Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                        <------NtERF2                                         --------->ARR11(3)                          <------NtERF2                                     ------>ZmHOX2a(1)                               <---------LBD16                                    --------->TOE2(3)                               ------>NtERF2                                 --------->ARR14(2)                                 --------->LBD16                                 --------->GLK1(2)                                 --------->ANAC46 <                          --------->WOX13(1)                                      <---------MYB55(2)-                        <---------ATHB12 <---------ARR11(3)                       --------->MYB46(3)-                 -------->HAHB4  <---------ARR14(2)        ---------->DOF2      ------>ZmHOX2a(1)  <-                 --------->YAB1 <---------GLK1(2)     --------->YAB1        <---------ARR14(2)  ----- ---TEIL      --------->YAB1 --------->YAB1         --------->GLK1(2)       --------->ARR14(2)  ----- --->CCA1(2) <---------YAB1 <---------ATHB12    --------->YAB1   <---------------AtSPL8--------->LBD16   caaattagagacattctaataatacaatcaatcagaatcctaagctcttatcagaatcagaaaaagagtagtacctcgtttcctcccgccggaagaagac  6562400                                    <---------At4g35610                                    <------NtERF2                                <-----------HVH21                                <-----------TGA1                               ------->GAMYB                                                  -------                               --------->ANAC46                                              --------                              --------->MYB46(3)                                             <------NtERF2                            <---------ARR14(2)                                               --------                            --------->MYB52(1)                                              <--------                         <---------ANAC58                                                   <--------                         --------->ANAC55(2)                                                <--------                         <---------ANAC58                                                  <---------DEAR3(1)                         <---------ANAC55(2)    <-----------HVH21                         <---------ABI4(1)                        <------NtERF2        <---------At5g28300                         --------->LBD16                      <---------DEAR3(1)   --------->MYB46(3)                            ------>NtERF2           <-----------HVH21--------->ARR14(2) --------->DEAR3(1)                      <---------LBD16 ---ID1    <-----------TGA1----------->HVH21--------->YAB1                           <---------ARR14(2) ---------ARR14(2)   --------->ATERF1(1) --------->WOX13(1)        <---------CCA1(2) --------->ARR14(2) -------->GLK1(2)    <------NtERF2<---------WRKY12           <---------ANAC58       --------->At4g35610 -------->ARR14(2) <---------ANAC46 --------->At4g35610      <---------ANAC58       <---------At4g35610 --------GLK1(1)   <---------DEAR3(1) ----------->RAV1(1) <---------MYB52(1)        --------->ZAT2 -- ---->ANAC58      <---------LBD16<---------MYB52(1)  --------->ARR14(2)             <---------ZAT2 <- ---->ANAC58 --------->ATHB12 <------------AtMYB77   <---------ARR14(2)  <-----------GT1<---------DEAR3(1)   gaaatctggacagcgtcattggcggaggcgtaaccgtcagcgacaatcaccgtcgcatccgtttcgttcttatcttcaccatctccagctccggcggtga  6562500         --------->GLK1(1)         <---------GLK1(1)         <------ZmHOX2a(2)         ===============HOX2a_HOX2a        <---------ARR11(3)        --------->ARR11(3)                                                          --------->ANAC58 -->WRKY38(1)                                                                       --------->ANAC46 ->ATERF1(1)                                                                        --------->ANAC58 ->At5g28300                                                                      ------->GAMYB -MYB46(3)==============HOX2a_HOX2a                                              --------->MYB46(3) -DEAR3(2)------>ZmHOX2a(2)  <----------DOF2                            <---------At4g35610 -ATERF1(1)         --------->LBD16    --------->YAB1            <----------DOF2-------->P ------->ARR11(3) <---------LBD16--------->YAB1               <---------ALFIN1 --------->WOX13(1) --------ARR11(3)------>ZmHOX2a(1)  <---------ICU4          <---------ALFIN1 <------ZmHOX2a(2)   ctatcttagggatctcatcctccggagaagacttttcataatcagagagattgttcaaactcacacactttctcatcggatcaaccacgactctaactcc  6562600                                 --------->At4g35610                                 --------->LBD16                                 <---------At4g35610                                 <------NtERF2                                 --------->ZAT14                                 ------>NtERF2                                --------->DEAR3(1)                                --------->RAP2.3(2)                    --------->ICU4                               <---------LBD16                     <------NtERF2                           --------->SPL7                          ------>NtERF2                           ---------->DOF2                        --------->RAP2.6(2)                        --------->ANAC55(2)                      --------->DEAR3(1)                        <---------ANAC55(2)                      <---------RAP2.6(2)                        --------->ANAC46                         <---------DEAR3(1)                       <---------LBD16                          --------->ATERF1(1)                   <----------DOF2<------NtERF2                <---------RAP2.3(1)             <---------CCA1(2) --------->RAP2.3(1)          --------->MYB52(1)         <-----------GT1         ------>ZmHOX2a(2)----------->HVH21      ------>NtERF2 ------->GAMYB       <----------DOF2       --------->ARR11(3)<-----------HVH21      --------->DEAR3(1)------>NtERF2    <---------DAG2   <       <---------ARR11(3)--------->LBD16<---------LBD16   <---------MYB52(2)--------->AHL20(2) <-----   gaacaacatgatctcatctctctttcccgtaacgccgcagtctccggtctccgacgaactactaacggcggccataaataaaacactttttccgattttg  6562700                                                                            <---------At4g35610                                                                        ------>ZmHOX2a(2)                                                    <------ZmHOX2a(1)  <---------At4g35610                                               <---------GLK1(2)      <---------AGP1                                           --------->SPL7             <---------ARR11(3)            -          <----------DOF2                 --------->SPL1(1)           <-----------ARR10         =====    <---------ANAC58                     <---------SPL7               --------->ARR14(2)        <----    <---------ANAC58 <-----------GT1     <---------SPL1(2)            <---------ARR14(2)      ------- ----------DOF2     <-----------GT1    --------------->AtSPL3--------->ALFIN1*TSS         <---------ANAC58 ------GT1<---------DAG2          --------->YAB1    ===========================HOX2a_HOX2a<---------ANAC58   ccctttgcgtcgcttttggtttttaccctttcgaaataagaaccgtacagattaggagacgaggtgtgagtggatctgagctacttcttctgtcttgtct  6562800                            <---------ANAC55(2)                            --------->ANAC55(2)                            <---------ANAC58                            <---------ANAC58                   <-------MYC3                   <-------PIF5                   ------->PIF5                   <-------MYC2                   ------->MYC3                   ------->MYC2                   <-------MYC4                                          --------->YAB1                   ------->MYC4                                      <---------AHL20(2)                  <<<<<<<<<<HY5                                 <-------MYC2                  --------->TGA1a                               <-------MYC3                  <---------O2                                  ------->MYC3                  ==========================MYC_MYB             ------->MYC4                  <---------bZIP60(2)                           ------->MYC2                  >>>>>>>>>>HY5                                <--------ABF1                  <---------TGA1a               <-----------GT1<---------O2                  --------->bZIP60(2)   <---------ANAC58       --------->O2                  --------->PIF3(3)     <---------ANAC46       <---------TGA1a             --------->ANAC58           <---------ANAC58       --------->TGA1a --------->YAB1   <---------PIF3(3)   <---------ANAC46         <---------ANAC55(2) ---------->TBP   --------->O2       <---------MYB52(1)        --------->ANAC55(2)                --- ===========================bZIP_DOF<-------GAMYB <---------YAB1<-------MYC4--------->ATHB12  <------ ------DOF2  --------->ANAC46       =====================================MYC_MYB     <-----------HVH21 --->ID1     --------->ANAC58      <-----------RAV1(1)    ----------->HVH21<---------YAB1     -------   ttataaaaactcgataagccacgtggcattacttactctgttgtgtgttattacgataacatgacacgtgtttatttatgatttgttcgtcactcgtttc  6562900         <---------ANAC58         <---------ANAC58     <---------ANAC58     <---------ANAC58                                      ----------->GT1     <---------At4g35610    <---------ICU4            --------->AHL20(2)           --------->YAB1  ----------->HVH21       <-----------GT1             <---------AHL20(2)          <---------YAB1 <-----------HVH21       <-----------GT1          --------->AHL20(2)        <---------ARR11(3) --->ZmHOX2a(1)          --------->YAB1           <---------AHL20(2)        --------->ARR11(3) ---ARR14(2) <---------CCA1(2)                --------->ICU4         <----------DOF2 -->ARR14(2) ---------->ID1<---------YAB1     --------->AHL20(2)  <---------AHL20(2)  <---------ICU4   ctctgtgacctgcttgtctctctatatttatcatttcttccatttggatttattaattaatgagttattttctttggatatattctgataatgtctctct  6563000                         --------->AHL20(2)                                             --------->AHL20(2)               ---------->ID1                                                    --------->ANAC46         <---------YAB1  <---------AHL20(2)                                      --------->ANAC58        <---------AHL20(1)<---------AHL20(2)                                     <---------ANAC55(2)       <---------ICU4<---------AHL20(2)           ---------->DOF2                --------->ANAC55(2)      <---------YAB1 <---------YAB1            --------->AtLEC2                  --------->ANAC55(1)      --------->ICU4 --------->AHL20(2)        --------->ANAC58                  ----------->GT1    <---------ICU4  <---------AHL20(2)         --------->ANAC46                  --------->ANAC58    --------->YAB1  --------->AHL20(2)         --------->ANAC58          ------>ZmHOX2a(1)   --------   ctctattcattatttttgtcattttaattaaatgtgtttttttttgttcaagcaaagtgaatgtgtctcgacgtccttctctcacgtaaaaaaaatggtt  6563100                                                         <---------TOE2(3)                                                    <------MYB83                    --------->ATHB12                <------MYB46(1)        --------->AtLEC2                   <---------YAB1              --------->DAG2       <---------ANAC58                  <---------TOE2(3)           ---------->DOF2       <---------ANAC46  <---------ZAT6 --------->YAB1       ----------->GT1  ---------->DOF2 <-----------HVH21         <--- --->GT1    <---------YAB1          ----------->GT1--------->MYB59  <---------ANAC58        ---------   tctagtgtgattttcttattgatgatttgaatatagaaatgagaaaaaaaaagttggtaaaggaagtatggtgtgtcatgcgcatgaagatgaaatgtga  6563200                                                                                       --------->At4g35610                                                                                       <---------At4g35610                     <-----------GT1                                                 <---------WRKY45                <---------ICU4                                                --------->GLK1(2)                <--------HAHB4                                                <---------ARR14(2)                --------->ATHB51                                              ------->TEIL               <---------YAB1                                                 <-----------ARR10         <---------MYB46(3)              <---------YAB1             <---------ZAT6   <---------WRKY12   <---------AtLEC2--------->AHL20(2)  --------->YAB1          --------->TOE2(3)     <---------WRKY38(1) ------YAB1    --------->ICU4     ----------->GT1             <---------ZAT6  --------->ARR14(2)  <-- -->GT1 <--------P <---------AHL20(2) <---------YAB1--------->YAB1  ----------->GT1 --------->WRKY18(1)   tttttgaatggtagttcataattaaactgtataagatggtattataagtgtgttttataatgtaatgttagtgttaaacgaatctggtcaacttacttag  6563300  Previous    Next  AGI:  At1g19000.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G74840.1); similar to Putative DNA binding protein, identical [Lycopersicon esculentum] (GB:AAX95766.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 6560786    to: 6562777    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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