Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                                               <---------YAB1                                               --------->ICU4                                             <--------HAHB4                                             --------->ATHB51                                             -------->HAHB4                                            --------->AHL20(2)                                            --------->ICU4                                            <---------YAB1                                            <---------ATHB51                                          --------->YAB1                       ----------->GT1                                         <---------YAB1                       --------->DAG2          --------->HSFB2a(2)          --------->YAB1     <-------MYC3      ---------->DOF2          <---------HSFC1(1)     --------->At4g35610      ------->MYC3<---------ANAC46          <---------HSFB2a(2)    <---------At4g35610  <-------TEIL    <---------ANAC58   --------->YAB1              --------->DAG2<---------ICU4           <---------ANAC58  <-------TEIL             <---------AHL20(2)--------->YAB1         ------->TEIL --ALFIN1 --------->HSFC1(1)  ---------->DOF2<--------ATHB1      <---------REM1(1)       ------->TEIL   ttgattcatattctagaagttgtccatatataaaaagctgaccataataattaatatacatgtgtacatgtagcttgtaaaaggttatacgaacgtagat  6177200                                          <---------AHL20(2)                                         <---------AHL20(2)                                         <---------AHL20(1)                                         --------->AHL20(2)                                         --------->ARR11(3)                                         <---------ARR11(3)                            <---------ATHB12                                      --------->AHL20(2)                              ------>MYB46(1)                                    --------->AHL20(2)                                ------>MYB83                               ----------->GT1                                        --------->ANAC58                               <------MYB83                                       ------>NtERF2         <---------At4g35610   <------MYB46(1)                                --------->ANAC58         <------NtERF2    --------->MYB59--------->AHL20(1)                   --------->ANAC46         --------->At4g35610 <--------P --------->AHL20(2)                    --------->ANAC58        <---------MYB46(3)<---------TOE2(3)         <--------P       <---------TOE1(3)--------->ANAC46       <---------RAP2.6(2)<---------TOE1(3)     <---------TOE2(3)    <---------TOE2(3)--------->ANAC58    <---------AtMYB61     <---------AtMYB61     <---------TOE1(3)----------------------->TaNAC69(2)   gaagtattggtggctgaagtagagggtttaggttggaaaaaaatatatttaagggtagacgttgaaagtttaacgaaaacaccccaccaagcaatctctt  6177300                                                                                                  <--                                                    <---------AHL20(2)                           ----                                                  <---------YAB1                                 <---                                                <--------HAHB4                              ---------                                                <---------ICU4                              <--------                                                --------->AHL20(2)                          ---------                                                --------->YAB1                            <----------                                                --------->ATHB51                       <---------ICU4                   <-----------GT1              -------->ATHB1                       <---------AHL20(2)               <---------DAG2                  <---------ATHB51                    <---------AHL20(2)               <----------DOF2                 --------->ICU4                   ------->TEIL---------   ------>ZmHOX2a(1)     <---------YAB1        <---------ATHB12              ----------->GT1--------- ----------->RAV1(2)  <----------DOF2--------->WOX13(1)                 --------->YAB1--------->ICU4   ccctcctgtgtaatctccttttttcttttcattactcatcaattactcaattattaaaactctcacataaaccaaaataatgtatataaaaattacgaaa  6177400  ----------->GT1 -------AHL20(2) ----->AHL20(2) ------AHL20(2)           <---------ANAC55(2)                            --------->LBD16 >ANAC55(2)        <--------P               <------MYB83                 ----------->GT1 -ANAC55(2)      ----------->GT1            <------MYB46(1)             <---------DEAR3(1) >ANAC58      --------->DAG2                <---------MYB46(3)         <---------LBD16 -GT1        ---------->DOF2               --------->MYB59           ------->GAMYB >ANAC46  --------->AHL20(2)         --------->ALFIN1             --------->WOX13(1) >ANAC58 --------->AHL20(2)   ---------->DOF2    <---------HSFB2a(2)--------->MYB46(3)        <------   taaatggaaaaataaaaaagggtagattacttaaaaggagtgtgtttggttagggaagacgttggcatcaatcgccggtgaaaacctctctccaaacttt  6177500                      <---------AHL20(2)                      <---------AHL20(1)                      --------->AHL20(1)                     --------->AHL20(2)                     --------->YAB1              <-----------ARR10              --------->GLK1(2)                       >>>>>>>>>RAP2.2              --------->ARR14(2)                    --------->ARR11(3)              <---------ARR14(2)                    <---------ARR11(3)              ------->TEIL<-------TEIL         --------->AHL20(2)        <---------AHL20(2)    <-----              <---------ARR11(1)            <-----------TBP<---------AHL20(2)       ------->TEIL<----             <---------ARR14(1)  <----------DOF2<---------AHL20(2)       ----------->TBP       <-----          <---------TOE2(3)--------->YAB1   --------->AHL20(2)           --------->AHL20(2)   <XXXXXX <---------ALFIN1   <---------YAB1 ------------>CBF--------->CCA1(1)   ----------->TBP   <-----------RAV1(1) ----DOF2--------->MYB52(1)<---------ICU4 <----------DOF2  --------->AHL20(2) <-------TEIL   <-------   ccctcactctctaacgaatcttattatattcattactttcaattctttatataatatctaaataaatatacttatataaatacatgtatgtatggtgctg  6177600                                                        --------->STY1(1)          *TSS                                          <---------STY1(1)       <---------At4g35610                             --------->TOE2(2)                     <-------       --------->At4g35610                             --------->TOE1(2)                     -------- ------RAV1(1)                                  --------->TOE2(3)                          --------->AHL20(2) ---GAMYB<----------DOF2                       --------->REM1(1)                         <---------AHL20(2) ----MYB46(3)                                 ------>MYB83                             <---------AHL20(2) XXXXXXXXXXXXXXMIR390A/B                      ------>MYB46(1)                  ----------->RAV1(1)  < --At4g35610           ------>ZmHOX2a(1) <---------ALFIN1          <-----------GT1     --------->AHL20(2)   ttgctcttcagctttcttcttgttcctacatacccatcttccctcacctacatcaaacctagggtttcttaactatatcaacaacatatataaatttata  6177700                                ---------->DOF2          <---------AHL20(2) <------ZmHOX2a(2)          --------->AHL20(2)<---------ARR11(3)         <----------DOF2---------->DOF2                                               --------->At4g35610      <---------YAB1 --------->YAB1                         --------->ZAT14    --------->ARR14(2)    ----------->GT1 <------ZmHOX2a(2)                      --------->ALFIN1    <---------ARR14(2) --AHL20(2)        --------->ARR11(3)           <---------AHL20(2)             <--------------------- ->AHL20(2)--------->ATHB12 --------->ARR11(3)  --------->AHL20(2)   ------>NtERF2    <---------At4g35610 ---------TOE2(3)  <---------ARR11(3)     ----------->GT1<---------ANAC46     <---------GLK1(1) -----   tataggttgtgatttattgaagatcataaagatcaaaaggagagaggtattaaaaaatgatgtgtagtcgaggccattggagacctgcagaagacgagaa  6177800                                       --------->ANAC58                               <---------ICU4                               --------->ATHB51                     ------>ZmHOX2a(2)                               --------->ATHB12                   --------->ARR14(2)                              <---------YAB1                      <---------AGP1                              --------->ICU4                      <---------ARR14(2)                            --------->YAB1            --------->At4g35610                           ------>ZmHOX2a(1)       <---------At4g35610                      <------MYB46(1)  --------->ANAC46--------->ARR11(3) --TaNAC69(2)         <------MYB83     --------->ANAC58<---------ARR11(3)         <----------DOF2 ---->GLK1(2)        --------->MYB59  --------->SPL7<---------GLK1(2) ----------->GT1     ---------->DOF2   gctaagagaactcgtcgaacaatttggtcctcataattggaacgccatagctcagaagctctctggtcgatctggtaaaactgactttatattaaagtca  6177900                                                        --------->AHL20(1)                                                        <---------AHL20(1)                                                       --------->AHL20(2)      <----------DOF2                                                     --------->AHL20(2)     <---------AGP1                                                   --------->AHL20(2)       <---------ARR14(2)                                             <---------AHL20(2)             --------->ARR14(2)                                         <---------AHL20(2)                 <---------ARR11(3)                                        --------->ARR11(3)                  --------->ARR11(3)                                        <---------ARR11(3)                 <---------CCA1(2)                                        <---------AHL20(1)              <---------WOX13(1)                                        --------->AHL20(2)       <------MYB83 ------>ZmHOX2a(2)              ---------->DOF2           --------->AHL20(1)       <---------MYB46(3)                <-   --------->AHL20(2)                   <---------AHL20(2)   <-----------RAV1(1)            <--------P   <---------AHL20(2)           ----------->GT1    <---------AHL20(2) --------->ATHB12   <---------TOE2(3) --------->TOE2(3)             <---------TOE2(3) <---------AHL20(2)  <---------YAB1      <---------TOE1(3) <----------DOF2        <---------AHL20(2)   --------->AHL20(2)  <------MYB46(1)        <-----------RAV1(2)   tttctttaatttcttacaaagcatatataaactagggtttaatatatttatataaaaatatatatgttggtttgattggatcttttggtttcaggtaaga  6178000                                         --------->ANAC46                                         ------->GAMYB                                      <-----------GT1                                <---------TOE1(2)                                <---------TOE2(2)                               ------>ZmHOX2a(1)                              --------->TOE2(2)                              --------->TOE1(2)                             ------>ZmHOX2a(2)                                                <------                             =====================================HOX2a_HOX2a                 ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                  >>>>>>>>>TBF1                 <------ZmHOX2a(2)                            =============HOX2a_HOX2a  --------->ANAC46                      ---------                           --------->ARR14(2)     <-----------HVH21                     <---------At4g35610            ----------->GT1<---------ARR14(2)    <----------DOF2  >>>>>>>>>TBF1  <---------ANAC58      <XXXXXXXXXXXXXXXXXXXXMIR170 <------ZmHOX2a(1)  <---------LBD16       <----------DOF2  <-------- --------REM1(1)   <---------ATHB12   --------->MYB52(1)   <------ZmHOX2a(1)     <---------ANAC58   gttgtagattgagatggtttaatcaattggatcctaggattaaccgaaaccctttcacggaggaagaagaagaaaggcttttagcgtctcatcggatcca  6178100  Previous    Next  AGI:  At1g17950.1    Description:  MYB52 (myb domain protein 52); DNA binding / transcription factor. similar to MYB54 (myb domain protein 54), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G73410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68250.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 6177610    to: 6179282    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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