Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->HSFC1(2)                                                                  <---------At4g35610                                                                  --------->HSFB2a(1)                                                                  <---------HSFC1(2)                                                                  <---------HSFB2a(1)                                                                  --------->At4g35610                                                                  --------->ZAT2            <----------DOF2       <---------CCA1(2)         ------>ZmHOX2a(2)           <---------DAG2     ------>NtERF2           --------->At4g35610          <----------DOF2    ------>ZmHOX2a(1)         --------->LBD16         <---------At4g35610      <---------MYB52(1)   <---------ALFIN1     <---------ZAT2                ------>NtERF2           <-----------HVH21 ------>ANAC58          --------->ZAT2             <---------At4g35610    <---------ALFIN1 ------>ANAC58          <---------At4g35610       <-----------RAV1(1)    --------->MYB46(3) --->ARR14(2)     <-----------HVH21      --------->ANAC46 --------->ARR11(3) --------->DEAR3(1) ----ARR14(2)    <----------DOF2 <---------SPL7 ----------->RAV1(2)     ------>ZmHOX2a(1) ->LBD16<-----------GT1 --------->At4g35610 <---------ALFIN1===================HOX2a_HOX2a     ------   acgctcctcttcaccttttctttcacagcttccgccgtatcactcaccacttctgccgctgatctagcagcttcctccaccgtcgctttgctatgctcaa  5765200                --------------------->WRI1            <------NtERF2           --------->ABI4(1)           ------>NtERF2           <---------ATERF1(1)          --------->DEAR3(1)          --------->RAP2.6(2)          <---------ATERF1(2)          --------->RAP2.3(3)          --------->RAP2.3(2)         --------->RAP2.3(1)         --------->DEAR4(2)         --------->ORA47(2)         <------NtERF2         --------->ATERF1(1)         --------->ERF1        ------>NtERF2        <---------RAP2.3(1)        <---------ATERF1(1)       --------->DEAR3(1)       <---------DEAR3(1)               <---------DEAR3(1) --------->At5g28300         --------->AHL20(2)     <-----------HVH21          --------->ZAT2            --------->LBD16              <---------AHL20(2)    --------->ANAC46          --------->DEAR3(1)          ----------->GT1             --------->AHL20(2)    --------->O2<----------DOF2<---------ATERF1(1)       --------->HSFB2a(2)     <------ZmHOX2a(1)   ------>ZmHOX2a(1)         <---------LBD16            <---------LBD16   --------->DAG2  <---------ALFIN1 --------->YAB1 ------>NtERF2      <----------DOF2     ---------->DOF2 ---->DOF2--------->ANAC46 <-----------GT1  ------>NtERF2<---------HSFB2a(2)    ----------->GT1   agctcctcgtcgccgcctctttcatattttcaccggctcccatcggcgcatcattctttccggtaaaactattcaaaaagagaggaaatttaaaaacaaa  5765300                                     --------->ANAC58                                     ------>MYB83                                     --------->AtLEC2                                     --------->ANAC58                                     --------->ANAC46                                ------>NtERF2                               ----------->HVH21                               --------->LBD16                               <---------ETT(1)                               --------->DEAR3(1)                                                  <-                              --------->LBD16                                                     ---      <-------GAMYB       <---------GLK1(1)     <---------ANAC46                    --------->ALFIN1   <---------ANAC58      <---------GLK1(2)--------->ICU4                     ---------->DOF2    -----   <---------ANAC58      --------->ARR14(2)--------->ATHB12                 <------ZmHOX2a(1)<-------   <---------ANAC46  ---------->DOF2 ------>MYB46(1)                        =========================   aaatggctcgttgagttcaaaacaaaagattccccgaccaagcaaagattgagtatatatacttactatgtgttcggaggaaagaagtgggactgtccac  5765400                                       --------->SPL7                                     ----------->HVH21                                     <---------SPL7                                   <---------LBD16                              <---------ICU4                             --------->ICU4                           --------->ATHB51                           <--------ATHB1                                                          --                           --------->YAB1                                                   ---------                           --------->AHL20(2)                                              <---------ALFIN1                           <---------AHL20(1)                                              --------->DEAR3(1)                           <---------ICU4                                                 <------NtERF2 -----ZmHOX2a(2)          --------->ICU4                                                 ------>NtERF2 ------>ARR14(2)          <---------ATHB12                                             <---------ABI4(2) ---->ANAC46    <----------DOF2   <---------At5g28300                              --------->At4g35610 --ETT(2)       --------->TOE2(3)<-----------GT1                     <------NtERF2 <---------At4g35610 =====HOX2a_HOX2a         <---------ATHB51 <---------MYB52(1)--------->MYB52(1)  <-----------RAV1(2)   gatccaaagtctctctaactttagcccaataatttttaccggaccgtttgattttagttagccaaacagtcgtcgttttatcttcagatggcaccgctct  5765500                                                           <---------ARR14(2)                                                           --------->GLK1(2)                                                           <---------KAN4(2)                                                           ---------->TaMYB80               --------->RAP2.6(2)                     --------->HSFB2a(2)             <---------At4g35610                     <------ZmHOX2a(2)          --------->At4g35610                       <---------ARR11(3)                          <----   --------->GLK1(2)                      <------ZmHOX2a(1)--------->ARR14(2)                   <----  <---------GLK1(2)         --------->YAB1==================HOX2a_HOX2a ----------->GT1      <------- ------->YAB1--------->At4g35610    ---------->DOF2 --------->ARR11(3) ----------->GT1     <--------- >ZAT14   <---------At4g35610    --------->ZAT6 ---------->DOF2 --------->YAB1     <---------WRKY18(1)   ctcagaatcgacatcagccgaaacattcactgataacacaaagaggaagaaaaagatcgagaatatgcataataggttaaaaacttgaccagactttact  5765600                                             --------->CCA1(2)                                            *TSS                                  <---------TOE2(3)                                <---------AHL20(2)                               --------->AHL20(2)        <------ZmHOX2a(1)     ------->MYC3 ------DOF2                 --------->AHL20(2)    <---------YAB1               <-------MYC3 -----DAG2          <----------DOF2       ----------->ARR10   ------->TEIL  --------->ANAC46 ----GT1    <---------TOE2(3)  <---------AHL20(2)<---------ANAC58      <---------ARR14(2) -DOF2 --------->ICU4       <---------AHL20(2)   <---------ANAC58      --------->ARR14(2)    --------   ttttcagccattttgatgttttctttgttttaaattaatgtggtaagagatgcttattaggatgaaacttacatatacacacatgtttgagtttgcaaag  5765700                                       <-------PIF4                                       ------->PIF4                                       <-------MYC3                                       <-------PIF5                                       ------->MYC3                                       <-------MYC4                                       ------->MYC4                                       ------->PIF5                                               <--                                       ------->MYC2                                             -----                                       <-------MYC2                                            ------                                      <---------O2                                             <-----                                      --------->O2                                            -------                                      <---------TGA1a                                         <------MYB83                                      --------->TGA1a                                         <------MYB46(1)               ---------->DOF2        --------->ANAC55(2)                                     -------               =================================bZIP_DOF                                      <------            --------->At4g35610       <---------ANAC55(2)      --------->ANAC58          --------->ALFIN1            <------NtERF2  <------NtERF2                 --------->At5g28300             ----------->HVH21            <---------At4g35610      ------------>OsbHLH66     <----------ID1 <---------O2   --------          <---------DEAR3(1)        <------------OsbHLH66--------->LBD16      <---------ANAC46<------         <---------At4g35610       <---------ZAT18      ----------->GT1       <---------TGA1a--------         <------NtERF2    <---------MYB46(3)          ------->TEIL            --------->TGA1a<-------         --------->At4g35610<---------PCF2       <---------ANAC46             --------->O2 <------NtERF2       <---------DEAR3(1)--------->ALFIN1        <---------ANAC58          ----------->HVH21<--------      --------->RAP2.6(3)<---------ANAC46   --------->HSFB2a(2)--------->ANAC58        <---------bZIP60(2) -->DOF2 --------->ATERF1(1)----------->HVH21    <---------ANAC58         --------->DEAR3(2)<--------   cgaagcgagtcggcagcgaaagtcatggtggggacagagcacgtgtctagagcgtgaaccgtgaaacgacaaaatgaccgacgtgaatgaggtggcaggt  5765800 ----NtERF2                                                           --------->SPL7 ---->ALFIN1                                                         ------>MYB46(1) ->PIF5                                                              -------->P  <---------At4g35610 --PIF5                                                              ------>MYB83--------->At4g35610 -->At4g35610                                                        --------->MYB52(1) -->ZAT2                     <-----------GT1                        --------->MYB55(1) ---ZAT2           ------->MYC3                                    --------->DEAR3(1) ->MYB55(2)        <-------MYC3                                    ----------->HVH21 ---At4g35610     <---------TGA1a              <---------ANAC58    --------->MYB46(3) ->MYB111(1)      --------->TGA1a              <---------ANAC58   --------->DEAR3(2) --MYB46(3)       <---------O2          <---------GLK1(2)         --------->MYB46(3)         -------- -ANAC46          --------->O2    <----------DOF2               <---------ARR14(2)       --------->MYB52(1) ---RAV1(2)       ===========================bZIP_DOF           --------->ARR14(2)    <---------At4g35610   ggctcatgaaacaccgagacacgttgctgtttcacactttcagattatttcttgtttttcaaaccagaaccgaccggcttatcagttgagcaaaccgggt  5765900                 <---------ICU4                                       --------->ANAC55(2)                <---------ATHB51                                      --------->ANAC58          --------->HSFB2a(2)                                  --------->SPL7       <----------DOF2      <---------------AGL15           <------MYB83         <------MYB46(1)    ------>ZmHOX2a(2)       <---------ALFIN1                <------MYB46(1)      --------->ANAC55(2)   --------->GLK1(1)        --------------->AGL15          --------->MYB59 --------->MYB46(3)   <-----------------AGL1   ----------->RAV1(1)            --------->MYB46(2)    <------MYB83   <---------GLK1(1)       ----------------->AGL2 --------->AHL20(2)  --------->ANAC58  <---------AGP1--------->ICU4              ----------->GT1<---------------AtSPL3<---------ANAC55(2)  --------->ARR11(3)    --------->ANAC58 --------->DAG2    --------------->AtSPL3--------->At4g35610  <---------ARR11(3)    --------->ANAC58---------->DOF2<---------MYB46(3)  --------->ICU4 <---------CCA1(2)      --------->MYB46(3) ----------->GT1 --------->MYB52(2) <---------MYB52(1)----- ->LBD16  <---------HSFB2a(2)      ----------->GT1<---------AHL20(2)  <---------ANAC55(2)      <-----   tttggatctcttttggaaattatgccacgaccacatttagaaaaaagggtaaaaaattggttcggtactgcaacgtaaccattaggtgactaatcttatg  5766000                                                                                   <---------ICU4                                                                                --------->YAB1                                                                              <-----------GT1                                                                            <---------AHL20(2)                                                                   <------ZmHOX2a(2)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                  <---------ARR11(3)        <---------YAB1                <---------TOE2(3)           --------->ARR11(3) ---->YAB1 <---------TOE2(3)         ---------->DOF2          --------->CCA1(2)<---------YAB1 ----YAB1 ---------->DOF2          <---------YAB1      >>>>>>>>>MYB2------>ZmHOX2a(2)       <--------   ataaacaactattaaagtttccctaaaaaaaaaaactattaaagttcaaaattcgaaaaccaagagacgatctcgtattttatcatcatgtcaacatctc  5766100  Previous    Next  AGI:  At1g16850.1    Description:  unknown protein Range:  from: 5764800    to: 5765644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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