Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->LBD16                             ------>NtERF2                            --------->ANAC46          --------->ANAC58                       <-----------ARR10              --------->ANAC46                      <---------CCA1(2)               --------->ANAC58              <------ZmHOX2a(1)             ------>ZmHOX2a(1) --------->DEAR3(1)  ------->GAMYB         <---------At4g35610        <---------At4g35610<---------LBD16        <---------ALFIN1       --------->HSFC1(2)     <-------TEIL --------->TOE1(1)        --------->At4g35610           <---------HSFC1(2)     ----- <---------ATHB12XXXXXXXXXXXXXXXXXXXX>MIR780.2  ----------->RAV1(1)      --------->At4g35610   ------ ----->MYB46(3)  ------>ZmHOX2a(1)         <---------At4g35610  --------->MYB46(3)  =================   ccactgattcatctccttcctcgtaaatctccgccatcgaaatttagctccaacacacgcgaatcaacaaatcgaagcttacacgaggaagacaacgtaa  7216700                                                          --------->WOX13(1)  <------ZmHOX2a(2)           *TSS                      ------------>CBF ---->DAG2        <------ZmHOX2a(2)                 --------->ICU4        ---------->DOF2           < ---->DOF2      --------->At4g35610            --------->ANAC55(2)     ------------>CBF           --- ========HOX2a_HOX2a      --------->HSFB2a(2)  --------->YAB1    ---------->DOF2                 ----   agcgatcgaaacagagacagatcaatttctcgagtaaacgaggctattttcgtaatatttcaattagtaaaggcccaatagcccaagtagaagacaacgt  7216800                                                      <---------ICU4                                                  <---------AHL20(2)           ---------->DOF2                        --------->AHL20(2)                                <    <------ZmHOX2a(2)                            <---------ATHB12--------->YAB1                     < ---------------------WRI1                       --------->AHL20(2)                                 < ------>DAG2                         --------->YAB1   ---------->DOF2   ---------->DOF2          <--- ------>DOF2        <------ZmHOX2a(2)--------->ANAC55(2)        <---------ICU4               <-------   aaagcgatcgaaacaaagacggatcaaacgaggctattttcgtaatatccaattaataaaggcccattaataccaatagcccaagtcgaaagattacctc  7216900                                <------MYB46(1)                                <------MYB83                               --------->MYB111(1)                            --------->ALFIN1                                                        <                            <---------ANAC58                                                        -                            <------MYB46(1)                                                         <                            <---------ANAC58                                                        -                            <---------ANAC46                                                        -                            <------MYB83                                                            -                           --------->MYB111(2)                                                      -                           <---------AtMYB61                                                       <-                           <---------DEAR3(1)                                                     <--                           --------->MYB46(2)                                                     ===             <---------ARR14(2)--------->MYB55(2)                                                 ---    --------->WRKY18(1)    --------->MYB111(1)                                                    <--   <-----------HVH21       <---------MYB46(3)               --------->ANAC46                      === ---------ANAC58           --------->MYB55(2)     <---------ANAC58                              <---- ---------ANAC58          --------->ALFIN1      --------->ALFIN1------>NtERF2                   <---- ---------ANAC46<---------YAB1--------->ALFIN1<---------ANAC46--------->At4g35610  <---------MYB52(1) -------DOF2 <---------MYB52(1)--------->MYB111(2)<---------ANAC58       <---------MYB52(1)     <---- ----------AG--------->ARR14(2)<---------MYB46(3) --------->ALFIN1<-----------RAV1(2)          <-----   tttcgggtcaaaccggttatgtttatgggtgggtgggtagagcaagtcgagtgtgtgtgaacacagcgccaggctgtttgtctcagtttgtcaagttggc  7217000           --------->O2           --------->ANAC58           ==========================================bZIP_DOF           <---------O2           --------->bZIP60(2)           --------->ANAC46           --------->TGA1a           --------->ANAC58      <---------TCP20      <---------TCP16(1)     --------->ATERF1(1)     <------NtERF2    <---------ATERF1(1)    <---------MYB46(3) <------MYB83 <------MYB46(1) <---------ANAC58 <---------ANAC58 ---------MYB46(3) -------->MYB111(1) ---------AtMYB61 -------->MYB111(2) -------->MYB46(2) -------->MYB52(2)                                                   <----------DOF2 -------->MYB55(2)                        <---------DAG2            <---------ANAC58 --------MYB55(1)                         <----------DOF2           <---------ANAC58 -----GAMYB<---------TGA1a          <---------TGA1a             <---------ANAC46 ====================MYC_MYB        --------->TGA1a             <---------ANAC58 -------------------->TaNAC69(2)    <---------O2                <---------ANAC58 -------MYB52(1)                    --------->O2            <---------DAG2 =============================================MYC_MYB   <---------WRKY38(1) -----ANAC58                        ============================================bZIP_DOF -----ANAC46                        ====================================bZIP_DOF -----ANAC58                        --------->ANAC55(2)--------->WRKY18(1) -NtERF2 <---------ALFIN1           =================bZIP_DOF<----------DOF2   gtttggtggctccacgtctctctctatctctctctctcacatgacttttcgattttagtcaacctttcgtgcttttctcttaaaaattcgattttttctt  7217100                                                                                                   --                                                                                                   <-                                                                                                  ---                                 <-----------GT1                                                  ---                              <----------DOF2            <-------PIF5             --------->ARR11(3)                              <---------DAG2       <---------HSFB2a(2)            <---------ARR11(3)                    <-----------GT1    <---------CCA1(2) ------->PIF5      --------->ZAT2   =========                 *TSS   ------>ZmHOX2a(1)          --------->HSFB2a(2)     --------->At4g35610 <-----                <---------MYB52(1) ----------->RAV1(2) <---------LBD16     <---------ZAT2   <------ZmHOX2a(1)   caacccatcttcttctctgttatttcctctcgcttttacctgtctctctcgttctcgcacggggatagaatcaactctgctcgagattttagtaggaggc  7217200        <---------ANAC58        <---------ANAC58                             <---------TOE1(2)   --------->ATHB12                                  --------->LBD16 ------->ZAT2        <-------TEIL                   <---------ANAC46 --------ZAT2       <------ZmHOX2a(2)        <----------DOF2 ------>ANAC58     --------->AGP1   --------->ARR11(3)                  <---------ARR11(3) ------>ANAC58   --------->MYB59    <---------ARR11(3)        <---------At4g35610    --------->ALFIN1 ==========================HOX2a_HOX2a    <---------ALFIN1    --------->At4g35610    <---------AtMYB61 -NtERF2<---------ANAC46         >>>>>>>>>TBF1     <---------LBD16      --------->ARR11(3)   aagctcgattgcttgcaattagatccatggatgaagaagaactcacactttctcgcgcgtttttagctcaaggagatttttgaagaagtggtcgttttcg  7217300                                                                  <------NtERF2                  <---                                                                  --------->ATERF1(1)        <-------                                                                 <---------DEAR4(2)         <--------                                                                 <---------ATERF1(1)        <--------                         <----------DOF2                        --------->ALFIN1            <--------               >>>>>>>>>TBF1<------------------------ANAC81     <---------DEAR3(1)        <------MYB83           <---------At4g35610       <----------DOF2           <------ZmHOX2a(1)          <------MYB46(1)           --------->At4g35610    <-----------GT1        <----------DOF2 <---------------AGL15   <---   aattgtcaacttcagaagaagaatcaactttggttttttcttttcccttctctgtatagctttgaggaggcgcttcttcaactggaacaggctggtgtgc  7217400                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                     <------MYB46(1)                                                                                     <------MYB83                                                                                    --------->MYB59                                                                              <---------------AGL15                                                                              --------------->AGL15                                                                             ----------------->AG                                                                             <-----------------AG                                                                             ----------------->AGL1       <-----------GT1                                                       <-----------------AGL1      <-----------GT1                                                        ======================== ------DAG2                                                                  ======================== --ZAT18                                                                     ----------------->AGL3 -ANAC58                                                  <---------ARR11(3) <-----------------AGL3 -ANAC58                                               <----------DOF2       <-----------------AGL2 -ANAC46<-----------------AGL1                 <-----------GT1          <---------KAN4(1)      <----- -------DOF2<----------DOF2                <---------MYB52(1)<----------DOF2 ----------------->AGL2   ttttttttttatctcttttggtatttttgaaatgcttcatgagacgttgtttctcttctttatctttttgacgaatattgctaaatttggtaatcttgct  7217500                                                   <---------TOE2(3)                                                   --------->MYB59       <-------TEIL                                <---------TOE1(3) -----------AGL15                          <---------ANAC58 ---------->AGL15                          <---------ANAC46 ------------AGL2                          <---------ANAC58       <---------WOX13(1)              --- ----------->AGL3  <---------YAB1         ---------->ID1        --------->ATHB12                ----- ============MADS_MADS                 <---------DAG2          --------->ICU4                  ------ ===========MADS_MADS--------->ARR11(3)<----------DOF2         <---------YAB1           <---------ANAC58 ------------AGL3  --------->ICU4  <---------MYB52(1)    <---------YAB1                 <---------ANAC58   atataagggttcatgggagtgatgattttgggacactgttacttttcgtattttaggttatagttatgattgaaagtttgaattttgtttccttggctgt  7217600  Previous    Next  AGI:  At1g20770.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN80128.1) Range:  from: 7215004    to: 7216730    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20780.1    Description:  armadillo/beta-catenin repeat protein-related / U-box domain-containing protein. similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76390.1); similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G76390.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP50990.1); similar to armadillo/beta-catenin repeat family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA97086.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66256.1); contains Inter Range:  from: 7217117    to: 7220773    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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