Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <------ZmHOX2a(1)                                                    ----------->GT1                         <---------ZAT6            <---------TOE1(3)                 ---------->DOF2                   <---------TOE2(3)               --------->AHL20(2)               <---------YAB1                        --------->HSFB2a(2)               <---------AHL20(2)             --------->YAB1               ----------->GT1     <-----------GT1 ---------->DOF2          <--------HAHB4               <---------TOE2(3)     <--- -----GT1      --------->YAB1                <---------YAB1    <---------YAB1         <---------HSFB2a(2)   tctcatgttactcttaataaaaagaaagtgttaatggactatggtctattattaaggaaaaaaacatgagtgtcattaagttaatcgtctggaatagtct  5614200                                                                                  --------->YAB1                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                               --------->YAB1                 --------->YAB1                                              --------->AHL20(1)          --------->DAG2   <------MYB83                                   --------->AHL20(2)         ---------->DOF2   <------MYB46(1)                            ----------->GT1 --------->DAG2    <------NtERF2--------->AHL20(2)                                 ---------->DOF2 ---------->DOF2  --------->ALFIN1        --------->MYB59  ---------->DOF2 <---------ANAC58  --------->AHL20(2)     < ------LBD16     <---------AHL20(2)     --------->AHL20(2) <---------ANAC58 --------->YAB1  <------NtERF2   acgggtggccaaaaaggaattatatgagtaggtttcattcattttaaaagagttggcattagcttgttgacaaagaaaaaataataaaaaggctggcatt  5614300                                                     <---------------AGL15                                                     ------>ZmHOX2a(1)                                                     --------------->AGL15                                                    <---------------AGL15                                                    --------------->AGL15                                                    <-----------------AGL3                                                    <-----------------AGL1                                                    ----------------->AGL3                                                    <-----------------AG                                              --------->AHL20(2)                                              <---------AHL20(2)                 <-------MYC3                <---------AHL20(2)                 ------->MYC2         <-------TEIL  <-----------------AGL2                 <-------MYC2        ===============================HOX2a_HOX2a           <-----------GT1           =======================HOX2a_HOX2a         <---------ICU4              <------ZmHOX2a(2)         -------->HAHB4             --------->AGP1 ----------------->AGL3        <---------YAB1              --------->ARR11(3)        <---------ATHB12            <---------ARR11(3)        <---------ATHB51            --------->ARR14(2)        --------->ICU4  <---------MYB46(3)   --------->AHL20(2)      <---------ICU4  <-------GAMYB <---------ARR14(2)     <---------TOE2(3)                     <--- ----------DOF2  ------->MYC3------->TEIL --------->AHL20(2) <------ZmHOX2a(1)      <----------DOF2   ttctttactaattattccacatgcggttgtgaatctaagatccataaattaattcctattttaggaaactaaaattatgctcttgacttttgaatttctg  5614400                                             ---------->DOF2                                            --------->YAB1            --------->At4g35610            <---------YAB1            <---------At4g35610          --------->YAB1                     ----------->GT1            <---------ZAT2        <-----------GT1  <----------ID1         --------->LBD16   --------->PCF2        ----------->GT1<---------ATHB12           <---------MYB52(1)          ------ ------MYB52(1)   ------>ZmHOX2a(2)     --------->ICU4         --------->MYB52(1)        --------->YAB1   tttgggtcgcacttagctgatccaaaaatgaaaaattcaccaattatcaaagtgagacaaaaacaaaacggtagtccgtagtaaatagcaaacacaatcg  5614500                    --------->ICU4                 ------------>CBF         ------------>CBF                 --------->ZAT6      --------->MYB59       ------------>CBF                         --------------->AtSPL3  <---------ANAC55(2)     --------->At4g35610  --------->YAB1<----------DOF2   ---------->DOF2 --->YAB1      --------->YAB1        ---------->DOF2<----------DOF2  --------------->AtSPL8       <--   gaatatgtaaggtccaatagtcaatattagctcaatagttaaggcccaatagtacttttaggccttttgtgtctgtaccactaaagcctccataggttcc  5614600                                                                                --------->ATERF1(1)                                                                                --------->RAP2.3(1)                                                                                --------->MYB46(3)                                                                               --------->At4g35610                                                                               <---------ATERF1(1)                                                                              <---------ATERF1(1)                                                                             <-----------RAV1(2)                                                                             --------->ATERF1(1)                                                                            --------->ATERF1(1)                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                         <---------At4g35610                                                                         <---------LBD16                                                                        <-----------RAV1(1)                                                                      <---------ZAT2                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                      ----------->RAV1(2)                                                                     <-----------RAV1(1)                                                                     ====================RAV                                                                   <---------At4g35610                                                                   --------->ZAT2                                                                   ----------->RAV1(2)                                                 <---------MYB46(3)=================RAV                                                --------->ALFIN1   <---------ZAT2      <----------DOF2                                            <---------LBD16        --------->At4g35610 <-----------HVH21                                          --------->ARR14(2)     --------->MYB46(3)   <---------ANAC58                                          <---------ARR14(2)    ------>MYB83<------NtERF2  --------->HSFB2a(2)                                        --------->MYB55(2)      ------>MYB46(1)<---------At4g35610                                        --------->ABI4(2)      ================RAV<---------At4g35610                                        <---------MYB46(3)     ----------->RAV1(1)--------->At4g35610                                       --------->ALFIN1        ==========================RAV                                       <---------AtMYB61       ===================RAV <---------ANAC58                                       <---------DEAR3(1)      --------->MYB52(1)--------->DEAR3(1)                                      <------NtERF2           --------->AtMYB61<------NtERF2                                    --------->ALFIN1       ------>NtERF2=================RAV             *TSS       --------->YAB1<-------GAMYB  <------ZmHOX2a(1)--------->ZAT2 ------>NtERF2           ---------->DOF2          <---------DREB2C(2)   --------->ZAT18--------->At4g35610       --         --------->REM1(2)     ---------->DOF2--------->LBD16--------->MYB46(3)<---------ZAT2  ------      <---------ANAC46 --------->ICU4<---------DEAR4(2) --------->At4g35610<---------RAP2.3(1) ------ -------MYB52(1)   <---------YAB1   <---------DEAR3(1)  <---------At4g35610------>NtERF2   <---------HSFB2a(2)   cttcgtttctgtgtaaagggcatgaatgatgaacaaaggcggtggttccggtggaggaagcggaccaacagctgctgcggcagccgctgcgttacagaag  5614700                                           <---------------------WRI1                                           <------NtERF2                                         <---------ANAC46                                         <---------ETT(2)       <---------MYB46(3)              <-----------HVH21       <-----------RAV1(1)            <-----------RAV1(1)    <---------ANAC58                --------->At4g35610          <<<<<<<<<WRKY18    <---------ANAC58                <---------At4g35610        --------->TOE2(3) --------->DAG2              --------->bZIP60(1)         --------->YAB1                      <------- -------->DOF2               <---------bZIP60(1)        <---------ATHB12                <---------AHL20(2) --->ANAC58                  <---------TGA2(1)        --------->WOX13(1)       <--------P<---------AHL20(2) --->ANAC58                  --------->TGA2(1)     --------->TOE2(3)<-----------RAV1(1) --------->AHL20(2)   caaaaggcgttgttgcagagagttgatactgacatcacatctgtcgtcgataacttcaatcaaatcgtcaatgtcgcaagggtaagtgattttaatttcg  5614800                                                                                        <---------ARR11(3)                                                                                        --------->ARR11(3)                                                                              ------>NtERF2                                                                             --------->ANAC58                                                                             --------->ANAC46                                                                             --------->ANAC58                                                                            =========================                           <-----------GT1                                  ------>ZmHOX2a(2)    <---    <----------DOF2     --------->AHL20(2)                        <------MYB83--------->LBD16 <------ ----GT1          <-----------GT1             <-----------RAV1(1) <------MYB46(1)  <---------ATHB12   cttcgtctttggaaatttgtttacaattttttcgaattttgtgaacatctgtgggtttttttttttgtaggtgagtgatccgccaatgaagaactctcag  5614900                                                                     <---------YAB1                                                        --------->AHL20(2)                                                        --------->YAB1                                <------MYB46(1)        <---------ATHB12  --------->YAB1                                <------MYB83         --------->WOX13(1) <---------YAB1                            --------->ATHB12       <---------ATHB12<---------ICU4              <-----                           <---------YAB1  --------->ARR11(3)      --------->YAB1           ---------    <-------TEIL  <---------ANAC58         <---------ARR11(3)     <---------YAB1        <-------TEIL ===HOX2a_HOX2a   <---------ANAC58        <---------CCA1(2)       --------->ICU4     --------->At4g35610 ---ZmHOX2a(1)<---------GLK1(1) ----------->GT1  --------->WOX13(1)--------->ATHB12  <---------At4g35610 ---LBD16     <---------At4g35610         <---------GLK1(1)  --------->YAB1     --------->MYB59<-----   gaagcatacatgatggagatgcgagcatcaagattggtaatttgatatcttcaatcaatcaaattagaatgattatcaaaattaggcagatgcaattagg  5615000                  <-------MYC2                  ------->MYC2                  <-------MYC3                                                            <----------DOF2  <---------TOE1(3)          --------->CCA1(2)                                            <---------DAG2  <---------TOE2(3)         --------->ARR14(2)                             --------->GLK1(2) ----TOE2(3)      ------->MYC3              <---------GLK1(1)              <-----------ARR10 >ICU4    <------ZmHOX2a(1) <---------ARR14(2)                 <---------ATHB12        <-----------GT1 ----TOE1(3)     <----------TaMYB80        <---------ARR11(3)--------->YAB1<---------ARR11(3)   gtttagggtttaggacagcatatgctcacagatatgaaatgtctggatatttgaaacattcactaatgagtctccaaaatctaatctttttacttttggt  5615100  Previous    Next  AGI:  At1g16430.1    Description:  surfeit locus protein 5 family protein / SURF5 family protein. similar to surfeit locus protein 5 family protein / SURF5 family protein [Arabidopsis thaliana] (TAIR:AT1G07950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64970.1); contains InterPro domain Surfeit locus 5 (InterPro:IPR009332) Range:  from: 5614613    to: 5615504    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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