Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------YAB1                        --------->ARR14(2)  ----------->GT1                      --------->ANAC58                  --------->GLK1(2)<---------At4g35610           <---------ANAC46--------->ANAC58                 <---------GLK1(2)------->TEIL                <--------P         --------->ANAC46 -------->ARR14(2)--------->ARR14(2)    ------>ZmHOX2a(1) <---------ANAC46     ------>ZmHOX2a(1) ---------ARR14(2)<---------ARR14(2)  ----------->RAV1(2)<---------LBD16   <---------ARR14(2) ---bZIP60(1) <------ZmHOX2a(1)<---------REM1(1)      <-----------HVH21    --------->ARR14(2)  ------   cgaatccattgtataaggagaatctgtattctcatgtagctcctgatagtaaaacgggtctcgggttactggtaccagttcctaagcaagttgaagtcaa  6362800                                                                                     --------->YAB1                                                                                    --------->MYB46(3)                                                                                   ------>MYB46(1)                                                                                   ------>MYB83                                                                                   -------->P                                                                           --------->YAB1   ---------                                                                           <---------AtLEC2 <--------                                            <----------DOF2        <---------ARR14(2)--------->TOE1(3)                                           <---------DAG2          <---------GLK1(2)<---------ATHB12                                    <---------WOX13(1)             --------->ARR14(2)--------->TOE2(3)        <---------DAG2            --------->ATHB12              <---------ANAC46 --------->AtMYB61        <----------DOF2          <---------YAB1  <---------AtLEC2 <------NtERF2  --------->MYB46(3) ---->DOF2   <-------GAMYB     <---------At4g35610             <---------LBD16<---------WRKY18(1)   agcttgaagacttttcgttgatactctctgtttagatgattgatgccttttgcaagtctagcattggcggattcttagcatgaccaaccataaacatctt  6362900                                                                                 <------------CBF                           <---------AHL20(2)                                  <---------AHL20(2)                           ---------->DOF2                                     <---------YAB1         <------------CBF<---------YAB1          ------------>CBF             --------->AHL20(1)  <---------ANAC46      --------->TOE2(3)<---------YAB1                       --------->AHL20(2)   <- ---------->ID1        <--------HAHB4    --------->ICU4                  ------------>CBF  <---------ARR11(3) >ARR11(3)             --------->YAB1   <---------TOE2(3)            <---------YAB1        --------->ARR11(3) -ARR11(3)            <---------YAB1 --------->ARR11(3)        <---------ICU4 <---------AHL20(1)<----   cttggcgcataaattgtagtttttatcattaaaacgatagataatgtttgtagcaatatggaacattatttcttattcaatataattgttcaaggtctct  6363000                                               --------->ALFIN1                                             <---------ANAC46                                             <---------ANAC58                      --------->ARR11(3)        ------>ZmHOX2a(2)                    <---------ANAC58                      <---------ARR11(3)       <---------At4g35610              --------->MYB52(1)                        --------->RVE1(1) - --------ARR11(3)                    --------->TOE2(3)           <---------ATHB12 --------->CCA1(1) - -----HSFB2a(2)                      --------->YAB1------------>CBF    <---------YAB1               -   agatgtttgatctgcttattcaactccatactgaatcaaacttaatggcgtgaggcaatgtaatcaaatcactctcatagaaaaaaatctcagagagaaa  6363100                                                       <---------CCA1(2)     <---------GLK1(2)                              <---------At4g35610     <---------ARR14(2)                        <---------TOE2(3)     --------->ARR11(3)                        --------->ANAC58  <---------ANAC58     --------->ARR14(2)            <---------ANAC46 <---------HSFC1(2)                    --------->ANAC58 ----->MYB83                 <---------GLK1(2) --------->ANAC58  <---------ANAC58         --------->ANAC58 -------->MYB52(1)  --------->YAB1<---------LBD16<------ZmHOX2a(1)          <---------ANAC58 ----->MYB46(1)    ----------->HVH21--------->LBD16 --------->HSFC1(2)      <---------ANAC58   ccaaacagattttgaatttctatgacaactagcttctccgtgtttggataaggaagcttatcttatggcttctgttttgcttccattgccacaagtattt  6363200                                                ------>NtERF2                                               --------->RAP2.3(3)                                               <---------ANAC46                                               --------->DEAR3(1)                                               --------->RAP2.3(2)                                              --------->ATERF1(1)                                              <------NtERF2                                              --------->DEAR4(2)                              --------->WRKY18(1) <---------ETT(2)                     ----------->GT1          --------->ORA47(2)                     --------->RAP2.3(2)      --------->RAP2.3(1)                     --------->RAP2.6(2)     ------>NtERF2                     <---------ANAC46        <---------ATERF1(1)                    <------NtERF2           --------->ANAC46                    <-----------------------TaNAC69(2)                                       <-------                  --------->ARR14(2)       ------>NtERF2                                     --------                 --------->ATERF1(1)       --------->LBD16                                   <-------                 <------ZmHOX2a(1)        --------->ANAC46                                   --------               <---------TOE1(2)          <---------ATERF1(1)                               <--------              <-----------RAV1(2)   <----------DOF2                                       --------->WOX13(1)         <---------ICU4 ---------->DOF2   <---------ALFIN1                         --------->AtMYB61        <---------YAB1<---------RAP2.6(3)<---------LBD16                          --------->MYB46(3)   gttttgtttgattatcgcaggagccgtaaagagtcaagctttccccgcgccgtctacaattccaattccatttcttctaattcaaccaatgccaatcatt  6363300                                                                                                   <-                                                                                                <----                                                                                                <----      --------->LBD16                                                                       ---------    <---------LBD16      <---------ARR14(2)                                         <---------ZAT2 -- -HAHB4             <---------ANAC46           ------>ZmHOX2a(1)            ----------->TGA1<-------- ->ATHB12--------->GLK1(1)                --------->ANAC58                  ----------->HVH21  <----- --ICU4  <---------GLK1(1)       --------->ARR11(3)                     <------NtERF2     --------->SPL7 ->YAB1 --------->ARR14(2)   --------->LBD16   <----------DOF2        <---------DEAR3(1)<-----------HVH21 -ATHB12<---------ARR14(2) <---------LBD16--------->ANAC58           <---------MYB52(1) <---------SPL7   tccttcgccggatttctaacttctgtgaaaccggagacctcgacaagtcctttcgaactgtccaagaattcgttggcgatgacgagagctcgtccgatgc  6363400                                                                                    <---------At4g35610                                                                                    --------->At4g35610                                                                                    ----------->RAV1(2)                                                                                    --------->ZAT2                                                                                    <---------ZAT2                                                                                  --------->MYB46(3)                                                                                  <-----------RAV1(2)                                                                              --------->MYB46(3)                                                                             <------ZmHOX2a(2) --------ARR14(2)                         --------->HSFB2a(2)                --------->CCA1(2) -----ANAC58     --------->ARR11(3)       <---------HSFB2a(2)               --------->ARR11(3)    <-- -----ANAC58 ---------->DOF2           --------->GLK1(2)                    <---------ARR11(3)    --- >At4g35610<---------HSFB2a(2)       <---------HSFC1(2)                     --------->AGP1        <-- ------->ARR14(2)<---------ARR11(3)  --------->HSFC1(2)                     <---------ARR14(2)    --- -At4g35610--------->HSFB2a(2)      --------->ANAC58    --------->ARR11(3)  --------->ARR14(2)    --- --TEIL   <---------TOE1(1)         --------->ANAC58---------->DOF2     ---------->DOF2     <--------   gtttcttcttgtccgagaagctcttgggcttctcttacaagcttctgggaagagaaaagacattgaaatgggaagaaagatccaccagctggtttctggg  6363500           <------ZmHOX2a(1)         <---------TOE1(3)         --------->ANAC55(2)--------->ZAT14              =====================RAV    --------->LBD16 <---------ANAC58              --------->ANAC46  <---------LBD16   <---------ANAC58              --------->ANAC58                                  - -------ETT(2) --------->YAB1                     --------->ANAC58                                 <- -------->HVH21<---------ICU4            --------->YAB1  --------->ALFIN1<---------GLK1(2)         <- -------WRKY38(1) <---------TGA2(2)      <-----------GT1 <-----------RAV1(1)     <---------MYB52(1)<- ------>WRKY38(1)----------->TGA1     --------->YAB1   <---------ANAC46<---------YAB1             <-- ------>ETT(2)--------->ICU4<---------ZAT14      ------->TEIL       ------>ZmHOX2a(1)          <----- -LBD16  <---------TOE2(3)--------------->AtSPL8 --------->ZAT18  ----------->RAV1(2)          <-----   tcgacccggttaaggaatgatgacgttctctgtactcgtattatcaccatgtacgctatgtgtggctctcctgatgattctcggtttgtgtttgatgcct  6363600         --------->GLK1(2)        <---------GLK1(2) -------->LBD16 --------ANAC58                                   --------->CCA1(2) --------ANAC46                                --------->ANAC58 --------ANAC58                                --------->ANAC58                                    -- -------LBD16                       --------->At4g35610  <---------DAG2                     --------- ----ANAC58                         <---------At4g35610  <----------DOF2                    <-------- ----ANAC58                  <-------GAMYB     --------->ANAC46               <---------ANAC46------>ZmHOX2a(2)   tgcggagtaagaatctcttccagtggaatgctgttatcagctcttactcaagaaacgagctttacgatgaagtattagagacgtttatcgagatgatctc  6363700  Previous    Next  AGI:  At1g18480.1    Description:  calcineurin-like phosphoesterase family protein. similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G07010.1); similar to Putative [Brassica oleracea] (GB:AAW81738.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) Range:  from: 6361622    to: 6363000    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g18485.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G57430.1); similar to Putative Putative Pentatricopeptide (PPR) repeat-containing protein [Brassica oleracea] (GB:AAW81739.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67948.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 6363165    to: 6366228    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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