AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
   <---------YAB1-------->P
  --------->AHL20(1)
  --------->AHL20(2)  <----------DOF2                                                       <-------
<---------AHL20(2)    <---------DAG2                                                        --------
--------->AHL20(2) <---------ALFIN1                               <------MYB46(1)          <--------
--------->AHL20(1) --------------->AGL15         <----------DOF2  <------MYB83        --------->REM1(2)
<---------AHL20(1)--------->MYB46(3)         ---------->ID1      --------->MYB59     --------->ALFIN1
------>AHL20(2) <-----------GT1      --------->ANAC58        <---------ICU4        <---------ANAC46
-------AHL20(2) --------->WOX13(1)   --------->ANAC58       --------->ICU4     <---------ANAC46
->ICU4      --------->WOX13(1)    ----------->HVH21     <------ZmHOX2a(1)    <---------MYB46(3)<----
 
taaaatattatacatctatcaaccactttaagcatctatgacgcatttgtttctttagaggacataattaggtcatttagtggctgatgtgtagaatatt  8168000
                                                           <---------ANAC58
                                                           --------->ANAC46
                                                 <---------WOX13(1)
                                               -------->HAHB4
                                               <---------ICU4
                                               --------->ATHB12
                                              <---------YAB1
                                      <---------AHL20(2)   --------->ANAC55(2)
                                 --------->AHL20(2)        <---------ANAC58
    --------->ARR11(3)   <---------ANAC58     ----------------------->TaNAC69(2)
    --------->GLK1(2)    <---------ANAC58     --------->ICU4           <---------AHL20(2)
--KAN4(1)      <-----------GT1   <---------AHL20(1)        <---------ANAC55(2)
->KAN4(1) <---------ANAC46       <---------AHL20(2)      <-----------GT1      ---------->DOF2
-KAN4(2) ---------->ID1  <---------ANAC46  <---------AHL20(2)         --------->AHL20(2)
---TEIL<-----------RAV1(1)<----------DOF2 --------->AHL20(2)       <----------DOF2    <---------AtLEC2
 
catctaaaatctgtcgtttaacaaaatggcttttattttattttataaaatgattgcagtttacgtctctctttttaatagcaaagcctgcatgttcttc  8168100
                                                        ---------->DOF2
                                                       --------->ANAC46
                                                    <---------REM1(2)                       --------
                                                    <---------ZAT14                        <--------
                                                    --------->ZAT14                        <--------
                                                    --------->ZAT18                      ---------->DOF2
               --------->AHL20(2)                 --------->REM1(2)                 <---------YAB1
               --------->YAB1                     <---------ZAT14                 <---------AHL20(2)
              <---------ATHB12                    <---------ZAT18           --------->AHL20(2)
    --------->YAB1                                --------->ZAT14  --------->DAG2--------->AHL20(1)
    --------->ATHB51                           <---------ANAC46   ---------->DOF2<---------AHL20(1)
    <---------ICU4                           <---------ZAT14   --------->DEAR3(1)--------->AHL20(2)
    --------->ATHB12                       <---------ZAT14     --------->RAP2.3(3)--------->AHL20(2)
   <---------ATHB51           <-----------GT1--------->ZAT14  <------NtERF2 <---------AHL20(2)    <-
   --------->ICU4        --------->AHL20(2)--------->ZAT14    --------->RAP2.3(1)<---------AHL20(2)
 
gatacaattatgggtcaataatatacgattatttaaccaaaacgtctgtacagtgtacacagagcgccgaaaagcccatttaaatttatttttaaaggtt  8168200
               --------->ANAC58
           <------ZmHOX2a(2)
           --------->CCA1(2)
          --------->ARR14(2)
          <---------ARR14(2)                                                 <---------YAB1
   ------>MYB46(1)                                                       --------->KAN4(2)
   ------>MYB83--------->ANAC46                                         --------->KAN4(1)
 --------->AtMYB61               ----------->GT1                        --------->HSFB2a(1)
 <---------MYB59 --------->AHL20(2)         --------->TOE2(3)           <---------KAN4(1)
--->GT1   --------->AGP1<---------ZAT6  <---------AHL20(2)              --------->HSFC1(2)       ---
-TOE2(3)  --------->ARR11(3)  <---------ARR11(3)                        <---------HSFC1(2)   -------
-TOE1(3)  <---------ARR11(3)  --------->ARR11(3)                        <---------HSFB2a(1) <-------
----------GT1  --------->ANAC58<------ZmHOX2a(2)           <-----------GT1--------->GLK1(2) --------
 
ataaccaaaccaagatccaagaaaatagtgtaagatcagtaatttaaacttaatcaggcattttacatagttagaacattctgagtaaataagtctacac  8168300
                                                                                                   <
                                                                                                 <--
                                                                                                 <--
                                                                                                 <--
                                                                                                 ---
                                                                                                 ---
                                                                                                <---
     --------->TOE2(3)                                                                          ----
    ----------->GT1                                                                             <---
<---------AHL20(2)                                                                              ----
-------->GT1       --------->MYB52(1)    --------->AHL20(2)                                 --------
-->ZAT6           ------->GAMYB       --------->YAB1                                      --------->ZAT6
--ZAT14          <---------MYB52(2)  --------->AHL20(2)                                 <-----------GT1
->ZAT14     --------->ANAC46--------->AHL20(2) <---------YAB1                      --------->AHL20(2)
 
tagttaaatgttaatccacaactaacaaaaaataaatccattaataaactatgactaagacggactaaaatcgaataaactagcgataaattaacaccaa  8168400
 ---------->DOF2
<---------AHL20(2)
--------->AHL20(2)
---------YAB1
-------ICU4                                                 --------->O2               ------>MYB83
------HAHB4                                            --------->ANAC58                ------>MYB46(1)
------ATHB1                                            --------->ANAC58           --------->ANAC46
------>ATHB51                                      <-----------GT1                <---------ALFIN1
------>YAB1                                    <--------ATHB1                  --------->ZAT14
------ATHB51                                  <---------ATHB12                 <---------ZAT14
----->ICU4 <---------TOE2(3)--------->At4g35610--------->ATHB51                --------->ZAT18
------ATHB12 <------ZmHOX2a(1) *TSS           <---------ATHB51         --------->STY1(2)
----->AHL20(2)          --------->STY1(2)     --------->ICU4<---------O2       <---------ZAT18    <-
---->CBF   <---------TOE1(3)<---------At4g35610<---------ICU4          <---------STY1(2)    <-------
 
taattaaagtgattaaggaagaatactagttagcaaaccattcgttccaataattcacaagacaagtgtcttctagctagagtccacaccttccaactaa  8168500
                                                            --------->AHL20(2)
                                                           --------->AHL20(2)
                                                        --------------->AGL15
                                                        <---------------AGL15
                            <----------DOF2          <-----------GT1
                         <-----------GT1       <----------DOF2
                         <---------AHL20(2) --------->ARR11(3)                              --------
---------DOF2     --------->TOE2(3)         <---------ARR11(3)    ---------->DOF2       --------->ARR11(3)
--MYB52(2)        --------->YAB1        ---------->DOF2<---------YAB1                   <---------ARR11(3)
 
gcttttgccaaaaaaaacttatcttaatttactttctcttatccaaagttctttgtttaccattaaaaaaaaagaaccattctttcaccaagttcttgta  8168600
                                                                                                   <
                                                                                                  --
                                                                                                  <-
                                                                                                  --
                              <---------ICU4                   <----------DOF2                 <----
                              --------->YAB1      --------->TOE1(3)                            -----
      ---------->DOF2        <------ZmHOX2a(2)    --------->TOE2(3)               <---------------AGL15
--->GT1                     --------->ARR11(3) <---------WRKY18(1)         <-----------GT1    <-----
 
aaacaaaacaaaagaaaacatgaacacaaacgatcatggccttctcttcttgaccttaatcttcgtcttttctcttgtttacttcccctacttagtcata  8168700
                                           <---------AtMYB61
                                           --------->ALFIN1
                                        <---------AtMYB61
                                   <------NtERF2                                           ------>ZmHOX2a(1)
                                 --------->RAP2.6(2)                                <---------ARR11(3)
                                 --------->DEAR3(1)                                 <---------ARR14(2)
                                 --------->RAP2.3(2)                                --------->ARR14(2)
   --------->ANAC58             --------->ERF1           <---------ALFIN1          <---------CCA1(2)
   --------->ANAC46             --------->DEAR4(2)       --------->ANAC46        --------->AtMYB61
   --------->ANAC58             --------->RAP2.3(1)    --------->AtMYB61       ----------->RAV1(1)
 <---------ALFIN1              <---------ATERF1(1)     <---------ALFIN1        =====================
-----------HVH21   --------->LBD16------>NtERF2 <------NtERF2 ------>MYB46(1) <---------ALFIN1
------->ANAC46 --------->MYB52(1)--------->RAP2.3(3) ------>ZmHOX2a(1)        --------->AtMYB61
--------ETT(1) ------>MYB46(1) ------->GAMYB   <---------MYB46(3)            --------->MYB46(3)
--------->HVH21------>MYB83   --------->ANAC46 <---------ATERF1(1)         ------->GAMYB------>ZmHOX2a(1)
-----ARR14(2)  -------->P --------->MYB46(3)<---------MYB46(3)------>MYB83 --------->AtMYB61
---->ARR14(2) <---------ALFIN1--------->DEAR3(1)--------->ATERF1(1)       <---------MYB55(2)       -
----CCA1(2)  <---------MYB111(1)--------->ORA47(2)<---------ATERF1(1)     --------->MYB46(3) <------
 
tccgacacaccatgtccctacccgtgttatccaacgccgcctattggtggtggctcctccacaccttccatgactcaaccaccaccatatcctcctccag  8168800
                                                               <---------MYB111(1)
                                                               <---------MYB52(2)
                                                               <---------MYB111(2)
                                                               <---------MYB46(2)
                                                               --------->MYB46(3)        <------NtERF2
                                                             --------->MYB52(1)         --------->LBD16
                                                             ------>MYB83              <---------ANAC58
                                                           <---------MYB59             <---------ANAC46
                                                        <-----------GT1                <---------ANAC58
                                                       --------->KAN4(2)              <---------LBD16
                <---------At4g35610                   <---------KAN4(1)               <------NtERF2
                <---------ZAT2                        --------->KAN4(1)               --------->ATERF1(1)
                ----------->RAV1(2)                  <---------KAN4(2)              <---------DEAR3(1)
     -------->P --------->At4g35610              <------MYB83------>MYB46(1)        --------->ALFIN1
   <---------MYB52(2)              <-----------GT1   ---------->TaMYB80          <---------AtMYB61
   --------->MYB46(3)              <---------At5g28300<----------TaMYB80  <---------ALFIN1
   <---------MYB46(2)          ------>MYB46(1) <--------P --------->ANAC55(2)    <-----------RAV1(1)
   <---------MYB111(1)       <---------MYB59  <-------GAMYB<---------MYB46(2)   --------->SPL7
 <---------DOF5.7(2)      <-----------GT1     <---------MYB52(1) -------->P<------------------SPL14
=====RAV        --------->ZAT2 ------>MYB83<---------LBD16--------->ANAC46------------------>SPL14
-------->DOF5.7(2)     ---------->TaMYB80 ------>ZmHOX2a(1)<---------MYB111(1)<---------SPL7   <----
-----RAV1(2)  <-----------RAV1(2) <-----------GT1<------MYB46(1)<-----------GT1<---------MYB52(1)  <
 
gcgttaactaccctactccagctgggaatttaccaaattaccctcctccggttgggaatatacctaactacccttctccaccgtatggtggcggagacag  8168900
<- Previous    Next ->

AGI:  At1g23050.1   
Description:  hydroxyproline-rich glycoprotein family protein
Range:  from: 8168432    to: 8169256    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version