Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------AHL20(2)                                                        --------->AHL20(2)                                                        <XXXXXXXXXXXXXXXXXXXXXMIR845B                          --------->ANAC58             --------->AHL20(2)                          --------->ANAC58         --------->ICU4             --------->AHL20(1)                   ----------->GT1             <---------AHL20(2)               --------->LBD16             --------->AHL20(2)               --------->HSFB2a(2)     ----------->GT1      --------->ANAC46    <---------HSFB2a(2) ------>TOE1(3)       --------->ANAC58       <---------LBD16 ------>TOE2(3)       --------->ANAC58      <---------LBD16      <-------TEIL                 <------ --ATHB12   --------->AHL20(2)          <-------TEIL   <---------AHL20(2)            <---------YAB1   ccctaatcggtgaaaaaaattggaaggcaagcaactacaagattcatccgggaagtattaatttagattcagagcgagagagaagttatcaattggattg  5969600                             <---------ZAT14              <-------TEIL   --------->ZAT18             <------ZmHOX2a(2)                                      <------ZmHOX2a(1)            --------->AGP1   --------->ZAT14           --------->KAN4(1)            --------->ARR14(2)                        <---------KAN4(2)           --------->At4g35610                --------->DAG2      <---------TOE2(3)     <---------GLK1(2) ---WOX13(1)<---------ARR14(2)        --------->MYB52(1)   --------->YAB1           -----------------   aaactcaactctcagatccattgcaattgagttcacagacaaaccgataaggtcggattattcatactaaggaaaacaatagaacccctagaatttctcg  5969700            <------NtERF2           ------>NtERF2           ----------->RAV1(1)          --------->DEAR3(1)          ----------->HVH21         --------->RAP2.3(1)        <---------ATERF1(1)      --------->DEAR3(2)   ----------->HVH21 <---------TGA1a ======================RAV                                                      --------->LBD16 <---------O2                                                               <---------WRKY18(1) <---------At4g35610                                                       ----------->HVH21 --------->At4g35610                                                     <---------ANAC58 <---------ZAT2                                                          >>>>>>>>>>WRKY18 --------->O2                                                            <---------ANAC58 --------->ZAT2                                                   <<<<<<<GRF7 <---------LBD16 --------->TGA1a                        <------ZmHOX2a(1)       ----------->HVH21                  -- --------->ANAC55(2)                 <------ZmHOX2a(1)          ------>ZmHOX2a(1)          <---------ARR14(2) ----------->RAV1(2)               --------->ALFIN1    <---------ANAC55(2) --------->WRKY38(1)     -- ---->WRI1<---------ETT(2)        <------ZmHOX2a(1)    --------->ANAC55(2) --------->WRKY12--------->ARR14(2)   ctcacctgaccggcgacaaggagacagaggcgagaaggaggaggaacaatatttgatatgtgattcctgacattgacttgaccggagaacacaaattcgg  5969800                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                   <------ZmHOX2a(1)                               <-                                       <---------YAB1                                             <--   ------>MYB83                --------->LBD16    ----------->GT1                                ----   <-----------HVH21          --------->LBD16   <------NtERF2                   <------NtERF2------>ZmHOX2a(1)   ------>MYB46(1)          ------->GAMYB    <---------LBD16                  <---------ANAC46  -----   --------->MYB52(1)   ----------->HVH21---------->DOF2                   <-----------RAV1(1)------- ------->ANAC58  <------ZmHOX2a(1)  <---------AHL20(2)                     ========================== ------->ANAC58--------->MYB59--------->ANAC46 --------->LBD16       --------->GLK1(2)      <--------   caacctatcagacgaattaggacgatgtaaccccgaaatttatgaaagccggaggaaaattgtgttcggagaagctaatgtcgtcgagtttgctcctcct  5969900 <------NtERF2 -------->LBD16 ------->LBD16 ------->ATERF1(2) ------->RAP2.6(2) --------HSFB2a(2)                                            --------->TOE2(3) --------ANAC46                                     <---------ARR14(2) ------->HSFB2a(2)                                  ------->TEIL --------ATERF1(2)                                  <---------ARR11(1)          --------->ICU4 -------LBD16                                       --------->GLK1(2)      --------->ANAC46 ----->MYB52(1)                                     --------->ARR14(2)     --------->ANAC58         < ->ZmHOX2a(1)                          ----------->GT1     --------->YAB1  --------->ANAC58         - ---->RAV1(2)           <---------TOE2(3)          <---------CCA1(2)*TSS ---------->DOF2           -- =====RAV              <---------DOF5.7(2)         <---------GLK1(2)<---------AHL20(2)           ---- -ALFIN1    ---------->DOF2        ---------->DOF2 <---------ARR14(1)   --------->YAB1         ------   gccggaaaactctgaaacgcgcgtttaacgtcgacttaaaagggctaaaacccgaatcttataatcttatataatcaaagccatttttgacaaaaaaaaa  5970000           <---------AHL20(2)          --------->AHL20(1)          <---------AHL20(1)         <---------AHL20(2)       --------->AHL20(2)       <---------AHL20(2)       <-----------TBP     <-----------TBP     --------->AHL20(2)     <---------AHL20(2)   --------->AHL20(2)   <-----------TBP   <---------AHL20(2) --------->AHL20(2)                                                       <---------MYB52(1) ----------->TBP                                                  <---------ICU4 ---------AHL20(1)                                           <---------WOX13(1) -------->AHL20(1)            --------->YAB1                <------------CBF ------->AHL20(2)            <---------ATHB12  <---------AHL20(1) --------->YAB1 ----->AHL20(2)  <---------TOE2(3)             --------->AHL20(1)<---------YAB1      <----------ID1 --->AHL20(2)  <---------AHL20(2)           --------->AHL20(2) --------->YAB1    <---------ZAT14    <   aatatatatatatatatttaagtttgggcctatcaacatttttaaaaaaaatattagggcccgattgataataactgttaggctgtagagacaaacactc  5970100             <---------AHL20(2)           <---------AHL20(2)          <---------AHL20(1)                             ----------->GT1          --------->AHL20(1)                             <------MYB83                   --------->YAB1        <---------AHL20(2)                    --------->AHL20(2)            --------->AHL20(1)       --------->AHL20(2)                 --------->AHL20(2)                <---------AHL20(2)      <---------YAB1          --------->AHL20(2)         <------MYB46(1)    <---------AHL20(1)   <---------AHL20(2)        <---------AHL20(2)         --------->MYB59     --------->AHL20(2)   <---------YAB1            --------->AHL20(2)         --------->MYB46(2) --------->AHL20(2)  <---------AHL20(2)     --------->AHL20(2)   <---------AHL20(2)           <---------AHL20(2) ---------YAB1 <---------AHL20(2)   <---------YAB1  <---------YAB1 <----------ID1----------->GT1   ttatttttattatatatttttttttaaaaatataaattatgctaaaaaataaatatgtttggtaatataggggcaaaataaatttgttaataagaaagtt  5970200                                                                                                  ---                                                                                                  <--                                                                                                -----                                                                                                <----                                                                                          <------MYB83                                                                                          -----------                 <---------------AGL15                                                    <------MYB46(1)               --------->YAB1             <---------ICU4                           <-------TEIL------              <-------TEIL                --------->AHL20(2)       --------->AHL20(2)    --------->MYB59         <---------AHL20(2)              --------->AHL20(2)<----------ID1         --------->CCA1(2)         --------->AHL20(2)        ----------->GT1       ---------->DOF2         --------->ARR11(1)    <---------AHL20(2)           <---------ZAT14      --------->AHL20(2)         --------->ARR11(3)    --------->AHL20(2)           --------->ZAT14 <---------At4g35610    --------->YAB1 <---------MYB52(1)   --------->AHL20(2) ---------->DOF2    <---------AHL20(2)----------->GT1   ---------->DOF2   <-----   ttcaaaaaaatttaaattcataaataaagaaatactgtagtaaataatttcagcaaataaaaagaaaaaaaaaatcatataaagatacagtttggttatt  5970300                                                                     <---------------AtSPL8   <---------AHL20(2)      <---------------AtSPL3                 --------->ARR11(3)           <-----  <---------AHL20(2)    <---------ARR11(3)                        <---------ARR14(2)           <-----  --------->AHL20(2)    --------->ARR11(3)                        --------->ARR14(2)          ------- <---------YAB1    ------>MYB46(1)                                <---------ARR11(3)          <------ ------>ICU4       ------>MYB83                             --------->ZAT14                   <------ -------YAB1       -------->P                               <---------ZAT14                   ------- ---->YAB1       ------->GAMYB                           <---------ANAC58                    -------- -----ICU4      --------->MYB46(3)                       <---------ANAC58                   --------- >GT1         <-----------GT1    <---------MYB59         <---------ANAC46                 ---------->DOF2 --->ICU4<---------AHL20(2)--------------->AtSPL8       <---------------AtSPL8          <------NtERF2 ----YAB1--------->AHL20(2)<---------------AtSPL8       --------------->AtSPL3         ------>NtERF2   attattaatttttaattaaccaactagatattgtacttaactaaaacgtctcactgatttcgtacacagatattgtacatcgattacgctggcaaagata  5970400                                                                                           <---------MYB52(1)                                                                                          <---------RAP2.6(3)                                                                                          --------->At5g28300 ----RVE1(1)                                                                             ----------->GT1 ----CCA1(1)                                                                             --------->RAP2.6(2) -->ARR11(3)                                                                       --------->ALFIN1 - ---ARR11(3)                                                  ----------->GT1     --------->ARR11(3)< ---AHL20(1)                                                ---------->DOF2     <---------TOE1(3)  -- -->AHL20(1)                                     <-----------GT1            ------>ZmHOX2a(2)      -- ->YAB1                                      --------->ARR11(3)           --------->ARR11(3)     <--- -->ARR10      <----------DOF2     <---------GLK1(1)     ----------->GT1  <---------ARR11(3)    <----   tttttagttagaaaatgcttttatggctaaaacatggaaatgtggatgattttgccaaatggtaaagataaaacatgatcttaaggtctggccgtaaatt  5970500  Previous    Next  AGI:  At1g17410.1    Description:  nucleoside diphosphate kinase family protein. similar to NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2), ATP binding / nucleoside diphosphate kinase [Arabidopsis thaliana] (TAIR:AT5G63310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77593.1); similar to Os02g0565100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047164.1); contains InterPro domain Nucleoside diphosphate kinase, core; (InterPro:IPR001564) Range:  from: 5968566    to: 5969968    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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