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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                     <------ZmHOX2a(1)
                                                                    ----------->GT1
                                                                    --------->ANAC58
                                        --------->TGA1a             --------->ANAC58
                                        --------->O2                --------->ANAC46
                                        ================================================bZIP_DOF
                                        <---------TGA1a         --------->MYB52(1)
                              --------->ANAC58              <---------ICU4
                              --------->ANAC46             --------->AHL20(2)
                              --------->ANAC58             <---------AHL20(2)
----------->GT1             --------->ZAT6                 --------->ICU4
-------DOF2               <-----------GT1                  <---------ATHB51                <--------
------DAG2      <-----------GT1         <---------O2   --------->AHL20(2)     --------->DAG2
-----GT1      <---------MYB52(1)   ----------->HVH21 --------->TOE2(3)       ---------->DOF2  <-----
 
tttttgttaaaaaaactgttaactatttgttacactcaatgacacgagtgaataaaacttaaataattaacaggaaacaaaaaagcgtagggaatttatc  6778600
                                               --------->AHL20(2)
                                               <---------AHL20(1)
                                               --------->AHL20(1)
                                   --------->AHL20(2)
                                   <---------AHL20(2)
                                   <---------AHL20(1)
                                   --------->AHL20(1)
                                  <---------AHL20(2)
                                  --------->AHL20(2)    --------->YAB1
       <-----------GT1        --------->AHL20(2)       <---------YAB1
      <---------YAB1          <---------AHL20(2)     <-----------GT1
    <---------ICU4            --------->AHL20(1)    <---------AHL20(2)
   <---------MYB52(1)    <---------AHL20(2)    <---------AHL20(2)
 ----------->GT1         --------->AHL20(2)   <---------AHL20(2)
-AHL20(2)          <---------AHL20(2)         --------->AHL20(2)                                  --
----At4g35610     --------->AHL20(2)    --------->TOE2(3)                    --------->ICU4---------
 
tgatcagttattactgacctataaaattttaaataaaataaattcttaattttattttatcatatgctgtacaaaatgcaatgtttgatgcacaaaatgc  6778700
        --------->ANAC55(2)
        <---------ANAC55(2)                     <---------YAB1
      <-----------GT1                           <---------TOE2(3)
  --------->AHL20(2)                      --------->AHL20(2)
  <---------AHL20(2)                  <---------YAB1<-------TEIL
--------->GT1            <---------ZAT18  <---------AHL20(2)               <---------YAB1     ------
->DOF2--------->AHL20(2)<-----------GT1 --------->TOE2(3)      --------->YAB1   <-----------GT1-----
 
gatgttaaattacttaatacgttgattttgcacttctcattttcattaattaagattcattttttatcaaaaaaaactactattaactatttgttatcct  6778800
                                                                       --------->ATHB51
                                                        --------->AHL20(2)
                                                        <---------AHL20(2)
                                                       --------->AHL20(2)
                                --------->ANAC58       <---------AHL20(2)
                                --------->ANAC58       --------->AHL20(1)
                         --------->TOE2(3)             <---------AHL20(1)          <---------AHL20(2)
    --------->ANAC58    <---------ICU4          ---------->DOF2        --------->ATHB12
    --------->ANAC58    --------->YAB1       ----------->GT1          <---------YAB1
<------ZmHOX2a(1)       --------->ATHB12     <---------ANAC46         --------->ICU4               <
--->TOE2(3)            <---------ATHB12      <---------ANAC58      <---------MYB52(1)           <---
->ZmHOX2a(1)     --------->TOE2(3)           <---------ANAC58    ----------->GT1  --------->AHL20(2)
 
caaggacacgaatgaataaaacttaaatcattaacaagaaaacagatagcgtaaagaatttatttgatcagttattattgacctataaaatttgatttga  6778900
                       ------------>CBF                               ------>NtERF2
              <---------ANAC58                                        --------->LBD16
              ----------->GT1                                        ------->GAMYB
              <---------ANAC55(2)                                   <---------MYB55(2)
              <---------ANAC46                                      --------->MYB46(3)
          <---------HSFC1(2)                                     <---------ALFIN1
         ----------->ARR10         <---------ICU4          <---------ANAC58   ----------->TBP
         --------->MYB52(2)<---------ATHB12             <----------DOF2       *TSS    --------->TOE2(2)
         --------->MYB111(1) <-----------GT1           <---------ANAC58 <---------ANAC46
        <--------P  --------->RVE1(1)                  <---------ANAC58<------NtERF2  --------->TOE1(2)
---------TOE2(3)    --------->CCA1(1)        <---------YAB1<---------ANAC58 ----------->TBP    -----
------WOX13(1)<---------ANAC58     --------->YAB1   ------>ZmHOX2a(1)--------->ANAC46----------->RAV1(2)
 
tttatgtaagggtagtttcgtaaatatccaataaaccatcatcatcttcttattcctggctttcgtctccacccgccgtatatataaaacctgagacgaa  6779000
                                                                                     <---------ANAC58
                                                                                   ------>NtERF2
                                       <---------ZAT14                       <---------At4g35610
                  --------->ANAC58     --------->ZAT14                       --------->ZAT2
                  --------->ANAC58    ----------->RAV1(1)                    <---------ZAT2  -------
               --------->WRKY18(1)   --------->ANAC46                        --------->At4g35610----
-->TEIL<---------KAN4(2)           --------->ANAC46                        <--------P<---------ANAC58
 
gcttgatgagaacaatcgggcaaggccttatagagattacacaacacagatagattacacactgagaaacagagaatggtagctgaggccttgcccaaat  6779100
                                   <-----------ARR10
                                  --------->ZAT2
                                  --------->At4g35610
                                  <---------At4g35610
                                  <---------ZAT2                                                   <
                                <---------ALFIN1                                                   -
                               --------->LBD16                   <------MYB83                     --
                              --------->ANAC46               --------->ATHB12                 ------
                              --------->ANAC58               <---------MYB46(3)           ----------
    <---------At4g35610       --------->ANAC58              <---------YAB1               <----------
    --------->At4g35610      <---------LBD16             ============================HOX2a_HOX2a<---
 ---------->DOF2             ------->GAMYB               ------>ZmHOX2a(1)    <------ZmHOX2a(2)<----
----------->HVH21          ------>MYB83          <-----------HVH21   <----------DOF2    --------->LBD16
--->DOF2<---------ALFIN1   ------>MYB46(1)    <---------DOF5.7(2)<------MYB46(1)       --------->LBD16
----->ZAT18                -------->P       --------->DOF5.7(2)<---------WOX13(1)     <---------LBD16
 
gccctgaagctccactcgtacttggactccaacccgcagctcttatcgataacgtcgctcctgttgattggtctttactcgatcaaattcccggtgatcg  6779200
 <------NtERF2
 --------->ATERF1(1)
--------->ABI4(2)
<---------MYB46(3)
<---------ATERF1(1)
------>NtERF2  --------->ANAC58
---------DEAR3(1)
-------->ALFIN1--------->ANAC58
------->At5g28300                             <---------ANAC58                             ---------
>ZmHOX2a(2)  <---------MYB52(1)               <---------ANAC58                         --------->ANAC58
->HVH21     <---------RAP2.6(3)               <---------ANAC46                 --------->ALFIN1
-HVH21      <---------SPL7               --------->MYB52(2)                  <-----------RAV1(1)   <
------DEAR3(1)--------->SPL7           <---------MYB52(1)            <XXXXXXXXXXXXXXXXXXXXXMIR833-3P
-----LBD16 <---------ANAC46          <---------ZAT6            --------->ARR11(3)      --------->ANAC58
 
cggtggctccattgccgtaagccattcttctctgtttttagcgttatttgagtgttttcagtgaattatctcgttttttgatgtgggtttaagcaaaagt  6779300
                                                           <---------YAB1
                                                      <----------DOF2
                                                     ===============================HOX2a_HOX2a
                                                     ------>ZmHOX2a(2)
                                                    <---------RVE1(1)
                                                    ================================HOX2a_HOX2a
                                                    <------ZmHOX2a(2)
                                                   --------->ARR11(3)
                                                   <---------AGP1
                                                   <-----------ARR10                        <-------PIF4
                                                   <---------ARR11(1)                       ------->PIF5
                                                   --------->ARR14(2)                       ------->PIF4
                                                   <---------ARR14(2)                       <-------PIF5
                                                   <---------ARR11(3)                       <-------MYC4
                                                  <------NtERF2                             ------->MYC2
                         <---------ARR14(2)       <---------ARR14(1)                        <-------MYC2
                   <---------ARR14(2)           <---------ANAC58                            <-------MYC3
                   --------->ARR14(2)           <---------ANAC46                            ------->MYC3
------->TEIL       --------->GLK1(2)            <---------ANAC58             <------ZmHOX2a(1)    --
->DOF2 <----------DOF2   --------->ARR14(2)    <---------LBD16           ---------->DOF2<---------ZAT18
---------CCA1(2)  <---------GLK1(2)<---------YAB1 <---------CCA1(2)   <-------TEIL   ---------->DOF2
 
ttgaatcttcctttggtatcggaatctggatttgaattgttattgtacttggcggatcttttgtgattctaggtgcaaaaggatgagttagagcacatgc  6779400
                                                                                              ------
                                                                                             -------
                                                                                             <------
                                                                                           <--------
                                                                                           <--------
                                                                                           <--------
                                                                                          <---------DEAR3(1)
                                                                                          --------->MYB52(2)
                                                                                         <-------TEIL
                                                                                      <------MYB83
                                                                                      <------MYB46(1)
                                                                                      <---------ANAC58
                                                                                      <---------ANAC58
                                                                                     <---------MYB46(3)
                                                                                    <---------ANAC46
                                                                                 <---------ZAT6
                                                                                 --------->ALFIN1
                                  <---------TOE2(3)     ----------->HVH21        <-----------RAV1(1)
                                 ---------->DOF2      --------->ALFIN1         <---------ANAC46
            ------->TEIL        --------->AHL20(2)<------ZmHOX2a(1)            <---------ANAC58
  <---------ARR11(3)   --------->ALFIN1     <---------ANAC46                   <---------ANAC58   --
  --------->ARR11(3) <-----------RAV1(1)    <---------ANAC58               <---------ANAC58<------MYB83
-------->DOF2        --------->ALFIN1       <---------ANAC58               <---------ANAC58<------MYB46(1)
 
taaaagagcttgatgcacatatcagtgtggctccattaaagaagatggctggaggaagtgtgaccaatacagttcgaggcttgagtgttgggttcggtgt  6779500
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AGI:  At1g19600.1   
Description:  pfkB-type carbohydrate kinase family protein. similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT4G27600.1); similar to unknown [Populus trichocarpa] (GB:ABK95067.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611)
Range:  from: 6778979    to: 6781164    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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