Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     ------>NtERF2  --------->RAP2.3(3)  --------->DEAR3(1)  --------->DREB2C(2)  ----------->HVH21 --------->RAP2.3(1) --------->ORA47(2) ----->NtERF2 -------->LBD16 ---------ATERF1(1) -------->At4g35610 --->ZmHOX2a(2) ----->CCA1(2) ----->ARR14(1)                                                                                  ---- ---ZmHOX2a(2)                                                                                   <--- ---->ARR14(2)                                                          --------->WOX13(1)    ------- -----GLK1(2)       --------->ANAC55(2)                               <---------MYB52(1)     <------- -----ARR14(2)      <---------ANAC58                                 <-----------HVH21     <---------ANAC46 ---->AGP1          <---------ANAC58                                 --------->LBD16      <---------LBD16 ----At4g35610     <-----------------AG                        <----------TaMYB80    --------->YAB1 --->At4g35610     <---------TOE2(3)  ----------->GT1          <----------DOF2---------->ID1--------- ---->ARR10 <----------DOF2      --------->YAB1--------->TOE2(3)    <---------ANAC55(2)--------->At4g35610 --TaNAC69(2)      <-----------------AGL1      --------->TOE1(3)    <---------ANAC46<---------YAB1   tccgccgactcgggctatacttacgtttttggaaagaataatgtgaaaaccctaatttgtaagggctattccgtcaattagtcgttatcatctccgtgaa  6971100                            <-----------GT1                     <---------At4g35610                  --------->TGA2(2)                 <-----------TGA1                 <-----------HVH21                --------->REM1(1)                --------->bZIP60(2)                --------->ANAC55(2)                --------->ANAC46              <---------ANAC58                <---------ANAC55(2)           <---------ANAC46  <-----------HVH21  --------->At4g35610      <---------ANAC58 ----->ZAT2     --------->ANAC58          ------>ZmHOX2a(1) ------ZAT2     <---------bZIP60(1)       <----------DOF2             --------->ATHB12 --->DOF2       --------->ANAC58      <-----------GT1                 --------->ATHB51 --MYB52(1)     --------->bZIP60(1)  <-----------GT1                 <---------YAB1          -------- >LBD16        <-----------STF1  <----------DOF2  <----------DOF2<----------DOF2        <----------ID1   gctcggtccgagtttgctacgtcatctgaaataccctttttatcctttgcgtctttcttactccaaactttattattgggcttaacaaaaactacaaaag  6971200                                    <---------AHL20(2)                                    <---------YAB1                                   <---------AHL20(2)                               <---------AHL20(2)                              <---------AHL20(2)                              <---------AHL20(1)                              --------->AHL20(2)                           --------->ATHB51                           --------->YAB1                     <------ZmHOX2a(1) <---------WOX13(1)                                   ---------                 <---------TOE1(1) --------->AHL20(2)                                    <---------AtLEC2                 <---------TOE2(1)--------->YAB1                                   <---------YAB1          --------->YAB1   <--------HAHB4           <---------AHL20(2)          <---------SPL7          --------->TOE2(3)<---------ICU4          <---------YAB1               ------>ZmHOX2a(1)    >>>>>>>>>>>>>>>>>LFY  --------->ICU4        <---------YAB1                 <---------ANAC58 -->DOF2 ----------->GT1  --------->AHL20(2)<----------DOF2                    <---------ANAC58   cccaaaacccaatgttaatacgaggagaataattaattttaattgactttgtgattaatgggtctcttgtccgacttggttccttacgcttgcatagaaa  6971300                                                                                    --------->ICU4                                                                                  --------->YAB1                                                                            <-------MYC4                                                                            ------->PIF5                                                                            ------->MYC4                                                                            <-------MYC3                                                                            <-------PIF5                                                                            ------->MYC3                                                                            <-------MYC2                                                                            ------->MYC2                                                                           --------->TGA1a                                                                           <---------ANAC46                                                                           <---------TGA1a                                                                           <---------O2                                                                           <---------ANAC55(2)                                                                           --------->O2                                                                           ==========================                                                                           <--------ABF1                          ----------->GT1                              ------>NtERF2<---------YAB1                          <<<<<<<<CAMTA3                            <---------At5g28300 --------->AHL20(2)                        --------->ANAC55(2)                        <-----------GT1<--------HAHB4                     ----------->HVH21                          <---------YAB1   <---------YAB1     -     --------->REM1(1)  <---------ANAC55(2)            --------->MYB52(1) ------>NtERF2 <---------AHL20(2) --------->At4g35610<-----------HVH21  <---------CCA1(2)     <-------TEIL<---------ALFIN1<---------AHL20(2) -->GT1      <-----------RAV1(1)  <-----------GT1    <---------ATHB12 --------->ANAC46 <---------YAB1   aacagctacaattatctgtgggcatcacgcgttaaaaaaccatctcttacttctaatcaacggttcattataccgccacgtgtattattattaaatatac  6971400                                             <---------WRKY18(1)          <------NtERF2                     --------->WRKY12        --------->ANAC46             --------->KAN4(2)       <---------LBD16             --------->ARR14(2) --------->DAG2                   ------>MYB83 ==========bZIP_DOF    ------>ZmHOX2a(1)    --------->WRKY38(1)               <-----------TGA1 --------->DOF2 ------------>CBF  ------>MYB46(1)                           *TSS   aaaaaagttcgcggcacagacaatccttccctcaccaaatattcccttgactctctcgatctatctttcatcttcatcttcgtcatcgtttccaatttcc  6971500                           <------ZmHOX2a(2)                       <------NtERF2                      ------>NtERF2                     --------->DEAR3(1)                  --------->DEAR3(1)               <---------ICU4                                                --------->AtMYB61               --------->YAB1                                 --------------->AtSPL3              <---------ATHB12                                --------------->AtSPL8   --------->GLK1(2) --------->At1g77200     ----------->RAV1(1)       --------->YAB1               - <---------AHL20(2) --------->RAP2.3(1)   --------->AtLEC2<---------YAB1 --------->MYB46(3)     <----   gatataatctgatcaaatcatcgccgacgatcaccgattcagcgatgcaacagggagattacaattcgtactatcaccaccaatactctcaatttcaaaa  6971600                                              --------->ATERF1(1)                                              <------NtERF2                                             --------->ANAC58                                             ------>NtERF2                                             --------->LBD16                                             <---------ATERF1(1)                                             --------->ANAC58                                            --------->ATERF1(2)                                            <---------ATERF1(2)                                            <---------DEAR3(1)                                            --------->DEAR3(1)                                            --------->RAP2.3(3)                                            --------->RAP2.3(2)                                            --------->RRTF1(2)                                            --------->RRTF1(3)                                           --------->RAP2.3(1)                                           <------NtERF2                                           <---------LBD16                                           --------->ATERF1(1)                                           --------->RRTF1(1)                                           --------->ERF1                                           --------->DEAR4(2)                                          <---------RAP2.3(1)                                          <---------ATERF1(1)                                          <---------DEAR4(2)                                          <---------RRTF1(1)                                          <---------RAP2.6(1)                                          ------>NtERF2                                          <---------ERF1                                          --------->ABI4(2)                                         --------->DEAR3(1)                                         <---------DEAR3(1)                                        <---------ABI4(2)                                        --------->ATERF1(1)                                        <------NtERF2                                        --------->DEAR4(2)                                        --------->ERF1                                        --------->RAP2.3(1)                                        --------->RAP2.6(1)                                        --------->RRTF1(1)                                       <---------RRTF1(1)                                       ------>NtERF2                                       --------->LBD16                                       <---------DEAR4(2)                                       <---------RAP2.6(1)                                       <---------ATERF1(1)                                       <---------ORA47(2)                                        ----                                       <---------DEAR3(2)                                        ----                                       <---------ERF1                                            <---                                       <---------RAP2.3(1)                                      <----                                      --------->RAP2.3(2)                                       -----                                      <---------DEAR3(1)                                       ------                                      <---------ATERF1(2)                                      ------                                      --------->DEAR3(1)                                  <----------                                      --------->ATERF1(2)                           <---------SPL7---                                      <---------RAP2.3(2)                          --------->ANAC58                                      <---------RAP2.3(3)                          <---------ANAC55(2)                                     --------->ATERF1(1)                           --------->ANAC55(1)                                     --------->ORA47(2)                            --------->ANAC55(2)                                     --------->ERF1                 <---------ARR14(2) --------->ANAC46                                     --------->RAP2.3(1)            --------->ARR11(3) --------->ANAC58                                     <---------LBD16          ----------->HVH21    --------->ANAC58                                    ------>NtERF2       <---------ANAC58           --------->ANAC46--            ------>ZmHOX2a(1)       --------->LBD16     <---------ANAC58          <---------------AtSPL3          --------->YAB1            <---------ATERF1(1)<---------ZAT2             --------------->AtSPL3        --------->ARR14(2)         --------->ANAC46    --------->ZAT2<------ZmHOX2a(2)------->TEIL---        <---------ARR14(2)        <---------LBD16  ------->GAMYB    --------->ARR14(2)--------->SPL7<        --------->GLK1(2)  <---------ATHB12--------->ORA47(2)--------->SPL7       <---------------AtSPL8        <---------ARR11(1)--------->ARR14(2)--------->DREB2C(2)     <---------ARR11(3)<-------TEIL<-- ----->ZmHOX2a(1) ------>ZmHOX2a(1)--------->DEAR3(1)  <---------At4g35610  --------->ANAC46  ------- -----ARR11(3)  --------->YAB1------>ZmHOX2a(1)   <------------AtMYB77------>ZmHOX2a(2)--------->ANAC58   tcctactccgaatcctaatcctaatcccaatccttctccgccggcgccggcaaccgtagctggtccgaccgatcttactcgaaacacgtacgcatcagcg  6971700            <---------MYB46(3)          <---------MYB52(1)        <---------ATERF1(2)        <---------DEAR3(1)        --------->DEAR3(1)    --------->WRKY12    --------->WRKY38(1)    <---------ZAT14    --------->ZAT14   --------->DOF5.7(2)   <-----------HVH21    <---------At4g35610   <---------MYB52(1)<---------ATERF1(1) ----->ERF1<---------DEAR3(1) ----->ATERF1(1)    --------->ARR14(2) ------ABI4(2)      <---------ARR14(2) -----ATERF1(1)  <---------TOE1(3) ->NtERF2------------>AtMYB77 --->ANAC46<---------ANAC46                                   <---------ANAC58 --->DEAR3(1) <---------MYB52(1)                              <---------ANAC58 -HVH21<---------LBD16  --------->LBD16                     --------->MYB52(1) ------>DEAR3(1) <---------TOE2(3)                         ------>ZmHOX2a(1)                      --- ---->NtERF2<---------DEAR3(2)                         --------->ANAC46                      <------- --------------->SPL14  ------>NtERF2                --------->ZAT6                          <------- ------NtERF2 --------->ARR14(2)                   <-----------GT1                           -------- -------ALFIN1<---------ARR14(2)             --------->ANAC46 <---------ANAC46           ------>ZmHOX2a(1) -->At4g35610<-------GAMYB                 <-----------GT1 <---------SPL7                <-----------HVH21   ccaccgttcaccggcggttacggttccgccgattactctaactattcacagaattacactccttacgggcaaaactctgagcatgtccctccttcagctc  6971800                                          --------->REM1(1)                                          <---------bZIP60(1)                                          --------->bZIP60(1)                                         <------NtERF2                                        ----------->RAV1(1)                                       --------->DEAR3(1)                                       ----------->HVH21                                       <---------ETT(2)                                      --------->ATERF1(1)                                      --------->RAP2.3(1)                                     <---------RAP2.3(1)                                     --------->LBD16                                     ------>NtERF2                                  <---------ALFIN1                                     <---------ATERF1(1)                            --------->DEAR3(1)                                    --------->DEAR3(1)                              --------->AtMYB61                                    <---------ATERF1(2)                            --------->MYB46(3)                                    --------->RAP2.3(2)                          --------->AtMYB61                                    --------->ATERF1(2)                          ------->GAMYB                                    <---------DEAR3(1)                          <---------MYB111(2)                                   --------->ORA47(2)                           <---------MYB55(2)                                   --------->RAP2.3(1)                          --------->MYB46(3)                                   <---------LBD16                             -------->P                                   --------->ERF1                              ------>MYB46(1)                                   --------->ATERF1(1)                         ------>MYB83  --------                                  <---------ATERF1(1)                        ------->GAMYB   <-------                                  --------->LBD16                            --------->AtMYB61                                 --------->ANAC46                            --------->MYB46(3)                            ------>ZmHOX2a(1)                                <---------MYB111(1)                     ------->GAMYB------>NtERF2                             --------->MYB46(3)      --------->ANAC46   ------>ZmHOX2a(1)--------->bZIP60(2)               <---------MYB55(2) --->ZmHOX2a(1)      --------->AtMYB61<------NtERF2                         <---------MYB52(2)      < --At4g35610   --------->YAB1    --------->DEAR3(1)          <---------YAB1--------->ANAC46  -------- --ZAT2 --------->ZAT14 <---------ALFIN1------>NtERF2--------->TOE1(3)--------->TOE2(3)   <---------ALFIN1 ->At4g35610--------->AtMYB61   <---------LBD16      --------->TOE2(3)--------->TOE1(3)--------->AtMYB61   cttccttcacttcaccatcacaacctcctccttctccgccggcgacatcactaaaccctaattcttattcaaccttcaaccaaccaccacctccacccac  6971900                                                             ------>MYB46(1)                                                             -------->P                                                             ------>MYB83                                                            --------->MYB55(1)                                                           <---------MYB46(2)                                                           <---------MYB59                                                           --------->AtMYB61                                                           <---------MYB111(1)                                                         -------->P                                                      <---------At4g35610                   ================HOX2a_HOX2a       --------->ANAC46                   ------>ZmHOX2a(1)              --------->ARR14(2)                  --------------->AGL15           <---------ARR14(2)                 <-----------------AGL3         --------->LBD16  --------->ANAC58        <---------ALFIN1                       --------->ANAC55(2)                         --------->YAB1     --------->ANAC46        --------->ATHB12  <---------ANAC55(2)  ----------->RAV1(1)   <---------YAB1 ->DEAR3(1)      <-----------------AGL2    <---------ZAT14--------->MYB46(3)             --------->SPL7 --MYB55(2)      ----------------->AGL3    <---------At4g35610   --------->ANAC58      <---------SPL7 -------TEIL   --------->ARR14(2)      <-----------GT1--------->At4g35610      <-----------GT1  ----- ->MYB46(3)--------->TOE2(3)<------ZmHOX2a(2)  <---------ANAC46  --------->ANAC46   <---------At5g28300   gattcatccacaacctctatcctcttatggatcatttgattctactgctccgtatcagcaacctacctcgcaacatatgtattactcaccgtatgatcag  6972000  Previous    Next  AGI:  At1g20110.1    Description:  zinc finger (FYVE type) family protein. similar to phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis thaliana] (TAIR:AT3G14270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60954.1); contains InterPro domain Zinc finger, FYVE-type; (InterPro:IPR000306); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 6971476    to: 6974826    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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