Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                       --------->At4g35610                                                                              <-----------GT1   <----                                       <-----------GT1                      <---------AHL20(2)  -----                                <---------DAG2                        <---------DAG2   <---------At4g35610                                <----------DOF2                       <----------DOF2--------->YAB1           ---------->DOF2   --------->ZAT6    <----------DOF2    ------->GAMYB   --------->WOX13(1)     --------->YAB1        <-----------GT1 ------>ZmHOX2a(1)     <---------MYB52(2) <---------ATHB12    <---------YAB1     <----------DOF2<-----------GT1            <------------MYB.PH3(2) <----------DOF2   tcaactatcattctaaagtcatacccttttaacactttatttatcctctcttttttttttttggacaactaactttattttatccaatcagcttttaaaa  5977000                                                        ------->TEIL                                                     --------->ANAC58                                                     --------->ANAC58                                                --------->ANAC58                                                --------->ANAC55(1)                                                <---------ANAC55(2)                                      --------->ZAT6 <---------ANAC46                           -----                                    --------->YAB1   --------->O2    <---------ARR14(2)        ------                                    -------->HAHB4   <---------ANAC55(2) ------>ZmHOX2a(1)    -------     <-----------GT1               --------->ICU4   ------>NtERF2    ------->TEIL    <---------ANAC46 ------>YAB1<---------ANAC46     --------->YAB1 --------->ANAC58     --------->ARR14(2)   --------->AHL20(2) ------>TOE2(3)               ----------->GT1   --------->ANAC46    <---------CCA1(2)<---------ANAC55(2) -----ARR11(3)           --------->ANAC58   --------->YAB1        <---------ANAC55(2)--------->ANAC55(2) ---->ARR11(3)           --------->ANAC58  <---------YAB1      --------->ANAC46   <---------REM1(2)   tcttaattaacatggtttggattggacaagctaagtaataatactataatacgccacgtatatatacgacgtatccttcttctcttcacgtataaaataa  5977100                       <---------ANAC46                                     --------->YAB1                       --------->ANAC55(2)                              <---------YAB1                       <---------ANAC58                          ----------->GT1                       <---------ANAC55(1)                      --------->DAG2                       <---------ANAC55(2)            --------->YAB1 <---------YAB1   <---------ANAC46    <---------ANAC58      ---------->DOF2  ---------->DOF2 ---->AHL20(2)        <-------TEIL       ---------->DOF2   <---------YAB1<---------ICU4 --->YAB1           --------->TOE1(2)  <---------AHL20(2)--------->YAB1 --------->ICU4 -->AHL20(2)        --------->TOE2(2) --------->AHL20(2)<---------YAB1--------->YAB1   aaatagtgtgttattgccataacatacgtgttttctaaaatttaaaagaaagtcatttatcatgaaaaggtatcataatcagaataagagtaatcagttt  5977200                                    <----------DOF2                                 --------->ARR11(3)                         <----------ID1                                 --------->AHL20(1)                         ----------->GT1            >>>>>>>>>>WRKY6      <---------ARR11(3)                      ---------->DOF2            >>>>>>>>>>WRKY11     <---------AHL20(1)                    <---------AHL20(2)           --------->WRKY45     --------->RVE1(1)  --------->ALFIN1  <---------------AGL15           --------->WRKY38(1)  --------->CCA1(1) ------->MYC3     --------->AHL20(2)            <---           --------->WRKY12 >>>>>>>>>>GT-3b       <-------MYC3<-----------GT1              <---------ICU4     --------->STY1(2)   ----------->GT1<---------ANAC58   <---------ARR14(2)          --------->AHL20(2)     <---------STY1(2) ---------->DOF2  <---------ANAC58   --------->ARR14(2)     --------->AHL20(2)   gaaaactagctagttgactaaaacagaaagaaaaatatctttacttgaaacatgtgttgagaattcacattatataaaaggaaaaaaaataaaacatgac  5977300                                        --------->ANAC58                                        <---------DEAR3(1)                                     --------->ZAT18                                    --------->ALFIN1                                  --------->ALFIN1                        --------->YAB1  --------->ANAC58          --------->ANAC58       ------->MYC3          --------->ANAC58       <-------MYC3                            --------->ARR11(3)       ------------>CBF--------->MYB46(3) <------NtERF2                  <---------ARR11(3)  <---------ANAC58     <---------ATHB12--------->SPL7                   <---------CCA1(2)  <---------ANAC58    --------->ANAC46 <---------ORA47(1)             --------->AHL20(2)  <---------ANAC46   --------->WOX13(1)--------->RAP2.6(3)            <---------AHL20(2) -------DOF2       ------------>CBF--------->REM1(2)                <-----------TBP          <-------   ttttgcgtagacaatccatagtccaatcaacaaaacgtgtggacggcaagggttccttctagctctctctatttatatctctcactcgccgatttttact  5977400                                 ------>ZmHOX2a(1)                             <---------ARR14(2)                          --------->MYB46(3)                                          <---------AHL20(2)                         ------>MYB83                                                --------->AHL20(1)                         ------>MYB46(1)                                             <---------AHL20(1)                      --------->MYB46(3)                                             --------->AHL20(2)                  --------->At4g35610        <<<<<<<<<TBF1                     ----------->GT1                  <---------At4g35610    ------>ZmHOX2a(1)                     --------->YAB1    <-----------GT1  -------->P --------->TOE2(3)                      --------->TOE2(3)         ----    *TSS       <-------TEIL  --------->ARR14(2)                  --------->ANAC46    <---------AHL20(2) ----GT1    <---------HSFB2a(1) --------->TOE1(3)    --------->YAB1    --------->TOE1(3)    <--------   agtaattaaccagaacgttcatctaccaacaaatcctcaactccttcttcttcactaatagtataccacaaaacctcaaaattgtaatttattagattat  5977500                                                                      --------->ATERF1(1)                                                                      <------NtERF2                                                                     <---------ATERF1(1)                                                                     <-----------HVH21                                                                     ------>NtERF2                                                                    --------->DEAR3(1)                                                                    <---------DEAR3(1)                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                  <---------ATERF1(1)                                                                  <---------ORA47(2)                                                                  ------>NtERF2                                                                  <---------RAP2.3(1)                                                                  <---------DEAR3(2)                                                                 <---------DEAR3(1)                                                              <---------TGA1a                                                              --------->O2                       <---                                                              --------->TGA1a                  <-----                                            ============================bZIP_DOF               <-----          --------->At4g35610               ---------->DOF2   <---------O2              --------->ZAT18 ----->YAB1  ---------->DOF2        --------->YAB1     --------->ANAC55(2)             ============== -GLK1(2) <---------At4g35610    ------>ZmHOX2a(1)     <---------ANAC55(2)             <------ZmHOX2a(1)   cgtgatggccttagctaaagagttaatgggttatcctctcatcacagaaaggtcatcacttgtctcgtcggcgtcgcatttcaagaagaggacacagtca  5977600                                                      <-------GAMYB                                                     <---------DEAR3(1)                                                     <---------MYB46(3)                                                    <------NtERF2                                                   <-----------HVH21                                                   ------>NtERF2                                                  <---------ANAC46                     <---------WRKY18(1)        --------->LBD16              ----------->GT1                    ----------->HVH21         <---------LBD16                <------MYB46(1)          <------ZmHOX2a(2)                 <---------ARR14(2)               <------MYB83 <---------ANAC58      --------->HSFB2a(2)                   --------->ARR14(2)              --------->MYB59       ---      <---------HSFB2a(2)--------->LBD16   ------>MYB46(1)               --------->ARR14(2)       --- ------REM1(2)      --------->WRKY38(1)    ------>MYB83        <-----------HVH21          <---------ANAC46 ----WRKY12  -------->P<---------LBD16  ----------------->AG------>NtERF2<---------ARR14(2)    <----- ----WRKY38(1)   <----------DOF2 --------->ANAC58 --------->DEAR3(1)    <------ZmHOX2a(1) <---------ANAC58 ================HOX2a_HOX2a     --------->ANAC58 <---------DEAR3(1)   ----------->ARR10 ------>NtERF2   acacagttctcgatcaacccttttgaccggagaccaagaaaaaccaaatccggcgtcgttgcagccatcagcgaggatttggtcaaaacgctgcgttttt  5977700                                            <------NtERF2                                            --------->At5g28300                                           <---------MYB46(3)                                          <---------ANAC46                                          <---------DEAR3(1)                                         <---------ABI4(1)        --------->LBD16                  <------NtERF2     --------->MYB52(1)                 <---------RAP2.3(1)              <---------ZAT6    ------->GAMYB                       <---------DEAR4(2)          <-------GAMYB   --------->MYB46(3)                  <---------RAP2.3(2)         <---------MYB46(3)   <---------MYB52(2)                  <---------DEAR3(1)         <---------AtMYB61   <---------MYB55(2)               --------->DAG2            <---------ZAT2 ------>ANAC46                     ---------->DOF2            <---------At4g35610               <---- ------>HSFB2a(2)            <------ZmHOX2a(1)                --------->At4g35610              <----- ------GT1      ---------->DOF2 <------ZmHOX2a(1)             --------->ZAT2   <------ZmHOX2a(1)-----   ccacaacgaccggagacagaaagagcgaagaggaggagaaagcggcggtgaagttcaaggtgagagctgtggttactgtgaggaacaagaacaaggagga  5977800                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                              --------->MYB46(3)                                                                              <---------MYB55(2)                                                                             --------->ANAC46                                                                             --------->ANAC58                                         <---------AHL20(2)                <---------ALFIN1--------->ANAC46        --------->GLK1(2)               --------->AHL20(2)                --------->At4g35610 ---------->DOF2                  <---------At4g35610                     <---------At4g35610 -----ARR14(2)                <----------DOF2                           --------->YAB1  ------>ZmHOX2a(2) -ZmHOX2a(1)                 <---------ANAC58                     <---------At4g35610   ============= ---->ARR14(2)               <---------ANAC58               <---------ANAC46 --------->ANAC58       -   tttgaaagagactcttgttaagcatttggatgcttttgctgataaaattggtcgaaacattgtcttggagcttatcagcacccaacttgatccaagtaag  5977900  Previous    Next  AGI:  At1g17420.1    Description:  LOX3 (Lipoxygenase 3); iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen. similar to lipoxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G67560.1); similar to lipoxygenase, putative [Arabidopsis thaliana] (TAIR:AT1G72520.1); similar to LOX2 (LIPOXYGENASE 2) [Arabidopsis thaliana] (TAIR:AT3G45140.1); similar to lipoxygenase [Nicotiana attenuata] (GB:AAP83138.1); similar to lipoxygenase [Sesbania rostrata] (GB:CAC43237.1); similar to 13-lipoxygenase [Solanum tuberosum] (GB:CAA65269.1); contains InterPro domain Lipase/l Range:  from: 5977404    to: 5981473    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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