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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ATHB51
--------->
HSFC1(1)
<---------------
AGL15
<---------
HSFB2a(2)
<----------
DOF2
<---------
HSFC1(1)
--------------->
AGL15
---------->
DOF2
--------->
HSFB2a(2)
<-----------------
AGL3
<
-----
GT1
<---------
ICU4
<---------
YAB1
<-----------------
AGL2
<
aacttggaaagtgaatggaagttttaagagaaaaatcatttctagaattattttttagatcatttctttttttggagcatccattagagttttgttttta
7142700
<---------
WOX13(1)
<--------
ATHB1
--------->
YAB1
-------->
ATHB1
<---------
ICU4
--------->
ATHB12
<<<<<<<<<<
GT-3b
--------->
ATHB51
<---------
AHL20(2)
<---------
YAB1
<----------
DOF2
----
--------->
AHL20(2)
<---------
ATHB12
------->
TEIL
----
<---------
AHL20(2)
<---------
ATHB51
<---------
CCA1(2)
-----
--------->
ATHB12
<---------
At4g35610
--------->
AHL20(1)
--------->
At4g35610
<---------
YAB1
--------->
At4g35610
--------->
ARR11(3)
--------->
ZAT14
----------
DOF2
--------->
YAB1
---------->
DOF2
<-----------
GT1
<---------
ZAT14
---------
DAG2
<----------
DOF2
--------->
ICU4
<---------
ARR11(3)
--------->
ANAC46
gactttatgatttatttttcttttgttatcagcacaataattgattttcaaaagatattgtatcttttttttatctcttgagaagcacagcacaacaacg
7142800
<--------
HAHB4
--------->
YAB1
<---------
ICU4
--------->
ICU4
------>
MYB46(1)
<------
NtERF2
--------->
MYB52(1)
<----
<---------
At4g35610
<---------
SPL7
-----
<---------
WRKY38(1)
--------->
DEAR3(1)
<----
<---------
WRKY12
<---------
MYB52(2)
------
--------->
ATERF1(1)
<---------
MYB46(2)
--------->
ARR11(3)
<------
NtERF2
--------->
ANAC58
<-----------
ARR10
<---------
ANAC46
--------->
ANAC58
<------
MYB46(1)
<---------
ARR11(3)
<---------
ANAC58
<---------
YAB1
--------->
MYB46(3)
<------
MYB83
--------->
CCA1(1)
<---------
ANAC58
<---------
ATHB51
------>
MYB83
--------->
ALFIN1
--------->
RVE1(1)
--------->
ICU4
<-----------
HVH21
<-----------
GT1
<-------
GAMYB
--------->
AHL20(2)
----->
ANAC58
<---------
LBD16
<---------
YAB1
<---------
ANAC58
------>
MYB46(1)
<------
----->
ANAC58
--------->
ETT(1)
<---------
YAB1
<---------
ANAC58
------>
MYB83
<------
-->
GAMYB
<-----------
HVH21
--------->
ICU4
------->
TEIL
<--------
P
--------->
TOE1(2)
--------->
ALFIN1
agcaatgctgacttgtcggggtcagcgattattattagtcaccgaacgaatttttcttgggttggagccaaaacctagcaaaaaaatatctaagtggggg
7142900
--------->
HSFB2a(2)
<---------
HSFB2a(2)
-------
------>
ZmHOX2a(2)
<------
--------->
ATHB51
--------->
HSFB2a(2)
<------
<---------
YAB1
<---------
HSFB2a(2)
<-------
--------->
TOE2(3)
----------->
GT1
--------------->
AGL15
<------
ZmHOX2a(1)
<
--
NtERF2
--------->
DAG2
================================================
---->
ZAT18
---------->
DOF2
<---------------
AGL15
<----------
ID1
<-------
-----
ZAT18
--------->
ANAC58
<---------
At5g28300
===============
HOX2a_HOX2a
-
>
NtERF2
--------->
ANAC58
<-----------
GT1
--------->
ARR11(3)
------->
TEIL
<-
---
PCF2
--------->
ZAT6
<---------
ICU4
<------------
CBF
<-----------
GT1
---
RAP2.3(3)
<-----------
GT1
<<<<<<<<<<<<<<<<<
LFY
----------->
GT1
---------->
DOF2
--------
cactacattattgttttaacaccaaggaaaagtaaacaacaatggcccatttttactgtatcgagaaattgatctcgaaaggacaaatgtacccttccac
7143000
<------------
CBF
<---------
ICU4
--------->
ATHB51
--------->
ICU4
<---------
YAB1
<---------
ARR14(2)
--------->
ZAT6
--------->
GLK1(2)
==================================
HOX2a_HOX2a
--------->
ARR14(2)
------>
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
GLK1(1)
===================================
HOX2a_HOX2a
-------->
AGL15
--------->
GLK1(1)
---------
AGL15
<---------
ARR14(2)
<----
---
ALFIN1
-------->
ATHB1
*
TSS
<---------
ALFIN1
xxxxxxxxxxx
----------
AGL1
<-----------
ARR10
---------->
DOF2
---------
HSFB2a(2)
--------->
ARR14(2)
===============
=========
MADS_MADS
----------->
TBP
<---------
AGP1
------>
ZmHOX2a(1)
----------
AGL2
<-----------
GT1
--------->
ARR11(3)
--------->
TOE2(3)
-------->
HSFB2a(2)
--------->
ANAC58
<---------
ARR11(3)
<---------
ARR11(3)
--------
LBD16
--------->
ANAC46
<------
ZmHOX2a(1)
<---------
ARR14(2)
--------->
AGL1
--------->
ANAC58
<----------
DOF2
--------->
ZAT14
--------->
ARR14(2)
<
ttcgggaatccattattgtgcataacacacgctgtttcactatatatactttcaca
taggatctcaacactctcactaaaccaaaatcctcaaaagccta
7143100
---
<--
<---------
ARR11(3)
---
------->
TEIL
--------->
ARR11(3)
<---
-------->
P
<---------
ARR14(2)
------->
TEIL
=====================================
HOX2a_HOX2a
<---------
ANAC46
<------
ZmHOX2a(2)
========================
HOX2a_HOX2a
<---------
AtMYB61
--------->
ARR11(3)
------>
ZmHOX2a(2)
--------->
ALFIN1
<---------
ARR11(3)
<------
ZmHOX2a(2)
<---------
DAG2
<-----------
RAV1(1)
-----
ARR14(2)
------->
TEIL
--------->
ARR14(2)
<-----------
GT1
<---------
ANAC46
xxxxx>
smallRNA(le3)
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ANAC58
-
============
HOX2a_HOX2a
<---------
ARR14(2)
--------->
YAB1
<----------
DOF2
<---------
ANAC58
-
---------
LBD16
--------->
YAB1
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
<----------
DOF2
<---------
ANAC46
tttgggggatcatcaaccttctatcatcacc
atggatccttacaag
gtatcttcgatcatattcttcttactttttctttgtttttgtgtggtgtatgtg
7143200
--------->
MYB59
--------->
YAB1
------>
ARR14(2)
--------->
TOE2(3)
-------
ARR14(2)
--------->
ARR14(2)
<---------
TOE2(3)
---->
TEIL
<---------
TOE2(3)
<---------
WOX13(1)
----------->
GT1
------
CCA1(2)
<------
MYB83
--------->
ATHB12
<---------
ARR11(3)
-------->
YAB1
<------
MYB46(1)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
DAG2
-------->
TOE2(3)
<-------
TEIL
<---------
YAB1
<---------
CCA1(2)
<---------
tatcttaattagaattaggttcaactatatatgctcgttttctaaactattttttaattggattgatgttcttaaatcttaagggtcaaaatacttttta
7143300
--------->
TOE2(3)
--------->
YAB1
--------->
AHL20(2)
--------->
TOE2(2)
<---------
AHL20(2)
<--
--------->
TOE2(3)
--------->
AHL20(2)
<--
--------->
TOE1(2)
<---------
AHL20(2)
<--
------->
TEIL
--------->
TOE2(3)
---------
<---------
ANAC46
===========================
------>
ZmHOX2a(2)
<---------
ANAC58
----------->
GT1
----------->
HVH21
<---------
ANAC58
<---------
AHL20(2)
-
DOF2
--------->
GLK1(2)
<---------
MYB59
<---------
GLK1(1)
<----------
DOF2
<----------
tgctcaaaaacttacttaaattctgtgatcgcttgaacctaagttgatgatgttgatttctgttttggctggctatctttaattaaaacgtttaaccact
7143400
<-------
MYC3
<-------
MYC3
------->
MYC3
<---------
O2
<---------
TGA1a
--------->
TGA1a
--------->
bZIP60(2)
--------->
TGA1a
<-------
MYC3
--------->
ANAC55(1)
<--------
--------->
ANAC46
---------
--------->
ANAC58
<---------
YAB1
======================
bZIP_DOF
--------->
YAB1
---------->
DOF2
------->
MYC3
<---------
ICU4
=================
bZIP_DOF
------>
ZmHOX2a(1)
<---------
YAB1
-------
ANAC58
--------->
O2
--------------->
AGL15
--------->
ICU4
-------
ANAC46
<---------
ALFIN1
--------->
TOE1(3)
--------->
YAB1
-------
ANAC58
----------->
RAV1(1)
--------->
TOE2(3)
<---------
ICU4
------
>
MYB46(3)
--------->
O2
<-----------
GT1
<---------
AHL20(2)
<-----
====================
bZIP_DOF
---------->
ID1
<---------
YAB1
--------->
ANAC46
-
GT1
--------->
ANAC58
<-----------
RAV1(1)
<-----------
RAV1(1)
<---------
YAB1
------->
MYC3
gcgtgagaaagacacgccacatgtggtttttgttgtttttttccttagattagaagttattttgttgttgtttttttttttattattattacacacatgt
7143500
--------->
GLK1(1)
<---------
bZIP60(1)
<---------
AHL20(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
HSFB2a(2)
----------->
HVH21
--------->
bZIP60(1)
<--------
<---------
HSFB2a(2)
<-----------
HVH21
<---------
GLK1(1)
---------
-
TGA1a
<---------
AHL20(2)
--------->
SPL7
<---------
ZAT6
<---------
ATHB12
>
TGA1a
<-------
TEIL
<---------
SPL7
<---------
AHL20(2)
--------->
ANAC55(2)
->
MYC3
--------->
SPL7
<---------
YAB1
--------->
TGA1a
<---------
YAB1
--------->
At4g35610
--------->
ICU4
--
MYC3
<---------
TOE1(2)
<---------
TGA1a
<---------
AHL20(2)
<---------
ANAC55(2)
gttctaaaaatcggacgttcaaatgatataatcgattgtttagacgtccgaccgtatattattttagtgatatcagccaaatcagattaagtaatcatca
7143600
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AGI:
At1g20620.1
Description:
CAT3 (CATALASE 3); catalase. Identical to Catalase-3 (CAT3) [Arabidopsis Thaliana] (GB:Q42547;GB:Q93VY9;GB:Q9LDS9); similar to CAT1 (CATALASE 1), catalase [Arabidopsis thaliana] (TAIR:AT1G20630.1); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.2); similar to CAT2 (CATALASE 2), catalase [Arabidopsis thaliana] (TAIR:AT4G35090.1); similar to catalase [Brassica napus] (GB:AAB53101.2); similar to catalase 3 [Raphanus sativus] (GB:AAD30292.1); similar to catalase 2 [Raphanus sativus] (GB:AAD30291.2); contains InterPro domain Catalase, N-terminal; (InterPro:IPR011614); contains InterPro domain Catalase; (InterPro:IPR
Range:
from: 7143057
to: 7146530
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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