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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                              --------->At5g28300
-------->YAB1                                                           <---------AHL20(2)
----MYB52(2)                                                     --------->ANAC46
-->At4g35610                         --------->ZAT18       --------->AHL20(2)----------->GT1  <-----
---At4g35610                         <---------ZAT18--------->ANAC58    --------->AHL20(2)    ------
-->ZAT2                         ---------->DOF2     --------->ANAC58   --------->AHL20(2)     <-----
 
aactataactcccaatgtgaaacctttctaaactcgaaagcccactactagtagtacccaaattatacaaacaatttaaacagtaactagaagtgaatat  5622300
                                                             <---------ANAC58
                                                             <---------ANAC58
                                                          --------->ICU4
                                                      --------->LBD16
                                                     <---------ANAC46
<---------At4g35610                                  <---------ANAC55(2)
<---------ZAT2                                       --------->ANAC55(2)              <---------ARR14(2)
--------->ZAT2                                       --------->ANAC58                 --------->ARR14(2)
--------->At4g35610                                  --------->ANAC58        <------ZmHOX2a(1)
----ARR11(3)                                   <---------TOE2(3)         --------->ICU4          <--
--->ARR11(3)                                   --------->DAG2<---------ANAC55(2)  <---------At4g35610
------ARR10               <---------TOE2(3)  ---------->DOF2 --------->ANAC55(2)  --------->At4g35610
 
ctaagctcagagaaggtcgaaatcgaattaagaaacaacttaaattcaaaaaggttgcgcaattacgagtcttgtgatgaggaacagcagatagagaggg  5622400
                                                                                                   -
                                                                                                   <
                                                                                                   -
                                                                                                  --
                                                                                                  --
                                      --------->DAG2                                              --
                                     ---------->DOF2                                              --
                         --------->DAG2                                --------->REM1(2)          --
                        ---------->DOF2                             --------------->AGL15        ---
         ----------->HVH21   <---------MYB46(3)           --------->TOE2(3)                      ---
-------KAN4(2)         <---------ATHB12  --------->ALFIN1--------->At4g35610                 -------
 
attaatctggcagtgaccagaaaccaataaagttgttgagaaaagtgtcgaagccaaatcacctcaaaataccatgtacagaacaaattgctgagttaaa  5622500
                                --------->ANAC58
                                --------->ANAC58
<------NtERF2                   --------->ANAC46
-------->LBD16                 --------->ZAT18
---------RAP2.6(3)           --------->ZAT2
----->NtERF2                 <---------At4g35610                                        <---------WOX13(1)
------->RAP2.3(3)            <---------ZAT2                                           --------->ATHB12
------->RAP2.6(2)            --------->At4g35610                                      ----------->GT1
------->DEAR3(1)     --------->GLK1(2)                                        ------>NtERF2
------->ANAC46      --------->ARR14(2)                                       <---------ALFIN1
------->RAP2.3(2)   <---------ARR14(2)                                  --------->At4g35610
------>RAP2.3(1)    <---------GLK1(2)                                   <---------At4g35610    <----
------>ERF1      --------->HSFB2a(2)  <---------DAG2                 <---------At4g35610<---------YAB1
--->DOF2         <---------HSFB2a(2)  <----------DOF2             <---------At4g35610<---------YAB1<
 
gccgccaaattttgctacttccagattctctgagctcgcaactttttcaagcttcttcgttctcaacgatgctgcttctgccacctagatgattaataga  5622600
                                         <---------TOE1(2)
                                      --------->ANAC58
                                    --------->MYB52(1)
                                  <---------MYB52(2)
                             --------->ANAC58
                             --------->TGA1a
                             --------->ANAC58
                             --------->ANAC55(2)
                             <---------ANAC55(2)
                             <---------TGA1a
                             <---------bZIP60(1)
                             --------->bZIP60(1)        <---------AHL20(2)
                             <---------O2<---------TOE2(2)
                             <---------bZIP60(2)  --------->YAB1
                          ----------->TGA1        --------->AHL20(2)
       --------->ZAT6     ----------->HVH21       <---------AHL20(2)                      <---------ANAC58
    --------->YAB1      <---------ANAC55(2)   <---------AHL20(2)                          <---------ANAC58
--------->ZAT6          --------->ANAC55(2)   --------->AHL20(2)                   <---------YAB1
-----GLK1(2)        <------ZmHOX2a(1) --------->ANAC58  *TSS <-----------GT1       <---------AHL20(2)
---------YAB1<---------ZAT6  --------->O2------->TEIL  --------->AHL20(2)   <----------DOF2
 
ttatcactgatcactagtgatcaggataagtgacgcgactaacgcatgtttaattatataaaattcacgtttgccttctctttgatataattcgcgttcg  5622700
                               --------->ANAC58                    --------->LBD16
                    <---------ARR14(2)                            --------->HSFB2a(2)
                    --------->ARR14(2)                 <----------DOF2
                 <---------ANAC58         <------MYB83 <---------DAG2          *TSS
                 <---------ANAC58         <------MYB46(1)         --------->HSFC1(1)<---------ARR11(3)
         <---------AHL20(2)    --------->ANAC46       <---------DAG2  ---------->DOF2
        --------->AHL20(2)     --------->ANAC58<-----------GT1    <---------HSFC1(1)--------->ARR11(3)
       <---------YAB1  <---------YAB1    <---------AtMYB61        <---------HSFB2a(2)
   <----------DOF2<----------DOF2      <---------MYB52(1)    <<<<<<<<<TBF1    ----------->GT1
 
cgttctctttattaaaaatcgcgtttctgataaaacgcagtcgtttggttttacttcccttttcttcttccagaaaagaattcgtaaaatctcacttcaa  5622800
                                                                                             -------
                                                                                             -------
                     ---------->DOF2                                                --------->ZAT2
                  --------->TOE2(3)                                                 --------->At4g35610
                  --------->TOE1(3)                                                 <---------At4g35610
             <---------MYB52(2)     <-----------GT1                            --------->HSFB2a(2)
            --------->ANAC46   <---------AHL20(2)                             ------>ZmHOX2a(2)
            --------->ANAC58   --------->AHL20(2)                <---------ATHB12   <---------ZAT2
            --------->ANAC58  --------->AHL20(2)             <---------MYB52(2)<---------HSFB2a(2)
 
ccttctcttctctgcaagaaacctaaaagcctatttatttcacctctctctctctctctctgcaactaatcacttgttcgatctcgaagctgaagctaaa  5622900
                                       <---------ANAC46
                                       <---------ANAC58
                                       <---------ANAC58
                                      <-------TEIL
                                     --------->CCA1(2)
                                    <---------ARR14(2)
                                    --------->ARR14(2)
                                    <---------GLK1(2)
                                    --------->ARR11(1)                                            --
                                   --------->HSFB2a(1)                                            <-
                                   --------->HSFC1(2)                                          <----
              --------->ANAC46     <---------HSFC1(2)                                     --------->ATHB12
           <---------ZAT14         <---------HSFB2a(1)                                   <---------YAB1
--------->ANAC58                  ----------->ARR10                                      <---------ATHB12
--------->ANAC58       <---------ARR11(3)                                                --------->ICU4
--->DOF2   --------->ZAT14<----------DOF2                                               <---------TOE2(3)
-->MYB52(1)<---------REM1(2)    --------->LBD16 ------>ZmHOX2a(2)  --------->YAB1      --------->YAB1
 
ggtaagctattctcttcacagcgctagttcttttccgaagattcgtgtcgatctcaaaaatcccattctatcaaattgtttttaagactctaatgattta  5623000
                               <---------bZIP60(2)
         --------->TOE1(3)     <---------ANAC46    --------->LBD16
         --------->TOE2(3)    <-----------------------TaNAC69(2)
        ----------->RAV1(2) ----------->TGA1      <---------LBD16
   --------->AtMYB61        ----------->HVH21     --------->LBD16
------>MYB46(1)            <-----------HVH21     <---------LBD16                       <----------DOF2
------>MYB83              --------->LBD16        <---------ANAC46                    --------->At4g35610
------->AtMYB61          --------->LBD16        <---------LBD16           <-----------RAV1(1)
--------MYB59           <---------LBD16      <---------GLK1(1)  ------>ZmHOX2a(1)    --------->ZAT2
-------GT1             ------>ZmHOX2a(2)     --------->GLK1(1)------>ZmHOX2a(2)      <---------At4g35610
 
accaaaccaaaacctgaatcgtttgatcccggtgacgttgaaaccctgaattccggggaaattgatcctactcgtttgtgttgttcacagctttcgctaa  5623100
                                                                     <---------ICU4
                                                          ------->TEIL
                                                       --------->ANAC58                        <----
                                                       --------->ANAC58                        -----
                                                      <-------TEIL   --------->YAB1     --------->MYB52(2)
                                                  <---------------AtSPL8              <--------P
          --------->CCA1(2)                       <---------------AtSPL3              <---------MYB52(1)
      <------ZmHOX2a(1)                        <-----------HVH21    <---------YAB1 <---------TOE2(3)
<---------ANAC58                           <---------ALFIN1         <---------ATHB12<---------MYB46(3)
<---------ANAC58       --------------->AtSPL8 <----------DOF2 ----------->GT1  <---------ARR14(2)
 
tttgcttaaggagctatgggagatagtcagtactcgttttctctcaccactttcaggtacgaacttggttaatcatagtgagtattttggttagtttttg  5623200
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AGI:  At1g16460.1   
Description:  ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2); thiosulfate sulfurtransferase. similar to ST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1), thiosulfate sulfurtransferase [Arabidopsis thaliana] (TAIR:AT1G79230.1); similar to ST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1) [Arabidopsis thaliana] (TAIR:AT1G79230.3); similar to unknown [Populus trichocarpa] (GB:ABK94242.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763); contains InterPro domain Thiosulphate sulphurtransferase, conserved site; (InterPro:IPR001307)
Range:  from: 5619576    to: 5622657    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g16470.1   
Description:  PAB1 (PROTEASOME SUBUNIT PAB1); peptidase. Identical to Proteasome subunit alpha type-2-A (PAB1) [Arabidopsis Thaliana] (GB:O23708;GB:Q94EI0); similar to 20S proteasome alpha subunit B, putative [Arabidopsis thaliana] (TAIR:AT1G79210.1); similar to 20S proteasome alpha subunit B, putative [Arabidopsis thaliana] (TAIR:AT1G79210.3); similar to 20S proteasome alpha subunit B, putative [Arabidopsis thaliana] (TAIR:AT1G79210.2); similar to unknown [Populus trichocarpa] (GB:ABK93363.1); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR00
Range:  from: 5622780    to: 5625637    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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