Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->ARR11(3)     <-----------RAV1(2)           --------->GLK1(2)      <---------LBD16           <---------ARR11(3)     <---------HSFB2a(2)                 ------->GAMYB       --------->LBD16          ------>MYB46(1)                    <-----------GT1     <---------------------WRI1 ------>MYB83                   --------->ATHB12        --------->ARR11(3)   --------->ARR14(2)   --------->WOX13(1)                    <---------YAB1           --------->ARR14(2)   <---------ARR14(2)  --------->MYB46(3)                     --------->ICU4           <---------ARR11(3) ---------HVH21       <---------KAN4(2)                  --------->ANAC58              <---------GLK1(2) ----At4g35610      <------ZmHOX2a(1)  ------>NtERF2     --------->ANAC58              <---------ARR14(2) --->At4g35610    --------->ANAC46--------->HSFB2a(2)    --------->ANAC46          <---------At4g35610 ---DEAR3(1)      <---------TOE2(3)--------->LBD16--------->PCF2   --------->MYB52(1)----------->ARR10   tgtcaaatccgaaaatctctaaggaacaatcaccttccaggggcctattcatgtcccacaagacatgattaaccgaagaaaccagagcagattttgctaa  6183400                                                                      <------NtERF2                                                                     <---------HSFB2a(2)                                                                    <---------DEAR3(1)           --------->ZAT14                                          <---------ANAC46           <---------ZAT14                                         <---------MYB52(1)           --------->ZAT18                                --------->HSFB2a(2)         ------>ZmHOX2a(1)       --------->ARR14(2)                                 <---------HSFB2a(2)        --------->TOE2(3)       <---------ARR14(2)                      ------>ZmHOX2a(1)  <-----------HVH21 --------->YAB1      <---------GLK1(1)         <---------AtMYB61     <----------DOF2--------->HSFB2a(2)   ----------   acccttagaaatctgcactgcgatgtccattggagaggtctcccatctccttccttctttctcgataccgtcggggagaagagtaatcctaagcagtgaa  6183500                                                                                             <-------                                                                   --------->YAB1            <-------                                                            <---------ZAT6                ------->TEIL                                                         <---------STY1(1)       --------->YAB1<-----                                 <---------ANAC58     --------->ANAC58        --------->WOX13(1)    <                                 <---------ANAC58     --------->ANAC58       --------->AHL20(2)------                                <---------ZAT2       ------->TEIL --------->ICU4<---------ATHB12  --- ->GT1   --------->GLK1(1)      --------->ZAT2      <---------ALFIN1         <---------AHL20(2)<-----   acaaaaaccagaaatcaactaattgcaaaaccctagcttagcaaacaaattgatgcaccctagtgaaaatgatgaacaattaatcataaacgtatttact  6183600          ----------->HVH21          --------->ALFIN1        --------->ALFIN1      <---------ANAC58      ------>ZmHOX2a(2)      <---------ANAC46      <---------ANAC58    <---------ARR14(2)                                                           <---------ANAC46 ----GT1<-----------RAV1(1)         --------->ZAT2                  --------->ANAC58 --AHL20(2)                --------->At4g35610       ------>ZmHOX2a(1)         --------->MYB52(1) ----ANAC58             <---------ZAT2    <---------ANAC46          --------->ANAC58          ------- ---------WOX13(1)      --------->At4g35610          --------->HSFB2a(2)      ----------->TGA1------- --->ANAC55(2)          <---------At4g35610     --------->GLK1(1)<---------ARR14(2)         --------- ------>ATHB12 <------NtERF2     <---------At4g35610 <---------HSFB2a(2)      ----------->HVH21 ----ANAC58  <---------ANAC46    <---------ZAT2 <---------GLK1(1)--------->ARR14(2)       --------->CCA1(2)   tgattggatcgtgtggccgagattgaagctgctcaagctgctcggcttggatttcctcgaagagcctgatacgcttggggatgacggatgagagataagc  6183700                     --------->ANAC46                                                     <---------ZAT14                  --------->KAN4(2)                                                       <---------At4g35610              <---------ICU4                                                              --------->At4g35610             --------->ICU4                                                       <---------ANAC46 <---------YAB1 <---------YAB1       <---------At4g35610                          <---------bZIP60(2) -->ANAC58   <---------YAB1          --------->At4g35610                        <---------TGA2(2)   - -->ANAC58 --------->YAB1      <---------MYB46(3) <------ZmHOX2a(1)            ----------->TGA1    *TSS >CCA1(2) --------->ICU4--------->DEAR3(1)    --------->TOE1(2)              --------->At4g35610<----   ctcatccttgggatgatgattattcgccatcgatggatgagcagagaacgaaggacaaatagaaactatagaatatagaagatgacgttgagagcagagg  6183800                                                      --------->LBD16                         <-----------TBP  --------->ZAT14      <----------DOF2                        <----------DOF2   <---------ZAT14   --------->ANAC58                       <---------------AGL15         <---------ANAC58                       --------------->AGL15         <---------ANAC46                      <-----------------AGL3     <---------ANAC46                      ----------------->AGL2     <---------ANAC58                 --------->At4g35610      ---------->DOF2   --------->ANAC58                   ------               <---------WRKY38(1)    --------->ZAT6 <---------ANAC58                         <------  <---------GLK1(2)   ----------------->AGL3     <---------ANAC58            <----------DOF2  ------- ---------->ARR10<---------At4g35610----------->RAV1(1)------>NtERF2   <----------DOF2        <------ --ZmHOX2a(1)  <---------WRKY12    --------->REM1(1)<---------LBD16    <---------DAG2         -------   agtagattatcccaaggtcaacttcccttttatagctacaacactaaagtgacttgcgggccaagctttagagcttttcctttcattttttgtaataagg  6183900                           <----------DOF2                        ------>MYB46(1)                        ------>MYB83                      <---------MYB46(2)                      <---------MYB111(2)                      <---------MYB52(2)                      <---------MYB59                      <---------MYB111(1)                     --------->ANAC58                     <---------At4g35610   <----------ID1    --------->ANAC46 --------->YAB1      --------->ANAC58                  --------->AHL20(2)       <----------DOF2 ----->GT1          ------->TEIL                      --------->AHL20(2)  <---------ICU4 ---TOE2(3)       <-------TEIL --------->ANAC55(2)<---------AHL20(2)     <---------AHL20(2) -->DAG2       <---------At4g35610       <----------DOF2      <-----------GT1<-----------GT1 ---TOE1(3)    --------->At4g35610   <-----------GT1  <---------AHL20(2) <---------YAB1 -->MYB59    <-----------RAV1(2)  <---------ICU4  --------->AHL20(2)   --------->YAB1   taataacaacaagtggcagatgcacctaactttacataatttccttttgtatttaaataattttctacaatatttataatttcttttcaattgaattgta  6184000                                                  ----------->HVH21                                                <---------ANAC46                 <---------YAB1     -                                                <---------ANAC58               <---------AHL20(2)   -                                      <-----------------AGL2       <---------TOE2(3)   ---------->ID1                     ---------->DOF2<-----------GT1   <----------DOF2          --------->YAB1 -------                   --------->AHL20(2) <-----------------AGL3     <---------AHL20(2)  <---------MYB46(3)                   <---------AHL20(2) ----------------->AG<----------DOF2      --------->AHL20(2)  <-        --------->AHL20(2)      ------->TEIL    <---------ANAC58--------->AHL20(2)   <-----------RAV1(1)   gttttgttgataaaatgcaaattaaaagtatatgtatataacctattttggcgtgactttctttgatttaatgtttcacatttatatttgttgcattctc  6184100                 --------->ATHB12                 <--------HAHB4                 --------->ATHB51                                         ---------->ID1                 <---------ICU4                             --------->ZAT18 -------->YAB1  --------->ICU4                              <---------ZAT18 -------->AHL20(2)                           <---------AHL20(2)     <---------AHL20(2)              - -->TOE2(3)  <---------YAB1 <---------YAB1  --------->AHL20(2)     <---------YAB1                 <-- --------ATHB12 <---------YAB1 <---------TOE2(3)           --------->ALFIN1               ---------->DOF2   aataatatccaaatgaccattattaggcctattaatgtggaagctataaaatcagtttgaagtgggcttattatttgtagttttgggctcttaaaagcct  6184200                                              <---------ZAT6                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                                            <---------ANAC55(1)                                            --------->ANAC55(2)        ------->TEIL                        <---------ANAC55(2)     <---------REM1(1)                 <------MYB83   -------->HAHB4                      <---------MYB46(3)                             --------->ARR14(2)   --------->YAB1                      <------MYB46(1)                                <---------ARR14(2)   <---------ICU4                     <---------AtMYB61                             --------->LBD16  --------->ICU4                 <---------LBD16                                  <---------LBD16  <---------ATHB12               <---------HSFB2a(2)                        <-------GAMYB <---------TOE2(3)          <---------HSFB2a(1)                            <------MYB46(1)          - -------->YAB1              --------->HSFB2a(1)                            <------MYB83            <- -------YAB1   --------->GLK1(2) --------->HSFB2a(2)                      <---------AtMYB61 <--------P   attaatgatgaagctagaatcagttttgcaacgttctcggatggtttcgtgttacaaaaatgtagtcgggttcgatttggttgaaccgggtctggtagac  6184300  Previous    Next  AGI:  At1g17960.1    Description:  threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative. Identical to Probable threonyl-tRNA synthetase, cytoplasmic [Arabidopsis Thaliana] (GB:Q8GZ45;GB:Q9LMT4); similar to threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) [Arabidopsis thaliana] (TAIR:AT5G26830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45124.1); contains InterPro domain Aminoacyl-tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Anticodon-binding; (InterPro:IPR004154); contains InterPro domain Threonyl-tRNA synthetase, class IIa; (InterPro:IPR002320); contains InterPro domain TGS (InterPro:IP Range:  from: 6180889    to: 6183799    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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