Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ZAT2                                    --------->At4g35610                                    --------->ZAT2                                    <---------At4g35610                                    ----------->RAV1(2)                                  <-----------RAV1(2)                               ------>ZmHOX2a(2)                              <---------GLK1(1)                              --------->GLK1(1)                             --------->ARR14(2)                             <---------ARR11(3)     --------->ANAC58        <---------AGP1     --------->ANAC58        --------->ARR11(3)                                                     -    ------->TEIL             <---------ARR14(2)                                                     - <---------MYB52(2)       --------->ALFIN1                                                          - --------DOF5.7(2)      --------->ALFIN1                                         --------->TOE1(3)  - ---->LBD16           <---------ANAC58                        <---------ALFIN1   --------->TOE2(3)--- --->ANAC55(2)        <---------ANAC46                       --------->MYB46(3) ----------->RAV1(2)<- ----ANAC55(2)        <---------ANAC58               <---------CCA1(2)         -------->P<-----------GT1 ---LBD16  --------->ATHB51 <---------CCA1(2)--------->At4g35610               ------->TEIL   <------   taaacgaaccccattatcgactgtgcgtgtggatctccagctgaagaagcagcctctatctcatccactgcttcttccatcaacctgaaatttccctcac  6281700           --------->GLK1(2)   --------->RAP2.3(1)   <------NtERF2  --------->ABI4(1)  ------>NtERF2  --------->LBD16  <---------ATERF1(1) <---------DEAR3(1) --------->ATERF1(2)                            <---------ANAC58                              ------- --------->DEAR3(1)                             <---------ANAC58                   ------>ZmHOX2a(2) --------->RAP2.3(3)                            <---------ANAC46                   --------->ANAC58 --------->RAP2.3(2)                           --------->ZAT2                      --------->ANAC58 <---------ATERF1(2)                           <---------ZAT2                      ================== -------->DEAR4(2)        <------NtERF2------>NtERF2                          ======================= -------->RAP2.3(1)      <------NtERF2 <------NtERF2                          <------ZmHOX2a(2) -------->ATERF1(1)      --------->LBD16--------->DEAR3(1)       <---------At4g35610         <------- -------->ERF1         <---------LBD16------>NtERF2              ----------->RAV1(2)        <-------- ------>ANAC46<----------DOF2         <---------RAP2.3(1)        --------->At4g35610       ------->TEIL --------ATERF1(1)    ------>NtERF2  <---------DEAR3(1) <-------GAMYB        <---------ARR11(3)   === ---ALFIN1<---------GLK1(2)         <---------LBD16    <---------MYB46(3)    --------->ARR11(3)   <--   tcgccgccgatagaatctttttgaggccggagtagtactgcggcgaggctgcttggactgttgagtcatctggctcgaagatcgatcgccatgaaccggg  6281800                                                                                 ------>NtERF2                                                                                --------->RRTF1(3)                                                                                --------->RRTF1(2)                                                                                --------->RAP2.6(2)                                                                                --------->DEAR3(1)                                                                                --------->RAP2.3(2)                                                                               --------->RRTF1(1)                                                                               --------->ATERF1(1)                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              <---------RAP2.3(1)                                                                              <---------ATERF1(1)                                                                              --------->ABI4(1)                                                                             --------->ATERF1(2)                                                                             <---------DEAR3(1)                                                                             --------->RAP2.3(3)                                                                             --------->RAP2.3(2)                                                                             --------->DEAR3(1)                                                                             <---------ATERF1(2)                                                                             --------->ANAC46                                                                            --------->ATERF1(1)                                                                            --------->ERF1  ------>ZmHOX2a(2)                                                                            --------->DEAR4(2)                  <---------TOE2(2)                                         --------->RAP2.3(1)      <---------ALFIN1<-------TEIL                                          --------->ORA47(2) -->LBD16         <---------TOE1(2)                         ------>NtERF2  <---------ATERF1(1) =============HOX2a_HOX2a                           <------ZmHOX2a(1)     --------->DEAR3(1)========= =============HOX2a_HOX2a <---------GLK1(2)        --------->ZAT14 <---------MYB52(1)      ========== --LBD16          <---------TOE2(3)                <---------ZAT18<-------GAMYB--------->RAP2.3(1) -LBD16------>ZmHOX2a(1)  <---------ARR14(2)     <---------At4g35610   --------->YAB1      <------ZmHOX2a(2) =============HOX2a_HOX2a --------->ARR14(2)     --------->At4g35610  <---------YAB1      <---------ARR11(3) ----ZmHOX2a(2)   --------->MYB59            <-----------HVH21 --------------------->WRI1 --------->ARR11(3)   atcaagctcctcttcggacttaggttcggattctccaaactcatcgaagtcagaggactctccgactccgttatcatcgccgccgctattgagatcgtca  6281900                                                                                   --------->At4g35610                                                                                --------->LBD16                                                                               --------->ANAC55(2)                                                                               <---------ANAC58                               --------->ANAC58                                <---------ANAC58                               --------->ANAC46                                <---------ANAC46                               <----------ID1                                  <---------ANAC55(2)                             <---------DOF5.7(2)                            <---------ARR14(2)                           --------->DOF5.7(2)                           <---------YAB1                  ----------->HVH21                                     <---------TOE2(3)               <---------LBD16 --------->ANAC58                        <-----------GT1     <------ZmHOX2a(1)   <---------ANAC46                              --------->MYB52(1) ===========HOX2a_HOX2a  <---------ANAC58    ---------->DOF2---------->DOF2 --------->ARR14(2)   ---- ===========HOX2a_HOX2a  <---------ANAC58  <---------ATHB12 <---------ZAT14 --------->GLK1(2) <------   tttgagaggacgagaacgacgggacgagcgtgaacgccaaattcaatgaaagagaaaacgagtaaagagagaataacgattccgtagcttaatattctca  6282000                                  --------->LBD16                                 --------->DEAR3(1)                                <------NtERF2                               ------>NtERF2                              --------->DEAR3(1)                  <---------ARR14(2)                  --------->ARR14(2)             --------------------->WRI1            <---------ALFIN1  <---------DEAR3(1)                                ---------->DOF2           --------->MYB46(3)--------->ATERF1(1)                            ---------->DOF2       ------>ZmHOX2a(1)     <------NtERF2                       <---------At4g35610 ----------->AtSPL8         <---------ATERF1(1)                  --------->At4g35610            *TSS- ---YAB1  ------>ZmHOX2a(1)<---------DEAR3(1)         <------ZmHOX2a(2) <---------WRKY18(1)   -------   ttgtacttcctcctccaccgtattcttcgtcgtcgccgtagtttctcagtgatcagatcgaattttcagatggatgaccaaagaaagaatgaagatgaaa  6282100                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                        <---------O2                                                                        <---------ANAC55(2)                                                                    <-----------HVH21                                                                   --------->ANAC46                                                                  ================MYC_MYB                                                                  ------->GAMYB                                                                  --------->DEAR3(1)                                                                 <------------AtMYB77                                                                 --------->MYB46(3)                                                                 =================MYC_MYB                                                                 --------->DEAR3(2)                                                               <---------ARR14(2)                                                            --------->YAB1                                                       ------------>CBF --------->ANAC55(2)                                                     <---------ARR14(2) --------->ANAC55(1)                                   ------->MYC3      --------->ARR14(2) --------->O2                                   <-------MYC3     --------->GLK1(1)   <---------TGA1a                                  <---------O2      <---------CCA1(2)   --------->bZIP60(2)             ------------>CBF     --------->O2    <---------ANAC55(2)   --------->TGA1a          ---- ----------->CBF         --------->AHL20(2)       --------->ANAC55(2)   --------->ANAC58        <---- --->DOF2  <----------DOF2 <------------CBF   <-----------HVH21<-----------GT1        ---------->ID1   ggggcaataacgtctttcaatagtccataaattgccacgttgaatcgttgtcacatatccaatagtaaccggccacgtaactagacttgtcttaataaac  6282200                               <---------AHL20(2)                            <---------ICU4                           --------->ICU4                      <-------GAMYB                     --------->MYB52(2)                 <------MYB83 <---------YAB1                 <------MYB46(1)    ----------------->AGL3 <---------YAB1   <------ZmHOX2a(2) <---------MYB46(3)      --------->YAB1  --------->AGP1<---------AtMYB61    ----------->GT1                                         -------- ----->TOE2(3)  --------->MYB59--------->AHL20(2)           <-------TEIL   <---------ANAC58  -------- -----ICU4    <---------MYB52(1)<---------AHL20(2)      <-------TEIL       <---------ANAC58  --------   attagatccaatttcggtttggtttgttgattattaattcggtttaatcgaaattggatacatacatgttatattttgcttatttatagttttatacgca  6282300                                                                                    <---------WOX13(1)                                                                                  -------->HAHB4                                                                                  --------->ATHB12                                                                                  <---------ICU4                                                                                  <--------ATHB1                                                                                 <---------YAB1                                                               --------->REM1(1) --------->ICU4                                                              <-------TEIL       <---------ATHB12                                                     --------->YAB1            --------->YAB1                                                    --------->ICU4           <---------ZAT14 ->ANAC58         <------ZmHOX2a(2)             <-----------TGA1             --------->ZAT14 ->ANAC58       <------ZmHOX2a(1)    ------->TEIL   <---------YAB1      --------->MYB46(3) ->ANAC46--------->MYB52(1)         <---------CCA1(2)<---------ICU4    >>>>>>>>>>>>>>>>>LFY   taaatacaaaaaaacagaggatcaaacagtttacatttgaatcttgtcttcgtcatcatcaagcttcatcaacatccactgtaatgattgaatcacttct  6282400                       ------>NtERF2                      --------->DEAR3(1)           <---------ANAC58           <---------ANAC58                                      <-----------GT1    <---------ZAT18   <---------DEAR3(1)                     <----------DOF2    <---------ZAT14<---------DEAR3(1)                  --------->ANAC46  --------->LBD16         <---  <---------SPL7 <---------MYB52(1)                  --------->ANAC46   --------->ANAC46         <--- ------>ZmHOX2a(2)--------->SPL7           ---------->ID1    <---------DAG2           --------->YAB1   tgatcgtacacttgcttctgttcggcgactctcttgtattgttttgtctccatctccacaacgcttttctccatccgtagcttcagaagcatagccatgg  6282500                 <---------ZAT2                 --------->At4g35610                 --------->ZAT2        --------->At4g35610        <---------ZAT2        --------->ZAT2        <---------At4g35610        ----------->RAV1(2)                <----------DOF2          <-----------GT1     --------->At4g35610        ------>ZmHOX2a(1)  --------->ANAC55(2)     <---------At4g35610 <------------------------ANAC81       ------->MYC3 ------ANAC58    <---------At4g35610   <---------At4g35610     <-------MYC3 ------ANAC58  <-----------RAV1(2)     <---------ZAT2       <---------ALFIN1     <---------YAB1  ----   cttcttcagcagctgattcagctgctcttctctccttctccagctctttcttcatgtaatctccacgttttctctctctcttcaccattgttctcagagt  6282600  Previous    Next  AGI:  At1g18260.1    Description:  suppressor of lin-12-like protein-related / sel-1 protein-related. similar to suppressor of lin-12-like protein-related / sel-1 protein-related [Arabidopsis thaliana] (TAIR:AT1G73570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68208.1); similar to SEL-1 [Glycine max] (GB:BAE02648.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96330.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Sel1-like (InterPro:IPR006597) Range:  from: 6278841    to: 6282096    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g18265.1    Description:  contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) Range:  from: 6282245    to: 6283286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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