE1(3)
                                   <---------TOE2(3)                                       ------>ZmHOX2a(1)
                                 <---------ICU4                                           --------->TOE2(3)
                                 --------->YAB1                                        <---------ARR14(2)
                                <---------ATHB51                                       --------->ARR14(2)
                              --------->WOX13(1)                                  --------->CCA1(2)
                     --------->AHL20(2)                                           ================HOX2a_HOX2a
               --------->ANAC58 --------->ICU4                                    <------ZmHOX2a(2)
               --------->ANAC58 <---------ATHB12                                 <---------ARR14(2)
          <-----------GT1   ------------>CBF                                     <---------ARR11(3)
    --------->ICU4   <---------AHL20(2)                    *TSS                  --------->ARR14(2)
    <---------YAB1  --------->AHL20(2)                ----------->GT1            --------->AGP1  <--
 
ggaagtcatgtttatacaacgcatttaatttggcaattatggtttacgaagactgagaagaaaaaaacgagcatcgtccatcgagatccaaatcctcagt  8441200
                                                                    <---------ORA47(2)
                                                                    <---------RAP2.3(1)
                                                                    <---------ERF1
                                                                    ------>NtERF2
                                                                    <---------DEAR4(2)
                                                                   <---------DEAR3(1)
                                                                   --------->DEAR3(1)
                                                                   <---------ATERF1(2)
                                                   <---------ARR14(2)
                                              <---------DOF5.7(2)  <---------RAP2.3(2)
                                              --------->MYB52(1)   <---------RAP2.3(3)
                                             ----------->HVH21     --------->ATERF1(2)
                                            --------->DOF5.7(2)   <---------ABI4(1)
                                            <---------MYB52(1)    --------->ATERF1(1)
                                           --------->LBD16        <------NtERF2
                                         <---------LBD16         ------>NtERF2
                                      <---------HSFB2a(1)        --------->LBD16
                                      --------->HSFB2a(1)        <---------ATERF1(1)
                                      --------->HSFC1(2)        <---------LBD16
                                  --------->ANAC46 --------->ARR14(2)--------->RAP2.3(1)
                                 <---------HSFB2a(2)           <---------LBD16        --------->LBD16
                                 --------->HSFB2a(2)--------->GLK1(1)<------NtERF2    ------>NtERF2
      <---------CCA1(2)     <---------At4g35610    <---------GLK1(2)<---------ATERF1(1)
      <---------At4g35610   --------->At4g35610 <------------MYB.PH3(1)              --------->LBD16
-----TEIL             --------->ICU4  <---------HSFC1(2)<-----------GT1             <---------LBD16
 
ttcattttcatctctctctctcgtattgatcagctactcgaaactccggtaacggattttcacaatcccggcggcgaaactcttcttcccggctaagttt  8441300
                              <---------ETT(2)
                              --------->WRKY38(1)
                             --------->ALFIN1
                            <---------MYB52(1)
                          --------->ATERF1(2)
                          <---------DEAR3(1)
                          <---------ATERF1(2)
                         <---------LBD16
                         <---------ANAC58                          ------->TEIL
                         <---------ANAC58                       <---------YAB1
                         <---------ANAC46                     --------->YAB1
                   --------->DAG2                             <---------ICU4
                  ---------->DOF2                            <---------ATHB12                 ------
               --------->TOE1(1)                      --------->ANAC46          --------->HSFB2a(2)
              ------>ZmHOX2a(1)                       --------->ANAC58          <---------HSFB2a(2)
         <---------GLK1(2)<---------DREB2C(2)         --------->ANAC58  <---------DAG2       <------
        <---------At4g35610--------->LBD16          <---------ALFIN1    <----------DOF2      <------
 
tcattttcttcagattcctcgtaaagttgccggtggaccaaggtccaactcttgaacaccccaaatcatgaatcccttttcttctggtactcgtttaagg  8441400
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AGI:  At1g23890.1   
Description:  NHL repeat-containing protein. similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G14860.2); similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G14860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69795.1); contains InterPro domain NHL repeat, subgroup (InterPro:IPR013017); contains InterPro domain NHL repeat (InterPro:IPR001258); contains InterPro domain Six-bladed beta-propeller, TolB-like (InterPro:IPR011042)
Range:  from: 8438755    to: 8440855    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g23900.1   
Description:  GAMMA-ADAPTIN 1; clathrin binding. similar to clathrin binding [Arabidopsis thaliana] (TAIR:AT1G60070.1); similar to hypothetical protein OsJ_019439 [Oryza sativa (japonica cultivar-group)] (GB:EAZ35956.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40914.1); similar to hypothetical protein OsI_021063 [Oryza sativa (indica cultivar-group)] (GB:EAY99830.1); contains InterPro domain Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; (InterPro:IPR008152); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like s
Range:  from: 8441160    to: 8447508    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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