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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
At5g28300
-------->
YAB1
<---------
AHL20(2)
----
MYB52(2)
--------->
ANAC46
-->
At4g35610
--------->
ZAT18
--------->
AHL20(2)
----------->
GT1
<-----
---
At4g35610
<---------
ZAT18
--------->
ANAC58
--------->
AHL20(2)
------
-->
ZAT2
---------->
DOF2
--------->
ANAC58
--------->
AHL20(2)
<-----
aactataactcccaatgtgaaacctttctaaactcgaaagcccactactagtagtacccaaattatacaaacaatttaaacagtaactagaagtgaatat
5622300
<---------
ANAC58
<---------
ANAC58
--------->
ICU4
--------->
LBD16
<---------
ANAC46
<---------
At4g35610
<---------
ANAC55(2)
<---------
ZAT2
--------->
ANAC55(2)
<---------
ARR14(2)
--------->
ZAT2
--------->
ANAC58
--------->
ARR14(2)
--------->
At4g35610
--------->
ANAC58
<------
ZmHOX2a(1)
----
ARR11(3)
<---------
TOE2(3)
--------->
ICU4
<--
--->
ARR11(3)
--------->
DAG2
<---------
ANAC55(2)
<---------
At4g35610
------
ARR10
<---------
TOE2(3)
---------->
DOF2
--------->
ANAC55(2)
--------->
At4g35610
ctaagctcagagaaggtcgaaatcgaattaagaaacaacttaaattcaaaaaggttgcgcaattacgagtcttgtgatgaggaacagcagatagagaggg
5622400
-
<
-
--
--
--------->
DAG2
--
---------->
DOF2
--
--------->
DAG2
--------->
REM1(2)
--
---------->
DOF2
--------------->
AGL15
---
----------->
HVH21
<---------
MYB46(3)
--------->
TOE2(3)
---
-------
KAN4(2)
<---------
ATHB12
--------->
ALFIN1
--------->
At4g35610
-------
attaatctggcagtgaccagaaaccaataaagttgttgagaaaagtgtcgaagccaaatcac
ctcaaaataccatgtacagaacaaattgctgagttaaa
5622500
--------->
ANAC58
--------->
ANAC58
<------
NtERF2
--------->
ANAC46
-------->
LBD16
--------->
ZAT18
---------
RAP2.6(3)
--------->
ZAT2
----->
NtERF2
<---------
At4g35610
<---------
WOX13(1)
------->
RAP2.3(3)
<---------
ZAT2
--------->
ATHB12
------->
RAP2.6(2)
--------->
At4g35610
----------->
GT1
------->
DEAR3(1)
--------->
GLK1(2)
------>
NtERF2
------->
ANAC46
--------->
ARR14(2)
<---------
ALFIN1
------->
RAP2.3(2)
<---------
ARR14(2)
--------->
At4g35610
------>
RAP2.3(1)
<---------
GLK1(2)
<---------
At4g35610
<----
------>
ERF1
--------->
HSFB2a(2)
<---------
DAG2
<---------
At4g35610
<---------
YAB1
--->
DOF2
<---------
HSFB2a(2)
<----------
DOF2
<---------
At4g35610
<---------
YAB1
<
gccgccaaattttgctacttccagattctctgagctcgcaactttttcaagcttcttcgttctcaacgatgctgcttctgccacctagatgattaataga
5622600
<---------
TOE1(2)
--------->
ANAC58
--------->
MYB52(1)
<---------
MYB52(2)
--------->
ANAC58
--------->
TGA1a
--------->
ANAC58
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
TGA1a
<---------
bZIP60(1)
--------->
bZIP60(1)
<---------
AHL20(2)
<---------
O2
<---------
TOE2(2)
<---------
bZIP60(2)
--------->
YAB1
----------->
TGA1
--------->
AHL20(2)
--------->
ZAT6
----------->
HVH21
<---------
AHL20(2)
<---------
ANAC58
--------->
YAB1
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
ZAT6
--------->
ANAC55(2)
--------->
AHL20(2)
<---------
YAB1
-----
GLK1(2)
<------
ZmHOX2a(1)
--------->
ANAC58
*
TSS
<-----------
GT1
<---------
AHL20(2)
---------
YAB1
<---------
ZAT6
--------->
O2
------->
TEIL
--------->
AHL20(2)
<----------
DOF2
ttatcactgatcactagtgatcaggataagtgacgcgactaacgcatgtttaattat
ataaaattcacgtttgccttctctttgatataattcgcgttcg
5622700
--------->
ANAC58
--------->
LBD16
<---------
ARR14(2)
--------->
HSFB2a(2)
--------->
ARR14(2)
<----------
DOF2
<---------
ANAC58
<------
MYB83
<---------
DAG2
*
TSS
<---------
ANAC58
<------
MYB46(1)
--------->
HSFC1(1)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ANAC46
<---------
DAG2
---------->
DOF2
--------->
AHL20(2)
--------->
ANAC58
<-----------
GT1
<---------
HSFC1(1)
--------->
ARR11(3)
<---------
YAB1
<---------
YAB1
<---------
AtMYB61
<---------
HSFB2a(2)
<----------
DOF2
<----------
DOF2
<---------
MYB52(1)
<<<<<<<<<
TBF1
----------->
GT1
cgttctctttattaaaaatcgcgtttctgataaaacgcagtcgtttggttttacttcccttttcttcttccagaaaaga
attcgtaaaatctcacttcaa
5622800
-------
-------
---------->
DOF2
--------->
ZAT2
--------->
TOE2(3)
--------->
At4g35610
--------->
TOE1(3)
<---------
At4g35610
<---------
MYB52(2)
<-----------
GT1
--------->
HSFB2a(2)
--------->
ANAC46
<---------
AHL20(2)
------>
ZmHOX2a(2)
--------->
ANAC58
--------->
AHL20(2)
<---------
ATHB12
<---------
ZAT2
--------->
ANAC58
--------->
AHL20(2)
<---------
MYB52(2)
<---------
HSFB2a(2)
ccttctcttctctgcaagaaacctaaaagcctatttatttcacctctctctctctctctctgcaactaatcacttgttcgatctcgaagctgaagctaaa
5622900
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<-------
TEIL
--------->
CCA1(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
GLK1(2)
--------->
ARR11(1)
--
--------->
HSFB2a(1)
<-
--------->
HSFC1(2)
<----
--------->
ANAC46
<---------
HSFC1(2)
--------->
ATHB12
<---------
ZAT14
<---------
HSFB2a(1)
<---------
YAB1
--------->
ANAC58
----------->
ARR10
<---------
ATHB12
--------->
ANAC58
<---------
ARR11(3)
--------->
ICU4
--->
DOF2
--------->
ZAT14
<----------
DOF2
<---------
TOE2(3)
-->
MYB52(1)
<---------
REM1(2)
--------->
LBD16
------>
ZmHOX2a(2)
--------->
YAB1
--------->
YAB1
g
gtaagctattctcttcacagcgctagttcttttccgaagattcgtgtcgatctcaaaaatcccattctatcaaattgtttttaagactctaatgattta
5623000
<---------
bZIP60(2)
--------->
TOE1(3)
<---------
ANAC46
--------->
LBD16
--------->
TOE2(3)
<-----------------------
TaNAC69(2)
----------->
RAV1(2)
----------->
TGA1
<---------
LBD16
--------->
AtMYB61
----------->
HVH21
--------->
LBD16
------>
MYB46(1)
<-----------
HVH21
<---------
LBD16
<----------
DOF2
------>
MYB83
--------->
LBD16
<---------
ANAC46
--------->
At4g35610
------->
AtMYB61
--------->
LBD16
<---------
LBD16
<-----------
RAV1(1)
--------
MYB59
<---------
LBD16
<---------
GLK1(1)
------>
ZmHOX2a(1)
--------->
ZAT2
-------
GT1
------>
ZmHOX2a(2)
--------->
GLK1(1)
------>
ZmHOX2a(2)
<---------
At4g35610
accaaaccaaaacctgaatcgtttgatcccggtgacgttgaaaccctgaattccggggaaattgatcctactcgtttgtgttgttcacag
ctttcgctaa
5623100
<---------
ICU4
------->
TEIL
--------->
ANAC58
<----
--------->
ANAC58
-----
<-------
TEIL
--------->
YAB1
--------->
MYB52(2)
<---------------
AtSPL8
<--------
P
--------->
CCA1(2)
<---------------
AtSPL3
<---------
MYB52(1)
<------
ZmHOX2a(1)
<-----------
HVH21
<---------
YAB1
<---------
TOE2(3)
<---------
ANAC58
<---------
ALFIN1
<---------
ATHB12
<---------
MYB46(3)
<---------
ANAC58
--------------->
AtSPL8
<----------
DOF2
----------->
GT1
<---------
ARR14(2)
tttgcttaaggagct
atgggagatagtcagtactcgttttctctcaccactttcag
gtacgaacttggttaatcatagtgagtattttggttagtttttg
5623200
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AGI:
At1g16460.1
Description:
ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2); thiosulfate sulfurtransferase. similar to ST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1), thiosulfate sulfurtransferase [Arabidopsis thaliana] (TAIR:AT1G79230.1); similar to ST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1) [Arabidopsis thaliana] (TAIR:AT1G79230.3); similar to unknown [Populus trichocarpa] (GB:ABK94242.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763); contains InterPro domain Thiosulphate sulphurtransferase, conserved site; (InterPro:IPR001307)
Range:
from: 5619576
to: 5622657
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g16470.1
Description:
PAB1 (PROTEASOME SUBUNIT PAB1); peptidase. Identical to Proteasome subunit alpha type-2-A (PAB1) [Arabidopsis Thaliana] (GB:O23708;GB:Q94EI0); similar to 20S proteasome alpha subunit B, putative [Arabidopsis thaliana] (TAIR:AT1G79210.1); similar to 20S proteasome alpha subunit B, putative [Arabidopsis thaliana] (TAIR:AT1G79210.3); similar to 20S proteasome alpha subunit B, putative [Arabidopsis thaliana] (TAIR:AT1G79210.2); similar to unknown [Populus trichocarpa] (GB:ABK93363.1); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR00
Range:
from: 5622780
to: 5625637
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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