Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->HSFB2a(2)               --------->TOE1(3)               --------->TOE2(3)              <---------ANAC55(2)     --------->REM1(1)         --------->MYB59            <-----------GT1<---------HSFB2a(2)                 <-----------RAV1(2)    <---------ANAC46      <---------LBD16               ------>MYB83<---------ZAT14    <---------ANAC58    <---------ARR14(2)              ------>MYB46(1)    <---------ANAC58    --------->ARR14(2)<----------DOF2    <-----------HVH21 --->AHL20(2) ----------->RAV1(2)   ------>ZmHOX2a(1)  <---------ALFIN1            ------->TEIL   aaacttgtgtgaaattacctgaaccatttctggaggtccttcatctttggctaatacccacttggtcaggtatactgacaacatgaaactgatgatgcat  5743200                              <---------ANAC58                              <---------ANAC58                             <-------TEIL                         --------------->AtSPL3                         <---------------AtSPL8                         <---------------AtSPL3 --------->ARR14(2)                             ------                 --------->YAB1                 --------->ARR11(3)                        ------->TEIL                 <------------ATHB5             <---------ARR14(2)                     --------->ANAC58                 --------->ATHB12               <---------ARR11(3)                  --------->ZAT18                --------->ICU4--------->ANAC55(2) ------>ZmHOX2a(2)                 <---------ZAT18                <---------ATHB12            ---------->DOF2     ---------->DOF2   <---------------AtSPL8                <---------YAB1<---------ANAC55(2)<------ZmHOX2a(2)             ---------->DOF2 <-----  ---------->DOF2<--------ATHB1        <---------TOE1(2)---------->DOF2    <-------TEIL--------->ANAC58   actacaaagacgaacacaatgatgggagaagtacgtgctcccatgtaaaagatccctccaaagctcaaaagcagaagtacagaaagggcacgaacattta  5743300                        --------->ANAC46                                              --------->ANAC55(2)                     --------->ZAT18         --------->CCA1(2)                        <---------ANAC55(2)            --------->LBD16                 <---------ARR11(3)                   --------->AtMYB61          <---------LBD16                   --------->ARR11(3)                --------->ZAT6   XXXXXXXXXXXXXXXXXXXX>MIR2111A*       ---------->DOF2                 --------->ARR14(2)          < --->AHL20(2)     --------->At4g35610--------->YAB1       ----------->GT1--------->CCA1(2)         -- ----AHL20(2) <---------GLK1(2)     <---------YAB1---------->DOF2       <---------ARR11(3)      -----   aatttctcagaatgcggattatctgcacaaaacaactcattataaagataccaaaagaaatagaaataaaaccagatataacaccaatacatatttgtat  5743400                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                           --------->LBD16                           --------->CCA1(2)                                               <---------HSFB2a(2)                           <---------GLK1(1)                                               --------->HSFB2a(2)                           --------->GLK1(1)                                              <---------LBD16                          --------->ARR11(3)                                             <---------LBD16                          --------->ARR11(1)                                           <---------ARR14(2)                          <---------ARR11(3)                                           --------->ARR14(2)                          <---------ARR14(2)                                          --------->GLK1(1)                          --------->ARR14(2)                                          <---------GLK1(1)         <---------MYB46(3)--------->ARR14(1)                                         <----------TaMYB80     <---------DEAR3(1) ----------->ARR10                                             <---------CCA1(2)  ----------->HVH21   ---------->DOF2                        --------->MYB52(1)      ---------->TaMYB80 ---------ICU4      --------->ANAC58                    ------>ZmHOX2a(1)         --------->ANAC58  < ------->ICU4       --------->ANAC58                   <---------MYB59            --------->ANAC58  < ---->AHL20(2)   <-------TEIL               ----------->GT1--------->MYB46(3)<-----------GT1  <------   aaatatgacggtgtttagatgcaagaaagatatgctcgagagagaagggtattatgtcctaaccaatggactgtaagttttactacgcatatccgggaag  5743500     <---------ANAC58     <---------ANAC58 ------>ZmHOX2a(1) ----->ARR11(3) ------ARR11(3) -----HSFC1(2) ---->HSFB2a(1) ---->HSFC1(2) --MYB46(1)                              <---------ARR11(3) -----HSFB2a(1)                          --------->ARR11(3) --MYB83<-----------HVH21      <---------ANAC58                               ------------------>SPL14 ----->ARR10                   <---------ANAC46                   <-----------GT1 ----AtMYB61                   <---------ANAC58         <---------ICU4    <-----------GT1 ---------ANAC58 --------->ANAC58 --------->At4g35610--------->YAB1    ------->TEIL ---------ANAC58 --------->ANAC58 <---------At4g35610<---------ICU4    --------->ARR14(2)           - --P <---------ANAC46        --------->ZAT18      --------->WOX13(1)   <---------ARR14(2)       -----   gtccttggcttgtcactgtaagaaaccagagtggcctgctcaacatcttcatccatcatcatgttttgtaacgaatttgccctccgaacaaggggaagag  5743600                                 --------->ARR14(2)                                 <---------ARR14(2)                               --------->LBD16                              <---------HSFB2a(2)                          --------->At4g35610                     <---------At4g35610                --------->ANAC58                     --------->ZAT2                     --------->ANAC46                     --------->At4g35610                --------->ANAC58                     <------NtERF2                    --------->ARR14(1)                     <---------ZAT2       <---------At4g35610        --------->LBD16 ---------->CDC5   --------->At4g35610      <---------ARR11(3) ---------->TBP--------->LBD16--------->HSFB2a(2)--------->YAB1    --------->ARR11(3) ------>GT1  <---------LBD16----------->RAV1(1)------->TEIL    ---------->DOF2        --------->ANAC46   gtataaaacccgtgctacggggcagctcagccccagaacttggacgctgaatcttgatacgctacaaaagaccctccaaaggtttaccacagcataacaa  5743700                                                                                           <---------                                                                                         <-----------                                                                                        -------------                                                                                        -------------                                                                                        <------------                                                                                        <------------                                         <---------GLK1(2)                             ------>MYB83                                        --------->At4g35610                            ------>MYB46(1)                              <---------ARR11(3)                                     --------->AtMYB61                 ---------->DOF2        <---------At4g35610                          --------->DEAR3(1)             ------->GAMYB    --------->ARR11(3)                 <------------CBF <---------ALFIN1       --------->YAB1        <---------CCA1(2)      <----------DOF2       --------->LBD16------------   gagaactaatcgtaacccacaaagtctgactatatcttgatcagcttcttcacactttctcactcggtattgactccgagagaaacacctcccatatata  5743800                 --------->GLK1(2)                <---------GLK1(2)                --------->ARR11(3)    <---------At4g35610    --------->At4g35610 --TBP          --------->ARR14(2)               --------->LBD16 ----AGL15      <---------ARR14(2)              --------->ANAC58 ---->AGL3     --------->HSFB2a(1)              --------->LBD16 ---->AGL2     <---------HSFB2a(1)              --------->ANAC58 -----AGL2     <---------HSFC1(2)              <---------LBD16                      --------->GLK1(2) -----AGL3     --------->HSFC1(2)   --------->ANAC58                     --------->SPL7         ----- --->AGL15    ----------->ARR10     --------->ANAC58       --------------------->WRI1     <---------ZAT6   gttttcagcataagagaagattctgaaataaaactgacaagaattaagccccggaaaatttctctgtattaatcggacaccatgaaattctactgtaaga  5743900                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             <---------AGP1                                             --------->AGP1                                             --------->ARR11(3)                                             --------->ARR14(2)                                             <---------ARR14(2)                                             <---------ARR11(3)                                            <---------CCA1(2)            --------->ANAC46   ---------                                          --------->YAB1          --------->ARR11(3)       <---------                     ------>MYB46(1)     <---------ATHB12         <---------ARR11(3)       --------->ANAC46                     ------>MYB83       ------>MYB46(1)         <---------YAB1           <---------DOF5.7(2)                    ----------->RAV1(1) ------>MYB83          --------->YAB1           --------->DOF5.7(2)           --------->HSFB2a(2)     <-----------GT1 <---------GLK1(2)------>ZmHOX2a(2) --------->TOE2(3) ---->ARR11(3)     --------->AtMYB61   --------->WOX13(1)    <---------YAB1          <---------ANAC55(2)   tttagctagacttatcgaacaccaacattttgtagataaaccaatcagatctaaattctcactatcatgatctaaacgaaaacgaaaacgtaaacgacag  5744000                              <-------TEIL                             --------->ARR14(1)                             --------->CCA1(2)                            --------->ARR11(1)                                                     <-                            <---------ARR14(2)                                                    <--                            --------->ARR14(2)                                            <----------ID1                       --------->MYB52(1)                                               --------->ZAT14 -->RAV1(1)    --------->ANAC58     --------->AHL20(2)                                  <---------ZAT14 -ID1          --------->ANAC58     --------->YAB1 ---------->DOF2      ---------->DOF2 --------->REM1(2)   agaattagcgaaattgtaggcaaaataacagatacgaataatatttgtttccgaaatgcgagtaagaaaacccctaaatcggcgaaacagtgaagacaaa  5744100  Previous    Next  AGI:  At1g16780.1    Description:  vacuolar-type H+-translocating inorganic pyrophosphatase, putative. Identical to Putative pyrophosphate-energized membrane proton pump 3 (AVPL2) [Arabidopsis Thaliana] (GB:Q9FWR2); similar to AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2) [Arabidopsis thaliana] (TAIR:AT1G78920.1); similar to AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2) [Arabidopsis thaliana] (TAIR:AT1G78920.2); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ66476.1); similar to H+-translocating pyrophosphatase [Zea mays] (GB:ABK51382.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41672.1); contains InterPro domain Inorganic H+ Range:  from: 5739292    to: 5743562    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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