Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <----------DOF2                                                        --------->ZAT2                                                        <---------At4g35610                                                        --------->At4g35610                                                        <---------ZAT2                       <-------  <---------AHL20(2)                                   --------->GLK1(2)        ----------->GT1  --------->AHL20(2)          ----------->GT1        <---------At4g35610       --------->CCA1(2) --------->AHL20(2)      ---------->DOF2     <-----------GT1<------NtERF2   <---------YAB1<---------TOE2(3)   caatttaaatttggattttgagagagataaagatgtgaaacagcaatttaccttcagaagctggcatttttgtggatgaagatagagaaatagaggtttt  7624000                                                                                                 ----                                                                                                 <---                          ----------->GT1                                       --------->ZAT2   ----                  --------->ANAC58                                              <---------ZAT2   <---                  --------->ANAC58               ---------->ID1                 --------->At4g35610--              --------->ANAC58           <----------DOF2                  --------->GLK1(1)     -----    <---------LBD16     <---------MYB52(1)   <----------DOF2              <---------GLK1(1)     -----   <---------ANAC46 <---------ARR11(3)  <---------ANAC58               <---------YAB1           ----- --ARR14(2)   --------->ANAC58          <---------ANAC58   ------>ZmHOX2a(1)    <---------At4g35610--   gggttctgtggaatcgaagcaagacccttagtaaaaagaattgctttctttgtcttctctcctccgagtcgttctgatttccagctctcgagctaaacac  7624100          --------->ANAC58          --------->ANAC58          --------->ANAC46   <----------DOF2                                                               --------->HSFB2a(2)  --------->TOE2(3)                                                       --------->MYB52(1) ----->AtMYB61                                                            ------>MYB83 ------MYB46(2)                                    --------->AHL20(2)     ------>MYB46(1) ----->MYB46(3)                                --------->AHL20(1)       <---------MYB111(1) ------MYB111(1)                               --------->AHL20(2)       <---------MYB46(2) ---->MYB83                                    <---------AHL20(1)       <---------MYB59 ---->ANAC58             *TSS  --------->TOE2(3)  <---------AHL20(2) ------>NtERF2     --------->ANAC58 ---->ANAC46          <-----------GT1          <---------ARR11(3)   --------->DEAR3(1) --------->ANAC58 ---->ANAC58       <----------DOF2            ----------->TBP    --------->ANAC46<---------HSFB2a(2) ---->MYB46(1)  <---------ARR11(3) --------->TOE2(3)<---------AHL20(2)  --------->AtMYB61           <   caaacctttttctcgcaatttctttcaccatttccttcattaatctctatatattaattcattctccacgacgacctaaccttctcgacaaacaagaggg  7624200                             ------>MYB83                             ------>MYB46(1)                            --------->WOX13(1)                           --------->AtMYB61                        <---------WRKY18(1)                     <---------DAG2                       --------->WRKY38(1)                      <----------DOF2                       --------->WRKY12                     <---------WRKY12                       --------->WRKY45                <---------DOF5.7(2)                    <---------ANAC46                   ---------->DOF2                    <---------YAB1 ---------YAB1     <-------TEIL                     <-------GAMYB                 <-----------GT1   ttctgatttcgaaattcaagcttcgttgaccaatccaaattttggtttaacttcggttaaagtcaactttacttcggttttatttttcaattttgaatga  7624300                       <------MYB83                       <------MYB46(1)                      --------->MYB59             --------->AHL20(2)             <--------HAHB4                                                                       <--             --------->ATHB51                                                          --------->YAB1             -------->ATHB1                                                          *TSS      <-----             <---------AHL20(2)                                         --------->ETT(2)       <-----            --------->ICU4                                              <---------ETT(2)    <--------            <---------ATHB12                            <---------AHL20(2)       <---------ANAC46----            <---------ATHB51                       ----------->GT1--------->TOE2(3) <----------DOF2 <          --------->WOX13(1)              ----------->GT1 <------------CBF       --------->ANAC58<---        ------------>CBF               <------------CBF--------->AHL20(2)        --------->ANAC58<---        <---------ATHB12      ---------->DOF2  <-----------GT1  <-------TEIL <-----------HVH21 <-----   gaaaaaccgaatcaattatttagttcggttcttaaagttcaaattggttaaaccggtttaaattgatacattagtcgaccgtcgcgcattaatactggtg  7624400          <---------DOF5.7(2)        <---------MYB52(1)        --------->DOF5.7(2)       <-------GAMYB                                                                        <--------      <---------ANAC46                                                                     --------->DEAR3(1)   --------->ARR14(2)                                                                    --------->LBD16   <---------ARR14(2)                                                                    ------>NtERF2 --------->MYB55(2)                                                                     --------->DEAR3(1) <---------MYB46(3)                                                            <---------ALFIN1 -------ANAC46                                                                 --------->AtMYB61 ----ANAC58                                         --------->DEAR3(1)        --------->MYB46(3) ----ANAC46           <---------DEAR3(1)          --------->ZAT2           --------->MYB46(3)    <--- ---RAV1(1)         ------->GAMYB                 <---------At4g35610      <---------MYB55(2) ------- ----->ALFIN1 --------->ANAC46             --------->REM1(1)        --------->DREB2C(2) --------->ANAC46 ---------AtMYB61--------->MYB52(1)       ------>MYB46(1)        <---------ALFIN1  <-----------HVH21 --------------------TaNAC69(2)           ------>MYB83<------NtERF2 --------->DEAR3(1) <---------LBD16 ------AtMYB61--------->ANAC58          <---------MYB59    ------>ZmHOX2a(2)--------->AtMYB61<------- ----ANAC58   --------->ANAC58  --------->ARR11(3)--------->At4g35610<-----------HVH21 --------->ATERF1(1)   tggtggttccgttaacgagcaacggcgatgaagagacctcgacctacatctcagccgtcgatctcttccaccgtcaaaccaccactgtctccgccggtca  7624500                                                                           ===============MYC_MYB                                                                           <---------ANAC58                                                                           ========================bZIP_DOF                                                                           <---------ANAC58                                                                           <---------O2                                                                           <---------TGA1a                                                                           --------->O2                                                                         <---------TGA2(2)                                                                        ----------->HVH21           -                                                                        ----------->TGA1<----------DOF2                                                                      --------->ZAT2    =============                                                                      <---------At4g35610          <-                                                                      --------->At4g35610         ---                                                                  --------->ANAC58      <---------DAG2                                                                  --------->ANAC58 <---------MYB52(1)                                                                  --------->ANAC46 --------->DOF5.7(2)                                                                 <---------LBD16  <-------GAMYB  <---                                                              <---------ALFIN1    <---------RAP2.6(3)                                                             ========================MYC_MYB    -----                                                             ========================================  --------->ARR14(2)                                         ------->GAMYB <---------bZIP60(2)  <----  <---------ARR14(2)                                       ==========================MYC_MYB    -----  <---------GLK1(2)           <------ZmHOX2a(1)            ========================================== -DEAR3(2)            --------->ANAC46                     -------->P <---------ZAT2 <---------DOF5.7(2) ------ALFIN1   --------->At4g35610             ----------->GT1 <---------ALFIN1  =================== ---->HVH21    --------->ANAC58     --------->TOE2(3)     --------->MYB52(1) --------->DOF5.7(2)<---- ----HVH21     --------->ANAC58  <---------ALFIN1       <---------MYB52(2)<---------TOE2(3)  --------   caccgattctcaaacagaagctacacagaacaggaacacctaaatggttcccgttaaaactaacccacacggagctgacgttgccgttaacttttccgac  7624600     --------->HSFB2a(1)     <---------ICU4    <---------ATHB12 -------->WRKY18(1) =====bZIP_DOF ----------HVH21 -------->GT1 ------MYB46(3) ---->O2 =====MYC_MYB -----O2 <---------LBD16                        --------->ATHB12                          ----------- ---->TGA1a                              <---------LBD16                                 --------->ATERF1(1) =====MYC_MYB                         <---------ZAT14                                 <------ZmHOX2a(1) =====MYC_MYB                         --------->ZAT14                              --------->HSFB2a(2) -----TGA1a  --------->ALFIN1         ---------->DOF2                              <---------HSFB2a(2) --->HVH21 --------->LBD16      --------->GLK1(2)        <------NtERF2             <-----------RAV1(2)   gggtcaaacattccggtggaagaaaactggagcgattcagtatagcggaacgattgggcctcacttagtctctcttagacaacgtccaggagacgacgca  7624700                                               <-------GAMYB                                              <---------ANAC46                                              <---------ANAC58                                          <---------ANAC58                                          <---------ANAC58                                         <---------ZAT2                                       <------NtERF2                                      --------->LBD16                            --------->At4g35610                                     <----------CDC5                             <---------At4g35610                                     -------------->OsCBT                        <---------ZAT2                                     --------->ANAC46                            --------->ZAT2                                    <---------LBD16                             --------->MYB52(2)                                    --------->At4g35610                       <---------MYB52(1)                                    --------->LBD16                       ------>ZmHOX2a(2)                                  <---------LBD16                        <------ZmHOX2a(2)                                <---------ARR14(2) <---------ANAC58     --------->ARR14(3)                                --------->ARR14(2) <---------ANAC58     <---------ARR11(3)        <---------ANAC58      ---------->DOF2 <---------ANAC58          --------->ARR11(3)        <---------ANAC46--------->ANAC58 --------->ZAT2                 <---------ARR14(3)        ---   ------>ZmHOX2a(1)    --------->ANAC46--------->ARR14(2)             --------->GLK1(1)          <-- >HVH21 <---------ANAC58--------->ANAC58<---------ARR14(2)            ----------->ARR10   <---------AtMYB61   gtttcctactgcgtccattgtagcacaagccctaaatccgcggagcttgcgttgctcgattttctcaatgctgagatctcgttagctgagctatggtctg  7624800              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <---------ARR11(3)            <---------GLK1(2)            --------->ARR11(3)            --------->ARR14(2)            <---------ARR14(2)                            --------->REM1(2)        <---------WOX13(1)            <---------ARR14(3)                           --------->ALFIN1         <---------ANAC58            --------->ARR14(3)                       =============MYC_MYB--------->At4g35610           --------->RVE1(1)                         --------->TGA1a  --------->ARR14(1)          ----------->ARR10                          <---------TGA1a  <------ZmHOX2a(2)        ---------->DOF2                          <---------ANAC58    <---------ARR14(2)  --------->HSFC1(1)                             <---------ANAC58    <---------ARR11(3)  <---------HSFB2a(2)                           <------NtERF2        --------->ARR14(2)  <---------HSFC1(1)                          --------->ALFIN1      <------ZmHOX2a(1)  --------->HSFB2a(2)                         <---------DEAR3(1)   ----------->ARR10               <- ------>GLK1(1)       <---------ANAC46       --------->LBD16  <---------TOE2(3)   <---------ANAC58 <- -------GLK1(1) ------>ZmHOX2a(1)          <---------LBD16<-------GAMYB------>ZmHOX2a(2)      -------   atttctcgaaaaaagatcctcgtttcggagagctagcgagacatctccgtggcgctcgtgtgttgaggcaggatccgctcgagtgcttgatacagttttt  7624900  Previous    Next  AGI:  At1g21700.1    Description:  ATSWI3C (Arabidopsis thaliana switching protein 3C); DNA binding. similar to CHB3 (Arabidopsis thaliana switch 3D), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34430.3); similar to CHB3 (Arabidopsis thaliana switch 3D), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34430.2); similar to CHB3 (Arabidopsis thaliana switch 3D), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G34430.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO61898.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); c Range:  from: 7619990    to: 7624125    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g21710.1    Description:  OGG1 (8-oxoguanine-DNA glycosylase 1). similar to 8-oxoguanine DNA glycosylase [Populus nigra] (GB:BAF03495.1); contains InterPro domain 8-oxoguanine DNA glycosylase, N-terminal; (InterPro:IPR012904); contains InterPro domain DNA glycosylase; (InterPro:IPR011257); contains InterPro domain Helix-hairpin-helix DNA-binding, class 1; (InterPro:IPR003583); contains InterPro domain Helix-hairpin-helix motif; (InterPro:IPR000445); contains InterPro domain HhH-GPD; (InterPro:IPR003265); contains InterPro domain Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal; (InterPro:IPR012294) Range:  from: 7624385    to: 7626105    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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