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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                               ---------->DOF2
                                         <---------ZAT2             --------->MYB52(1)
                                         --------->ZAT2             ------>MYB46(1)
                                         --------->At4g35610        ------>MYB83
                                         <---------At4g35610       --------->MYB55(1)
                                       <-----------RAV1(2)        <---------MYB59
                                     <-----------HVH21            <---------MYB46(2)
                                     <-----------TGA1     <---------AGP1                   <--------
                                    --------->bZIP60(2)  <---------At4g35610       <---------CCA1(2)
           <---------At4g35610      ============================MYC_MYB         <-------TEIL<-------
          --------->ALFIN1          ======================bZIP_DOF<---------MYB52(2)  <---------ANAC58
       --------->ATHB12             --------->O2         --------->At4g35610 --------->ZAT2------>ZmHOX2a(1)
-------->At4g35610                  <---------O2       <--------P <---------MYB111(1) <---------ANAC58
-------->ZAT2                ---------->DOF2--------->LBD16     ------->TEIL --------->At4g35610
----ZmHOX2a(1)------>NtERF2  =================bZIP_DOF--------->At5g28300    <---------At4g35610
-ZmHOX2a(1)--------->At4g35610      --------->TGA1a   <---------MYB52(1)    --------->GLK1(2)
 
ggagctcgaatgagtgctgccatggccgtagtaaaagcctcgtcagccgagaaagacggtagctctgaacctaacgaagaagctgcatagcttcctcggc  6007900
                                                                                      --------->ZAT18
                                                                                      <---------ZAT18
                                                                                   --------->ZAT2
                                         <---------ZAT2                            <---------At4g35610
                                         <---------At4g35610                       --------->At4g35610
                                         --------->ZAT2                            <---------ZAT2
                                   ------>ZmHOX2a(1)                              ==================
                              <---------GLK1(1)                                   <-----------RAV1(1)
                              --------->GLK1(1)                                   ------>ZmHOX2a(1)
 ---------->DOF2         --------->At4g35610                          <---------ANAC55(2)
-LBD16            --------->At4g35610    --------->At4g35610          --------->ANAC55(2)     ------
--DEAR3(1)        <---------At4g35610<---------ALFIN1       <---------At4g35610 ----------->RAV1(2)
 
tcttgaaagaagaagatgctaagctctccgatgaaatcctccacagcttccatttcttcttgctgctcttatcacttaacttctcctgctgcacaattaa  6008000
                 --------->DAG2
                ---------->DOF2
             <------MYB83
             <------MYB46(1)
             ----------->GT1                         <---------ANAC58                          -----
            --------->MYB46(2)         <------ZmHOX2a(2)      <---------YAB1                   =====
         --------->ATHB12             <---------ARR11(3) --------->ANAC55(2)                 <------
    ==========================HOX2a_HOX2a            <---------ANAC58<---------ANAC46<---------GLK1(1)
    <------ZmHOX2a(2)                 --------->ARR11(3)-------->P   --------->ANAC55(2)    --------
   <---------ARR11(3)             ---------->DOF2   --------->At4g35610              --------->CCA1(2)
   --------->ARR11(3)  <------ZmHOX2a(1)            <---------At4g35610             --------->ARR11(3)
===========HOX2a_HOX2a =======================HOX2a_HOX2a----------->RAV1(2)    <---------MYB52(1)
--->MYB52(1)--------->MYB59   <----------ID1      <-----------GT1   <---------LBD16 <---------ARR11(3)
 
cagagagatcaatgtttggtaaagtaggaagaaacaacaaagatcgaggcattttagcttacctgatcatttacgggttttctgttagatatcagtgatc  6008100
                 --------->MYB46(3)
                --------->ANAC58
                --------->ANAC58
                --------->ANAC46
               ------>MYB83
               ------>MYB46(1)
              <---------ALFIN1
             --------->MYB46(3)
         ------>ZmHOX2a(1)
         ----------->HVH21
        XXXXXXXXXXXXXXXXXXXX>MIR3440B-5P                                  --------->ANAC58
->ZmHOX2a(2) <---------MYB55(2)                                      <---------LBD16
================HOX2a_HOX2a               <<<<<<<<<MYB2       --------->YAB1                       <
---ARR11(3)--------->PCF2          --------->ARR11(3)         <-----------GT1                    <--
->ZAT14----------->RAV1(2)         <---------ARR11(3)      --------->YAB1 --------->ANAC58       ---
 
taatccaatttcctgacccacccatcttctcaaatcgagaccttggttttcgaattctacaaaaatcacaacttcggaagctattgattcaaaaattcga  6008200
                                                           <---------WOX13(1)
                                                 <---------ANAC58
                                                 <-------GAMYB
                                                 <---------ANAC58
                                                <------MYB83        <---------TOE2(3)
                                               --------->MYB59   <---------WOX13(1)
                           ---------->DOF2  <---------ARR14(2)<---------YAB1              ----------
                      ----------->GT1   --------->LBD16  --------->ATHB12                -----------
                      --------->ANAC58 --------->HSFB2a(2)*TSS<---------TOE2(3)          <---------ZAT6
                      --------->ANAC58 <---------HSFB2a(2)<------------CBF         --------->ANAC58
----------DOF2       --------->DAG2   <---------LBD16<---------ANAC46              --------->ANAC58
-------HSFC1(2)     ---------->DOF2   <---------ANAC46  <---------YAB1       ---------->DOF2   -----
------>HSFC1(2)--------->ALFIN1<---------GLK1(2)<------MYB46(1) <------------CBF  --------->ZAT18
 
agctttggagcttgaaatgtgggaaaagcaaaaagattgtttctgggaatttggttgtgttgattgagattgatgttgacaaaagttcgcaagtgttaaa  6008300
                                                ------------>CBF
                                               --------->ANAC58
                                             ---------->DOF2
                                           --------->ANAC58
                                           --------->ANAC58
                                          --------->SPL7
                                        <---------SPL7              --------->At5g28300
                                       <---------ANAC58            ----------->GT1
                                       <---------ANAC58    --------->AHL20(2)
                 <----------DOF2      <---------------AtSPL8    --------->MYB52(1)
->GT1         <---------ARR11(3)      <---------------AtSPL3 --------->YAB1   <---------TOE2(3)
>GT1--------->At4g35610        <------------CBF--------->ANAC58 ------------>MYB.PH3(1) <----------DOF2
----->DOF2    --------->ARR11(3) <-----------RAV1(1)    --------->TOE2(3)  <----------DOF2     <----
 
aagaagaagcagagagagaacttttgaattttgaaattgttggggtacgaaagcaattttcttaaaataacggttaaactttaggttttctcttttatat  6008400
                --------->LBD16
      --------->LBD16
     <---------HSFB2a(2)                                                                      <-----
     --------->HSFC1(1)                                                                    <--------
     <---------HSFC1(1)                           <-----------GT1          --------->At4g35610<-----
     --------->HSFB2a(2)                --------->TOE2(3)                  <---------At4g35610------
-----AHL20(2) <---------LBD16  <----------DOF2   <-----------GT1         <---------WRKY38(1)  <-----
 
tatttgttccagaaattccctgagaacccctctacttttgtattctcaatttttaacccataagttattagactgggcaactcaatccattttagtgtcg  6008500
                                                         <------MYB83
                                               <<<<<<<<<<<<<<<<<LFY
                                            --------->YAB1
   ------------>CBF                         <---------ICU4
----ANAC46       <---------DEAR3(2)        <---------YAB1<------MYB46(1)
---RAV1(1)       <---------MYB46(3)        --------->ICU4<---------MYB46(3)      *TSS         ------
----ANAC58       <------MYB46(1)        <---------MYB52(1)            --------->ZAT14         ------
--->ETT(1)       <------MYB83   <---------MYB52(1)<------------CBF    <---------ZAT18       <-------
----ANAC58      <---------DEAR3(1)    ----------->GT1<---------MYB46(3)  --------->ANAC46   --------
 
ggtttgcacaatacccgagtcggttcgatctactcgttaatctgttattattacattggatggttcacatttgtacacactatttcaagctcagaccaaa  6008600
                                                                --------->ARR14(2)
                                                                <---------ARR14(2)
                                                               <------NtERF2
                                                             <---------ANAC46
                                                   <---------YAB1
                                                   <------ZmHOX2a(2)
                                       ---------->DOF2       <---------ANAC58
                                     <------ZmHOX2a(2)       <---------ANAC58         --------->HSFB2a(2)
                                    <---------ARR11(3)      <---------LBD16           <---------HSFB2a(2)
>MYB83                              --------->ARR11(3)<---------YAB1              <----------DOF2<--
>MYB46(1)             <---------ARR11(3)          <---------ARR11(3)            <---------------AGL15
--MYB59               ------------------------>ANAC81--------->TOE2(3)          --------------->AGL15
->AtMYB61             --------->ARR11(3)          --------->ARR11(3)     ---------->DOF2 <--------P
 
ctaaacaaactcgtctacatttgaagaactcaaaaacaagatcaaagaaggaagatcattaatggcggaaccaaaacaaagctctctttctggtaagaca  6008700
                                  <----------DOF2
                              <---------ZAT18
                              --------->ZAT18
                              ------>NtERF2  ---------->DOF2
                             <---------RAP2.6(2)         --------->ANAC55(2)                --------
                       ------->TEIL       --------->YAB1 <---------ANAC55(2)          <---------GLK1(2)
                    --------->ANAC58     <---------AHL20(2)                   ------>ZmHOX2a(1)  <--
                    --------->ANAC58    <---------AHL20(2)    <---------AHL20(2) ------>ZmHOX2a(1)
                    --------->ANAC46    --------->AHL20(2)    --------->AHL20(2) --------->HSFB2a(2)
-------GLK1(2)    <-----------GT1 <---------DAG2   <-------TEIL<---------AHL20(2)<---------HSFB2a(2)
 
aattctccgatttgatcaatttcacgaattttgcgcccttttttttaataaagtttcatcacttattaatttgtctaattcctcctagagattccccctg  6008800
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AGI:  At1g17480.1   
Description:  IQD7 (IQ-domain 7); calmodulin binding. similar to IQD8 (IQ-domain 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G72670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43806.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048)
Range:  from: 6006454    to: 6008259    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g17490.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72690.1); similar to unknown [Populus trichocarpa] (GB:ABK95773.1)
Range:  from: 6008582    to: 6009413    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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