Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ATHB12                                -------->ATHB1                                <---------ICU4          <---------ZAT2       <---------YAB1                                                   -----          --------->ZAT2       --------->ICU4                                                <-------          ----------->RAV1(2)--------->YAB1                                                 <--------         ------->TEIL       ------------>ATHB5            <---------ARR14(2)                <--------      --------->ANAC58  <---------ATERF1(1)               --------->ARR14(2)                <--------      --------->ANAC58  --------->At4g35610              <------ZmHOX2a(1)              <---------ANAC58      --------->ANAC46  <------NtERF2              --------->ANAC58                     <---------ANAC58     ------->TEIL       <---------At4g35610        --------->ANAC58        <---------ANAC55(2)<------  <---------ATHB12     --------->RAP2.6(2)        ------->TEIL    <---------LBD16      --------->STY1(2) -------->WOX13(1)     <---------ATERF1(1)     <---------YAB1--------->ANAC58          <---------STY1(2) ----ZmHOX2a(2)      ------>NtERF2        <---------At4g35610--------->ANAC58     --------->GLK1(2)   atcaatgaacgcacctgtgcctcggccgctaccatcattgatggagcttatgaacgctaggaaacgctctcggaatcacttgagtttctagcttgcggtt  6570800                                                       <---------ZAT14                                                       --------->ZAT14 ------>HVH21                                         --------->ALFIN1 --MYB46(3)           --------->ZAT14            <<<<<<<<<<<<<<<<<LFY -ANAC58            <---------YAB1            <---------YAB1 -ANAC46          <---------ICU4             --------->AHL20(2) -ANAC58       <---------bZIP60(1)      --------->AHL20(2)                 --------->ICU4          <- -GAMYB        --------->bZIP60(1)      <---------AHL20(2)    <---------ARR14(2)        --------->ANAC46   gacatcttagcctgatcacatcattacagtctcaatcccttataaatttttatacagtggagagaatacagtttgtaatgttttttatacacagaaattg  6570900                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                          <-------TEIL                                                          ----------->GT1                                                         <--------P                                --------->ARR11(3)     ----------->GT1         --------->AHL20(2)                  --------->ARR11(3)                  <---------TOE2(3) ------->TEIL    <---------AHL20(2)          <---------ARR11(3)    --------->DAG2   <---------ALFIN1  ------->MYC3 ------TEIL   ---------->DOF2--------->AHL20(2)<---------YAB1 --------->AHL20(2)         <-------MYC3   atacatttttttgaataaaagaaattgttgataaaatctatttcagtttttgataaaaggttgataaaatcttgcacctctataaataccacgttgattc  6571000                --------->At4g35610               ----------->RAV1(1)              <------NtERF2                                                                 <--------             --------->LBD16                                                                ---------             <---------At4g35610     <---------DAG2                            <---------YAB1      --             --------->At4g35610   ------>MYB46(1)                          <---------MYB52(1)   <---             ------>NtERF2         -------->P                        <---------ATHB51       <--------      --------->ZAT6               ------>MYB83                      <---------AHL20(2)   --------->ARR14(2)    --------->YAB1       ---------->DOF2                       --------->TOE1(3)          <---------ARR14(2)   <---------ATHB12 --------->AHL20(2)<----------DOF2          --------->TOE2(3)     <-----------HVH21   ttccaataacactgccgcagcataaaataaagaaccctaccttttttttttgtttttgctaagaaccctaaattattcgttatgagaggtcggatatatt  6571100                                              <---------WRKY38(1)                                             <---------ATHB12                             <---------HSFC1(2)                                            --------->ANAC58                              <---------HSFB2a(1)                                            --------->ANAC58                              --------->HSFB2a(1)                                         ------------>CBF                                 --------->KAN4(1)                                   <---------At4g35610                                    --------->HSFC1(2)                                   --------->At4g35610------->MYC2                        <---------KAN4(1)                                   --------->ZAT2     <-------MYC2                       <---------KAN4(2) -AHL20(1)                         <---------ZAT2--------->ANAC58                        ------->TEIL >ARR11(3)                      <---------At4g35610   ------->MYC3                   --------->SPL7 ------->ANAC46               <-----------RAV1(2)--------->ANAC58                <---------------AtSPL3 --------GT1          ------>ZmHOX2a(1)<------NtERF2  <-------MYC3         *TSS------->TEIL     ----- -ARR11(3)         --------->ICU4 --------->GLK1(2) ------->TEIL         <---------MYB46(3)--------->KAN4(2)   ttcgccatgaaatcgaccgtaatcctgaagtctcagaagctggcacaatcaacgcatgtgtaaccatggtcacgatggatgaacctgtacgaacattccc  6571200                    --------->TGA2(2)                   <-----------HVH21                   <-----------TGA1                  --------->ANAC55(2)                  --------->TGA2(1)                  <---------TGA2(1)                  --------->bZIP60(1)          <---------LBD16       <---------ANAC58       <---------ANAC58       <---------ANAC46  <---------ANAC55(1)                                            <----------DOF2  <---------bZIP60(2)                                           ------>ZmHOX2a(2)  --------->ANAC55(2)              <------ZmHOX2a(1)          --------->ARR11(3)  <---------ANAC58<---------bZIP60(1)                         <---------ARR11(3) <---------GLK1(1)  <---------O2   <-----------STF1<---------TOE2(3)           --------->YAB1    <---------HSFB2a(1)  <---------ANAC58<---------ANAC55(2)                      <---------TOE2(3)   --------->HSFB2a(1)---  <---------ANAC46--------->ANAC46 ====================================HOX2a_HOX2a                <--  <---------ANAC55(2)         <---------REM1(1)           --------->YAB1 ---------->DOF2 <---------HSFB2a(2) ---->LBD16 --------->LBD16 --------->At4g35610      <---------ARR11(3)<---------YAB1    --------->HSFB2a(2)   gattacgtggctcgcggattacgtcatggaagatgaaggatttagtagtagagaagacattaatgatcttttgatgaaagaaggtttccctctcgaaccc  6571300                         <------NtERF2                     <---------YAB1                         --------->LBD16               <-------MYC3                        --------->ANAC46               ------->MYC3                        --------->ANAC58              <---------TGA1a             -------->ZAP1                            --------->ANAC46 ---------->TaMYB80           <---------WRKY18(1)     --------->ATHB12   <---------O2     <---------ARR14(2)          <-          --------->WRKY38(1)     <---------YAB1      --------->O2     <---------KAN4(2)           <-          --------->WRKY12 =====================================bZIP_DOF                           <-       <-----------RAV1(1) ---------->DOF2            --------->ANAC55(2)                          --      <---------TOE2(3) --------->ANAC58              <---------ANAC55(2)--------->KAN4(2)     <----- ------>ARR14(2)       <---------LBD16                --------->TGA1a  --------->ARR14(2)      <----- -------ARR14(2)      <-----------------AGL1       ------>ZmHOX2a(1)  <---------GLK1(2)     <--------   gatttgtttatgttgaccgaaattgcccgcaaaggtatcattgaagtgacttcctcacgtgattatagcccagaatatgctctgtttctgaatttgactt  6571400                                                                                                 ----                                                                                             --------                                                                                           --------->At4g35610                                                                                           <---------At4g35610                                                   --------------->AtSPL8                  <---------ZAT2                                         ------>NtERF2                                     --------->ZAT2                                     --------->ANAC46         --------->ATHB51        --------->ANAC58 --------ANAC58                      --------->TGA2(1)        -------->ATHB1          --------->ANAC58 --------ANAC58                      <---------TGA2(1)        --------->YAB1       --------->LBD16 --------ANAC46                      <---------bZIP60(1)     <---------YAB1       --------->ANAC46 ------->ANAC55(2)                   --------->bZIP60(1)--------->ANAC46          --------->ANAC58 <- -----DOF2                          ----------->STF1  <-----------GT1             --------->ANAC58<-- ----DAG2                         ----------->TGA1--------->AHL20(2)             <---------LBD16 <--- ---GT1       <----------DOF2   <------ZmHOX2a(1) <---------AHL20(2)      <----------DOF2<---------ZAT18   ttcgtgatggtatttcctttgatgagattgtagaggatgacgacaccaatatttatataccctattattgtataccctttagacccgcaagcgagctcgc  6571500         ------>NtERF2        --------->WRKY12        --------->WRKY38(1)        --------->WRKY45      <---------At4g35610      --------->At4g35610     <---------DEAR3(1)   <-----------HVH21  <---------At4g35610  --------->At4g35610  --------->O2  <---------O2 >>>>>>>GRF7 --------->MYB59   --------->AHL20(1)                   --------->ZAT18 ------->HVH21     --------->ARR11(3)                   <-------TEIL                        --------- ->ZAT18----------->HVH21                     ----------->GT1                              --------->ANAC58 --------MYB52(1)  <---------ARR11(3)         <------MYB46(1)                         <------ZmHOX2a(1) ---------HVH21   --------->AHL20(2)          <------MYB83  --------->ATHB51   ---------->DOF2  ----- -------DOF2    --------->AHL20(2)           <---------MYB46(3)           ----------->GT1  --------->ANAC58   tgtcaggtcgctgaccaaaaatatatactacaagactagctctatagttggtgataagtgcataatttgtttggaagagtttaaagaaggagcaagaatt  6571600                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              <------          ------->MYC3                                         <---------DAG2               <--------    <-----------GT1                                            ======================================  <----------DOF2                                              <----------DOF2              <--------  <---------DAG2                                <---------ANAC58                      <---------GLK1(1) >ICU4    <-------MYC3                   --------->ETT(2) <-----------HVH21 <-----------HVH21 ------- ------>GT1              <---------TOE2(3)      <---------ANAC58           <-----------RAV1(1)<------   gtgactttaccatgtggacatgagtttgacgataagtgtattgtagactggtttgcgaccagtcacttttgtccattgtgtcgcttcgagttccccacgt  6571700  Previous    Next  AGI:  At1g19025.1    Description:  DNA cross-link repair protein-related. similar to DNA cross-link repair protein-related [Arabidopsis thaliana] (TAIR:AT1G27410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46414.1); contains InterPro domain DNA repair metallo-beta-lactamase (InterPro:IPR011084) Range:  from: 6568844    to: 6570930    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g19030.1    Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13655.1); similar to putative AP endonuclease/reverse transcriptase [Brassica napus] (GB:AAM82604.1); contains domain NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED (PTHR19446:SF34); contains domain REVERSE TRANSCRIPTASES (PTHR19446) Range:  from: 6571175    to: 6572928    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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