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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                     <-----------HVH21
                    <----------DOF2
------ANAC58      <------NtERF2                                                          --------->ANAC46
------ANAC58  <---------ATERF1(1)                                                        --------->O2
------ANAC46 --------->WRKY12                                                            <---------O2
-TGA1a       --------->WRKY38(1)         --------->ZAT6                                  <---------TGA1a
-O2         <---------MYB52(1)         <-----------GT1             ----------->GT1       --------->bZIP60(1)
>TGA1a     <-------GAMYB         <---------MYB52(1)             <-----------GT1          --------->TGA1a
>O2    ------>ZmHOX2a(1)      ---------->ID1            <---------YAB1      <---------TOE2(3)
 
cctgttcttcctcccgttggcccctttcacctcgtcgttttgtaactctagacacacttattcttatatactgtatattgtggttttttctcacgtcgtt  6089100
                    --------->ANAC55(2)                                                           --
                  <---------ALFIN1                              --------->WOX13(1)         <--------
        <---------MYB52(1)                                  --------->ANAC46         --------->YAB1
      ----------->GT1                                       --------->ANAC58        <---------ATHB12
<---------YAB1   ----------->HVH21         --------->TOE2(3)--------->ANAC58  <-----------GT1  <----
 
tttatgactctgttaattccctcacgttttatcttatagataagaacatcaatatcgattagcaagccaatccaatacattttacaaatgataaacaaaa  6089200
               --------->TGA1a
               <---------O2
               --------->O2
               ----------->GT1
               <---------ANAC46
               <---------TGA1a
         ------->MYC4
         <-------MYC2
         ------->MYC2
         ------->MYC3                     --------->AHL20(2)                                   -----
--------->GT1 <-----------------------TaNAC69(2)                                              <-----
-------AGL15----------->HVH21<---------ATHB12         --------->ZAT18--------->TOE2(3)        ------
-----ICU4<-------MYC3   --------->ZAT6    <---------AHL20(2) ----------->GT1            --------->TOE2(3)
 
atggcaataacatgtgcgacgtgaataacacaatcagtttgaaaattaaaaaacgagtgcgaagaagtgaaacattagtttggaaatgaaatctaaatta  6089300
                                                                            --------->ANAC55(2)
                                                                    <---------MYB52(1)
                                                                   --------->LBD16
           <---------ICU4                                         ----------->GT1
      <---------YAB1                                              --------->ANAC55(2)
    <---------ICU4                                                --------->ANAC58
    --------->YAB1                                                --------->ANAC58 <---------YAB1
 --------->WOX13(1)                                               <---------ANAC55(2)
----->DOF2 --------->YAB1                   --------->ATHB12     <---------LBD16  <-----------GT1
----AHL20(2)                       <---------GLK1(2)       --------->ALFIN1<---------TOE2(3)
--->AHL20(2)                     <---------YAB1        ---------->DOF2     --------->MYB59
 
aagtcagtcatgactcatgactcatgtggatgtgttctgattctgaacaattggattcaaaagtgtgtcccgtaattttaggtattttcaatgttatccc  6089400
                                                                                            <-------
                                                                                           <--------
                         --------->ARR11(3)                                                <--------
              <-----------GT1       <---------AHL20(2)                              <---------ANAC55(2)
          --------->AHL20(2)       --------->AHL20(2)                           <-----------HVH21
        --------->AHL20(2)         <---------AHL20(2)                  <-----------GT1   --------->ICU4
  <-----------GT1        <---------ARR11(3)   <---------YAB1        ----------->TBP --------->ANAC55(2)
 
atatttcacatttttatatactatacaagatgttcaaatttttttttttgttatagcaaatacaaaactctataaaacctctcagtcatgtaatgctttt  6089500
                                                                                                 ---
                                        --------->AHL20(2)                                      <---
                                        <---------AHL20(2)                                     -----
                                     <---------ICU4                                            -----
                                    <---------AHL20(2)                                        ------
                                    <---------ATHB51                                         -------
                                    --------->AHL20(2)                                      <------NtERF2
---DOF2                   ---------->DOF2                        ----------->GT1           ------>NtERF2
-ANAC58         --------->ANAC46  --------->YAB1                <------ZmHOX2a(1)----------->RAV1(1)
-ANAC58  *TSS   --------->bZIP60(2) --------->ICU4    <---------CCA1(2)         <-----------------AGL1
 
ctcttcacataccacaaacacatcacacttatagcaaaaataattaatctctctcccatatcacgaaggagaaaaacaatatgacaacatatggcaccaa  6089600
                                                                                     ------>NtERF2
                                                                                     --------->ABI4(1)
                                                                                    --------->RAP2.6(2)
                                                                                    --------->DEAR3(1)
                                                                                    --------->RRTF1(2)
                                                                                    --------->RAP2.3(3)
                                                                                    <---------ALFIN1
                                                                                   --------->DEAR3(2)
                                                                                  <---------ATERF1(1)
                                                                                <-------MYC2
                                                                                <-------PIF5
                                                                                ------->MYC3
                                                                                <-------MYC3
                                                                               --------->ANAC58
                                                                   <---------LBD16------>NtERF2
                                                                  --------->CCA1(2)--------->ORA47(2)
                                                                  <------ZmHOX2a(2)--------->RAP2.3(1)
                                                                 --------->ARR11(1)--------->RAP2.6(1)
                                                                 <---------ARR14(2)--------->ERF1
                                                                 --------->ARR14(2)<------NtERF2
                                                                 <---------ARR11(3)--------->ATERF1(1)
                                                                 --------->ARR11(3)--------->RRTF1(1)
                                                        ------>MYB46(1)        --------->ANAC46
                                                        ------>MYB83           --------->ANAC58
                                                       ----------->RAV1(1)     --------->TGA1a
                                                      ===================================MYC_MYB
                                                     --------->MYB46(3)       ------>NtERF2
                                                     <---------MYB52(2)   --------->bZIP60(2)
                                                     <---------MYB55(2)   --------->ANAC58
                                                    --------->ANAC58      --------->ANAC46
                                                    =====================================MYC_MYB
                                                    --------->ANAC58      --------->ANAC58
                                                    -------->P   --------->AGP1<---------ALFIN1
                                                   --------->WOX13(1)    <------NtERF2<------NtERF2
                                                  --------->MYB46(3)  ------>NtERF2--------->DEAR4(2)
                                           --------->LBD16      --------->RVE1(1)--------->ANAC46
                                           <-----------HVH21   ----------->ARR10------->MYC2
                                          <---------TGA1a    ============================bZIP_DOF
                                          <---------O2--------->AtMYB61 <---------ATERF1(1)
------>YAB1                               --------->O2------->GAMYB------>ZmHOX2a(2)--------->DREB2C(2)
------ATHB12              <---------ZAT2  --------->TGA1a    ---------->DOF2 <---------ALFIN1
->MYB83  --------->MYB52(1)       <-------TEIL <---------bZIP60(1)--------->ARR14(1)--------->RRTF1(3)
->MYB46(1)                --------->ZAT2  ===================MYC_MYB<---------RAP2.6(2)       ------
--->WOX13(1)           <---------ALFIN1   ==============================bZIP_DOF------->PIF5  ------
-->MYB46(3)           <------NtERF2       ====================MYC_MYB--------->LBD16--------->RAP2.3(2)
 
tcagaagtcgtctaacgacttagcccccaagctggagtacatcacccgtggcatcaaccaacacaaaagatccggcctcgccacgcgccgcccttggaag  6089700
                                          <------NtERF2
                                         ------>NtERF2
                                        --------->DEAR3(1)
                                       <---------MYB55(2)
                                       --------->MYB46(3)
                              --------->LBD16
                             --------->LBD16
                             --------->ANAC58
                             --------->ANAC46
                            --------->LBD16
                            <---------LBD16                        <---------ALFIN1
             --------->ARR14(2)      --------->ANAC58             -------->P    <---------HSFB2a(2)
--->ANAC58   <---------ARR14(2)      --------->ANAC58     --------->YAB1        --------->HSFB2a(2)
--->ANAC58 <---------DEAR3(2)--------->ANAC58    --------->ZAT6   <---------REM1(2)
 
caaatgctagacctcggttccttcaacttcccccgcaaactagccaccgtgatcactagaatcagagccaacacggtctatttccagaccaattacacca  6089800
                                                                          <---------ANAC58
                                                                          <---------ANAC58
                                                                          <---------AtLEC2
             --------->LBD16                                             <-------TEIL
           <---------LBD16         <---------GLK1(1)                 <---------DEAR3(1)
     ------>ZmHOX2a(1)     --------->ATHB12                       <---------REM1(2)
 <---------SPL7         ----------------->AGL1                   <---------ALFIN1                 --
<---------ANAC58        <-----------------AG                --------->ANAC46                   -----
<---------ANAC58        <-----------------AGL1   --------------------->WRI1           ------>ZmHOX2a(1)
 
ttgtcgtcctcttctccgtatttctcagcctgatttggaatcccttctccctcttagttctactcgccctactcggtgcatggctcttcctctacttcct  6089900
                                                        <---------ICU4
                                            <---------ANAC58
                                            <---------ANAC58
                                           --------------->AtSPL3
                                           --------------->AtSPL8
                                          <---------ARR11(1)
                                   --------->MYB46(3)   --------->YAB1
                       -------->ZAP1<---------ALFIN1 --------->YAB1      <----------DOF2
        --------->At4g35610      <---------WRKY18(1)<---------YAB1     <---------DAG2
      --------->MYB46(3)       <---------WOX13(1) --------->YAB1    --------->ZAT6
     ------->TEIL     <---------At5g28300 --------->ARR14(2)        <-----------GT1      <----------
------->LBD16        <---------WRKY18(1)  <---------ARR14(2)       <---------YAB1 ------>ZmHOX2a(1)
->ZmHOX2a(1)        ----------->HVH21    <---------CCA1(2)     <-------GAMYB      <----------DOF2
 
ccgtgatgaaccgctcactgtttttgaccgcgagattgaccaccgtatcgtacttataatcatgtctgttatcactctttccatcctttttttaactgat  6090000
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AGI:  At1g17700.1   
Description:  prenylated rab acceptor (PRA1) family protein. similar to prenylated rab acceptor (PRA1) family protein [Arabidopsis thaliana] (TAIR:AT1G55190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45718.1); contains InterPro domain Prenylated rab acceptor PRA1 (InterPro:IPR004895)
Range:  from: 6089510    to: 6090316    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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