Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------MYB59                                                                      --------->TOE2(3)                                             --------->ZAT14         ----------------->AG                                             <---------ZAT14         ----------------->AGL1    <-----                                      <---------ZAT14            <----------TaMYB80           <------                                      --------->ZAT14           ---------->TaMYB80            -------    --------->TOE2(3)            --------->ZAT18             ----------->GT1             ----------->GT1 ----------->RAV1(1)        <---------AHL20(2)              <---------TOE2(3)        --------->ARR11(3) ->RAV1(2) --------->ATHB12 --------->AHL20(2)        <---------YAB1 <-----------------AGL1 <--------   gaacaacataaacttattggattttaaaatttatatgcactatacactgtagacttgtaatagaggtatatacctaaatgggcctaagaaattgttacat  6961800 ----MYB59                                                      <---------YAB1          ============= ---ANAC55(2)                       --------->ANAC58            <---------AHL20(2)      ------>ZmHOX2a(2) -->ANAC55(2)   ---------->DOF2     --------->ANAC58      <---------TOE2(3)     <---------ATHB12  --- ---GT1      --------->TOE2(3)--------->ICU4      <---------REM1(1)           --------->WOX13(1) <---   aacttacattataaacatcaaagagaagattaatgagtaagcaatgtagaagttgaagcaaaggtttttattgaaatagacaatcactgatcccttgcaa  6961900                                                --------->MYB52(1)                                            ------>MYB83                                            ------>MYB46(1)                                          <---------MYB59                                          --------->AtMYB61                                          ------->GAMYB                                         --------->MYB46(3)                     ------->GAMYB     ------>ZmHOX2a(1)              --------->TOE2(3)                        --------->MYB52(1)     --------->ICU4               <---------ARR11(3)                         ---------->DOF2 ===========HOX2a_HOX2a           <-----------ARR10                  --------------->AtSPL3     ----- ------->DOF2     <---------YAB1  --------->ARR11(3)       --------->YAB1<-------TEIL        <------- ------ATHB12--------->ETT(2)    <---------GLK1(2)   ------->TEIL  ------------------>SPL14 <--------   taaagtccttatttgtcgatactattgaaactacaaaatctcaaccaaacaaatggacgtttcatagtgagtccgtacataacgctcttgaaattttcct  6962000                                                                                  --------->GLK1(1)                                                                                 ---------->DOF2                                                                               --------->TOE2(3)                                                                              ----------->GT1     <------------MYB.PH3(1)                                                 <---------TOE2(3) ->ZmHOX2a(1)            ----------->GT1                 <---------ANAC46    <---------TOE1(3) ----GT1           <---------ANAC55(2)       ----------->TGA1        <----------DOF2          <------ ---GT1 <---------MYB52(1)      --------->YAB1--------->YAB1       ------>ZmHOX2a(1)          -------   attcgaaaccgttttttgatcaagtgaaggaaaatagtaatgagactatgacgatgatgctgggtattcctctttctctaacgtaaatcccttgggatat  6962100                                                                                                  <--                                                         <---------TOE2(3)                     <-----                                                         <---------TOE1(3)        <---------ARR14(2)                  <-----------GT1            <----------DOF2                      --------->GLK1(2)   --------->TOE2(3)                       <---------------AGL15     <---------ANAC58          <-----   --------->TOE1(3)          --------->AHL20(2)  <---------TOE2(3)  <---------ANAC46          <----- ---GLK1(1)     <---------AHL20(2)         --------------->AGL15     <---------ANAC58 --------->LBD16 -->GLK1(1)    --------->AHL20(2)  ------------>CBF    ---------->DOF2            --------->ARR14(2)   caaaacattaactgatatttaatcccttctaagtaaatgcaatttctcttttgagattaaaggttttgttttcgtagttgaaagaatccgaagagtgtct  6962200                                                                                        --------->ATHB12       --------->CCA1(2)                                                               <---------YAB1      <---------ARR14(2)                                                              <-----------HVH21      --------->ARR11(3)                              <---------WOX13(1)              <-----------TGA1      <---------ARR11(3)            --------->At4g35610 <------MYB46(1)        ------>ZmHOX2a(2)      --------->ARR14(2)            <---------At4g35610 <------MYB83          <------ZmHOX2a(2)    ----------->ARR10             --------->YAB1    --------->ATHB12         --------->MYB52(1)  <---------At4g35610         --------->KAN4(1)<---------ANAC58             ------->GAMYB   <-------- ---------HVH21               --------->ICU4   <---------ANAC58            <---------MYB52(2) ----ANAC58                  <---------KAN4(2) <---------ANAC46 --------->ARR14(2)   --------->YAB1 ----ANAC58           <---------O2<---------ICU4   <---------YAB1          --------->MYB46(3) ----ANAC46 <---------At4g35610--------->YAB1 <---------MYB46(3)<---------ARR14(2)<---------GLK1(2)   tgtcagaagatttgagttgatgagacatgggaataatcagcacaatattgggtgtgattggttttggatttggaacaacgatcggaatcgtcattggtta  6962300                                                           <---------YAB1                                                         --------->YAB1                                                        <---------YAB1                                                       <-----------GT1                                                      <-----------GT1                                                      --------->YAB1                                                  --------->AHL20(2)                          <---------TOE2(3)       <---------AHL20(2)                   --------->TOE2(3)                      <---------At4g35610        <---------AHL20(2)                 <---------GLK1(2)                    <---------ZAT14           <---------AHL20(2)              --------->ATHB12 -MYB46(3)          --------->ZAT14          <---------AHL20(2)              ------>ZmHOX2a(2)   ctacttgttcatctatttccagtctactgatgttgaggcatgttttttttatttatttatcatttttgttgtgaattgatcgattggattcttaaaacat  6962400              <---------GLK1(1)            --------->ATHB12          <---------WOX13(1)              <---------TOE1(3)                                 <--------       --------->ICU4                     <---------TOE2(3)                                 <--------     ---------->DOF2                  <---------At4g35610                                  <---------ANAC58  --------->ANAC46                   ------->TEIL                       <---------MYB46(3) <---------ANAC58  --------->ANAC58            --------->AHL20(2)                     <----------DOF2 <---------YAB1  --------->ANAC58            <---------AHL20(2)            <---------TOE2(3)     <---------ATHB12<--   gtatacgaaaagattgatttctcaatttgtttttaaatgaagctaaggttttctatacttctaatgttcttctttggttagccaatgtttattgctttat  6962500                                 --------->ANAC58                                 --------->ANAC58                                 --------->ANAC46                              <------ZmHOX2a(2)                             --------->ARR11(3)                         --------->LBD16                         ------>ZmHOX2a(1)                        --------->TOE1(2)                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     --------->ARR14(2)                                                   <----------                     <---------ARR11(3)                                                --------->TOE2(2)                     <---------ARR14(2)                                        --------->LBD16                     --------->ARR11(3)                                       --------->LBD16 ------- -DAG2--------->ICU4=================HOX2a_HOX2a     <-------TEIL            <---------ANAC46<------- --DOF2             <------ZmHOX2a(1)   <---------MYB46(3)                   <---------LBD16--------- -------MYB46(3)  <---------TOE1(2)    <---------AtMYB61           ----------->RAV1(1)---------------   ttgttgacattatttgttcttaggatcctgagatcaagccattggtggagttagattcagagactatagcaacaatgttccctgaaatacctatgtgggt  6962600      =================HOX2a_HOX2a      ------>ZmHOX2a(1)      <---------YAB1  --------->ARR11(3) -RAV1(1)                                                                                      ====== ---->GT1                                 --------->ARR11(3)                                   ------ --MYB46(3)          ------->TEIL         <---------ARR11(3)               ----------->GT1     <----- >ALFIN1        ------>ZmHOX2a(2)        <---------CCA1(2)--------->ANAC55(2)            <----------DOF2 -->AGL1    <---------YAB1       <---------GLK1(2)        <---------ANAC55(2)    ---------->DOF2   gaaaaatcctgattttgatcgtgtatgtttcttcacattctctaaatcttcttagttaatacatattatggtctaatttgtaacaaagtctctttttcta  6962700  Previous    Next  AGI:  At1g20080.1    Description:  ATSYTB/NTMC2T1.2/NTMC2TYPE1.2/SYTB. similar to ATSYTA/NTMC2T1.1/NTMC2TYPE1.1/SYTA [Arabidopsis thaliana] (TAIR:AT2G20990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47374.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60961.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71066.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 6962227    to: 6964903    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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