Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->YAB1        <---------ICU4                                                            --------->ATHB12      --------->ARR11(3)                            --------->AHL20(2)           ====================  --------->YAB1                                    <---------ARR11(3)           ================HOX2a_HOX2a ------->TOE2(3)                                  --------->ANAC58               <---------YAB1 ------->YAB1                                     --------->ANAC58               <------ZmHOX2a(2) -----DOF5.7(2)                          --------->MYB46(3)                 ========================= ----WRKY45                  ------->GAMYB--------->ANAC46               ============================ ----WRKY12    --------->ZAT18          --------->ANAC46       --------->ANAC58 --------->ARR11(3) ----WRKY38(1) ----------->HVH21        --------->ANAC58       --------->ANAC58 <---------ARR11(3) -->WRKY18(1)--------->At4g35610        --------->ANAC58 ---------->DOF2 <----------DOF2  ------>ZmHOX2a(1) ----HVH21   <---------At4g35610      <---------ALFIN1  --------->AHL20(2)  ---------->DOF2   acgataaaaatcatgagctcacagactccaacgctctctcacacccatcaccaagaaattaaagcaaacaatacactttaaagatcattgtcctgaatca  5890900                <---------ANAC58                <---------ANAC58                <---------ANAC46            ------->MYC3            <-------MYC2            <-------MYC3            ------->MYC2           --------->TGA1a           <---------O2           --------->ANAC55(2)               ------->GAMYB           <---------ANAC58                 <---------MYB111(2)           ==========================================MYC_MYB           --------->O2                     <---------MYB52(2)           <---------TGA1a                  <---------MYB55(2)                                      -           <---------ANAC58                 --------->MYB46(3)                                     <-           <---------ANAC55(2)            ----------->RAV1(1)                                     <--         <-----------GT1             <---------SPL7                                               <--    =================bZIP_DOF        <-----------HVH21                                            ---    ------>ZmHOX2a(1)               --------->DEAR3(1)  ------>ZmHOX2a(1)       --------->LBD16  ====    <----------DOF2         <---------ARR14(2)      --------->ARR14(2)        ------->GAMYB      <--- ==========HOX2a_HOX2a      --------->ARR14(2)  --------->YAB1              --------->ANAC58   <----- ====================bZIP_DOF    <---------ALFIN1   <---------ARR14(2)      --------->ANAC58 -------- ====================bZIP_DOF   ------>ZmHOX2a(1)   <---------ARR11(3)  <-----------GT1--------->ZAT6   tccatcctttttcacgtgtcgtcttcatcaaatcctcaccgtcccaacaaacaaaatcctctgttttcttctattgacaacccagagaaacactataaag  5891000                                          ------->MYC2                                          <-------MYC2                                          <-------MYC3                                          ------->MYC3                                         --------->O2                                         --------->ANAC55(2)                                         --------->TGA1a          <---------YAB1                 <---------TGA1a   ----------->RAV1(1)                   <---------ANAC55(2) ----->ZmHOX2a(2)      --------------->AtSPL8 -----ZmHOX2a(2)       --------------->AtSPL3      <-----------GT1 -------ARR14(2)       ------>ZmHOX2a(2) --------->ANAC58 -------ARR11(3)     ------->TEIL        --------->ANAC58                           --------->ARR14(2) ------>ARR14(2)     <---------ARR14(2)  <---------O2                    <---------YAB1 =============================HOX2a_HOX2a--------->ANAC46     <---------ZAT2        <---------ARR14(2) ---ZmHOX2a(1)       --------->ARR14(2)<---------ALFIN1       --------->ZAT2   ------->TEIL---------- ----TOE2(3)         <---------AGP1    <------------OsbHLH66  --------->At4g35610  ------>MYB46(1) -->DOF2 --------->AHL20(2)          <---------ALFIN1         <---------At4g35610  ------>MYB83 -----   gatcccaacatttttattcaatggatctgtactacaaacccacacgtgatttgaaaccacttgcagctcaaaaatatgatgaaccaaatcggagaaagag  5891100                                                                                                   --           ---------->DOF2                                                                     ------       <---------ETT(2)                                                                 <---------ANAC58       --------->ETT(2)                                                                 <---------ANAC58    <---------ANAC46            --------->WRKY12            <----------DOF2             --------->TOE2(3) >DOF2<------NtERF2             --------->WRKY38(1)      --------->ARR11(3)    <---------ARR14(2) --- ---->CCA1(2)       --------->AHL20(2) <---------YAB1    <---------ARR11(3)    --------->ARR14(2)<---   acgatgtcgtcgacaaagagaattaaaaacagagttgacttattgtagagacagagagagacctttccaaagtgttttgcagatagtcttccttgatcaa  5891200                                                                  --------->ZAT18                                                             ----------->HVH21                                                            <-----------HVH21                                                           <---------ANAC58                                                           <---------ANAC46         <----------DOF2                     <-----------GT1--------->LBD16                    <----- -------->DOF2                           <----------DOF2   <---------ANAC55(2)    <---------ANAC58 --->WOX13(1)                        <-----------GT1       <---------ANAC55(1)    <---------ANAC58 ------>YAB1          ------------>CBF  <---------DAG2     --------->ANAC55(2)<---------HSFC1(2) ------ATHB12 <-----------GT1    <----------DOF2           <---------ANAC58   --------->HSFC1(2)   tcaaagtcagtcttttttgcccatctcaatctcatctttttaccttttaaccaaaaccattccgtgactgcccaaatcgacgtttcgtttcgccattctt  5891300                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                             --------->CCA1(2)                                                                             --------->GLK1(1)                                                                             <---------GLK1(1)                                                                            --------->ARR14(2)                             <------ZmHOX2a(2)           ----------->GT1   <------ZmHOX2a(1) -------- -----DOF2       *TSS    <---------At4g35610   ---------->DOF2--------->ICU4<---------ARR14(2)   <---   ttttttttttttttttcatatgtgttcagcgatcactctgtgttcttaccaaagctaacttgtaaaaatgagagggaggatatgtttcttggcaatagtg  5891400                                 ------>ZmHOX2a(1)                                --------->TOE1(3)                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                             --------->ARR11(3)                             <---------ARR11(3)                             --------->ARR14(2)                             ------>ZmHOX2a(1)                             <---------ARR14(2)           --------->HSFB2a(2)                 --------->REM1(1)              <---------ANAC58           --------->TOE2(3)               =======================HOX2a_HOX2a         <---------HSFB2a(2)               ------>ZmHOX2a(1)--------->TOE2(3)        <---------LBD16   --------->TOE1(3) ->YAB1 <----------DOF2    ----------->ARR10    <---------ANAC46       <----------DOF2            --- ------GLK1(2) ======================HOX2a_HOX2a<---------ANAC58  ---------->DOF2                 ---   attctctgttctttctccttcatcttagtaagatccttaaacgaagaagggcgtgttcttctggagtttaaagctttccttaatgactccaatggctatc  5891500                                                     ------->TEIL                                                   --------->REM1(2)                                                  --------->ALFIN1                                                <---------ANAC58                                                <---------ANAC58                                           <---------ARR14(2)             --------->At4g35610           <---------GLK1(2)   --------->ZAT2                          --------->ARR14(2)   <---------ZAT2                        --------->LBD16                     <-------GAMYB   --------->At4g35610                 <---------LBD16                      <-----------RAV1(1)    -- ------>ANAC58               --------->ANAC46   <---------ANAC55(2) --------->At5g28300         ----- ------>ANAC58               --------->AtLEC2   <---------ANAC46   ----------->GT1 ------>ZmHOX2a(2)<   tcgcaagctggaatcagttggattcaaatccctgcaactggaccggaatcgcgtgtacccatctcagaactgtaacttctgttgatctaaatgggatgaa  5891600       <-------TEIL       --------->ZAT18                                           ------>MYB46(1)       <---------ZAT18                                           ------>MYB83       --------->ZAT14                                         --------->AtMYB61   --------------->AtSPL8                  <---------TOE2(3)   --------->MYB46(3)   <---------------AtSPL8        <-------TEIL                  <---------MYB111(1) ------->WOX13(1)            --------->ANAC58                  <---------ALFIN1                 <---- -->TEIL                     --------->ANAC58<------ZmHOX2a(1) <---------MYB111(2)          <-------- -----------HVH21 ------>ZmHOX2a(1)        <---------TOE1(3)  --------->MYB46(3)            ---------   tctatcaggtacactatctcctctcatatgcaagcttcatggtttaaggaaattgaatgtctccaccaacttcatctctggtccaatccctcaagattta  5891700                                                                             <---------ICU4                                                                             --------->YAB1                               <---------ZAT18                              <---------YAB1                               <---------ZAT14                             <---------ARR11(3)                               --------->ZAT14                             --------->ARR11(3)                           ------>ZmHOX2a(2)                              --------->YAB1                          <---------GLK1(1)                              --------->ICU4                         <---------ARR11(3)         <---------ZAT6       <---------YAB1                    <-------TEIL                  <---------ANAC58     --------->YAB1                   --------->GLK1(2)              <---------ANAC46  --------->MYB52(1)           ---- -------GT1        --------->ARR14(2)             <---------ANAC58<---------MYB52(2)            <---- -ARR11(3)         <---------ARR14(2)        <---------AtLEC2    <---------At4g35610        --------- >ARR11(3)         --------->ARR11(3)        <---------ANAC46    --------->At4g35610       --------->GLK1(2)   tctctctgtcgaagtctagaggttcttgatctctgcacaaataggttccatggagtgataccaattcagctaaccatgatcatcactcttaagaagctgt  5891800  Previous    Next  AGI:  At1g17230.1    Description:  protein binding / protein kinase. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT2G33170.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G63930.1); similar to hypothetical protein OsI_024031 [Oryza sativa (indica cultivar-group)] (GB:EAZ02799.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70971.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15257.1); contains InterPro domain Serine/threonine p Range:  from: 5891317    to: 5895068    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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