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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
GLK1(2)
--------->
HSFB2a(1)
<---------
HSFB2a(1)
---------
SPL7
<---------
At4g35610
------>
NtERF2
--------
ANAC58
<---------
ZAT2
--------->
ANAC46
--------
ANAC58
--------->
AHL20(2)
--------->
ATHB12
-------
--------
MYB46(3)
--------->
YAB1
<-------
TEIL
<----------
ID1
--------
HVH21
------>
ZmHOX2a(1)
<------------
MYB.PH3(1)
---------->
DOF2
->
ZmHOX2a(1)
<---------
ICU4
--------->
At4g35610
<---------
ARR14(2)
--------->
ANAC58
>
ARR14(2)
<---------
YAB1
--------->
ZAT2
<-----------
GT1
--------->
ANAC58
<--
-
ARR14(2)
------>
ZmHOX2a(1)
<---------
AHL20(2)
<---------
ZAT6
----------->
HVH21
----
gtcgttcgaaagattcctcttcatcattcctattatatgagctggagaaggcatatagtagtgtaaccgattcattgtatttgacgccaaaaaaaagaaa
5596300
<------
MYB46(1)
--------->
ANAC55(2)
<---------
ANAC55(2)
<------
MYB83
--------->
YAB1
<---------
ICU4
-------->
HAHB4
--------->
TOE2(3)
--------->
ICU4
------>
MYB83
--------->
YAB1
------>
MYB46(1)
<---------
AHL20(2)
--------->
AtMYB61
--------->
AHL20(2)
>>>>>>>>>>
WRKY38
--------->
AHL20(2)
<---
>>>>>>>>>>
WRKY26
<---------
AHL20(1)
-------
<-----------
HVH21
-------->
P
<---------
AHL20(2)
<-------
--------->
GLK1(2)
<---------
MYB59
--------->
AHL20(1)
<----------
DOF2
----------
--->
DOF2
>>>>>>>>>>
WRKY43
--------->
AHL20(2)
<---------
TOE2(3)
<---------
----
ZmHOX2a(1)
--------->
At4g35610
<---------
AHL20(2)
--------->
MYB59
<----------
----->
ICU4
<---------
At4g35610
------>
ZmHOX2a(1)
<---------
ATHB51
--------->
AHL20(2)
<-----------
GT1
ggattatctgtcatggaagatgaccaacctatatttcctctatgcatataatttaataatgaaattaggtattaattctttttttttttttaactattat
5596400
<---------
ANAC55(2)
--------->
YAB1
-------->
HAHB4
--------->
ICU4
----------->
GT1
--------->
ARR14(2)
--------->
ICU4
<---------
ANAC55(1)
<---------
ARR14(2)
------------
AtSPL8
--------->
ANAC55(2)
--------->
AHL20(2)
-->
YAB1
<---------
YAB1
<---------
ANAC55(2)
--------->
GLK1(1)
--
YAB1
--------->
YAB1
--------->
ANAC55(2)
--------->
DAG2
--------->
TOE2(3)
----->
AGL15
<-------
TEIL
--------->
DAG2
--------->
AHL20(2)
<---------
ATHB12
------
AGL15
<-----------
GT1
<---------
ANAC46
---------->
DOF2
--------->
ICU4
--------->
At4g35610
-------
AGL3
<---------
ICU4
---------->
DOF2
<---------
AHL20(2)
--------->
ANAC46
------->
TEIL
aggtactgagtaataatagttacatgttaagtaaagttgagtttataaaattagataaagcaaatccacgactaatgagtatgaaccgtaatgaactgaa
5596500
<-----------
TBP
--------->
ATHB51
<---------
ICU4
<--------
ATHB1
<---------
AHL20(2)
--------->
ICU4
--------->
YAB1
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<-----------
HVH21
<---------
YAB1
--------->
ATHB12
--------->
ANAC58
--------->
YAB1
--------->
ICU4
--------->
TCP16(1)
<---------
YAB1
--------->
ANAC55(2)
--------->
PCF5
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
TCP16(2)
<-------
MYC2
<---------
AHL20(1)
--------->
ANAC58
--------->
AHL20(2)
--------->
WRKY12
------->
MYC2
--------->
AHL20(1)
<---------
ANAC55(2)
<
--------->
WRKY38(1)
------->
MYC3
--------->
AHL20(2)
--------->
ANAC55(1)
--
<---------
ANAC46
---------->
DOF2
--------->
AHL20(1)
--------->
ANAC46
<---------
AHL20(2)
<----------
DOF2
--------->
ANAC58
<-------
MYC3
<---------
AHL20(2)
<---------
LBD16
--------->
AHL20(2)
ttcatactttgacttcgtggacccaagcttcacatgaagcacgtttgaaatattataataacgcatattaaacacggaatgatttaataatttatataga
5596600
<-------
TEIL
<---------
GLK1(2)
--------->
ARR14(2)
-------->
HAHB4
--------->
YAB1
<---------
ICU4
--------->
YAB1
<---------
TOE2(3)
*
TSS
--------->
AHL20(2)
--------->
TOE2(3)
<---------
AHL20(2)
<---------
ZAT14
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ARR14(2)
<---------
YAB1
<---------
ARR14(2)
<-----------
TBP
--------->
YAB1
-----------
GT1
<---------
YAB1
--------->
GLK1(1)
--------->
AHL20(2)
--------->
HVH21
--------->
YAB1
<---------
GLK1(1)
<---------
AHL20(2)
-
tttgacattttcatttaatgataacacagattcagatttcagacttatatttatacagtagtttgataagaatgaattaatgagagt
ataccataatacc
5596700
----------------->
AGL2
<----
--------->
AtMYB61
------>
ZmHOX2a(2)
<----
<---------
GLK1(2)
---------->
DOF2
----------------->
AGL3
----------->
HVH21
<<<<<<<<<<
WRKY63
--------->
ANAC46
--------->
TOE2(3)
<---------
At4g35610
-------->
YAB1
--------->
ANAC46
<----------
DOF2
<---------
ICU4
--------->
YAB1
--------->
At4g35610
aatagtcaaattcttcaaatacaccaaaacaaaaaagctttgaaactaaacgata
atggctgatccaatatcagaaccattgttgtctcatctcaccgat
5596800
------>
ZmHOX2a(2)
--------->
GLK1(2)
----
--------->
MYB52(1)
<------
ZmHOX2a(2)
<---------
GLK1(2)
<---
<---------
DOF5.7(2)
<---------
ARR11(3)
<---------
ARR14(2)
-----
<---------
WRKY45
--------->
ARR14(2)
--------->
ARR14(2)
<----
<---------
WRKY12
<---------
ARR14(2)
<---------
LBD16
<----
<---------
WRKY38(1)
--------->
ARR11(3)
<---------
GLK1(1)
-------
<---------
LBD16
<---------
ARR14(3)
--------->
GLK1(1)
<-------
-----
ATHB12
--------->
ARR14(3)
--------->
YAB1
--------
-----
YAB1
------->
GAMYB
<---------
ETT(2)
--------->
WOX13(1)
<----------
gattctggagtcaacgaaaaaaccagattagaagcattgactttcgacaagatcgtcgaacaaagtctatcagatttcggattctggcaatttttccaga
5596900
--------->
ALFIN1
<-------
MYC2
------->
MYC3
<-------
PIF5
------->
MYC2
------->
MYC4
<---------
ZAT14
<-------
MYC4
<---------
ZAT14
<-------
MYC3
--------->
ZAT14
------->
PIF5
<---------
ICU4
--------->
O2
--------->
YAB1
--------->
PIF3(3)
<-------
TEIL
<---------
REM1(2)
<---------
PIF3(3)
====
<---------
RVE1(1)
<---------
TGA1a
----
--------->
GLK1(1)
--------->
TGA1a
<----
--------->
ARR11(3)
<---------
ANAC58
=====
----->
GLK1(1)
--------->
ARR14(2)
<---------
ANAC58
------
------
GLK1(1)
<---------
ARR11(3)
<---------
GLK1(2)
<-----
---->
ARR14(2)
<---------
ARR14(2)
<---------
At4g35610
<-----
-----
ARR14(2)
<---------
ZAT2
<---------
ANAC46
<---------
O2
--------
-----
GLK1(2)
<---------
At4g35610
--------->
ZAT14
=========================
MYC_MYB
-->
LBD16
--------->
At4g35610
--------->
ZAT18
--------->
ANAC46
--------->
MYB46(3)
--
HSFB2a(2)
---------->
CDC5
<---------
At5g28300
<---------
ALFIN1
<-----------
GT1
->
HSFB2a(2)
<-----------
RAV1(2)
--------->
REM1(2)
---------------->
PIF3(2)
--------
-
GT1
<----------
DOF2
==================================================
MYC_MYB
------->
GAMYB
tttccctcgttggactagctttgctcttcgacgctcagcagatattcatcaccgtgtacacagatgcttatcccacgtggcactgtcttaaccacacgat
5597000
<---------
HSFC1(2)
<---------
HSFB2a(1)
--------->
ARR14(2)
--------->
HSFB2a(1)
<---------
ARR14(2)
<---------
ZAT2
<---------
ARR14(2)
--------->
At4g35610
--------->
LBD16
--------->
LBD16
<---------
At4g35610
<---------
PCF2
----------------->
AG
------>
ZmHOX2a(1)
--------->
HSFC1(2)
<------
NtERF2
--------->
ARR14(2)
------>
ZmHOX2a(2)
--------->
ZAT2
<---------
ATERF1(1)
<-----------------
AGL1
============
HOX2a_HOX2a
--------->
ANAC58
--------->
SPL7
<---------
GLK1(1)
-->
ZmHOX2a(2)
----------->
RAV1(1)
--------->
ZAT2
------>
NtERF2
--------->
GLK1(1)
--
ZmHOX2a(2)
------>
NtERF2
--------->
At4g35610
--------->
ATERF1(1)
----------------->
AGL1
============
HOX2a_HOX2a
--------->
ANAC58
----------->
HVH21
---------->
TaMYB80
--->
ARR14(2)
--------->
ANAC46
<---------
ZAT2
--------->
ABI4(2)
<-----------------
AGL2
----
ARR11(3)
----------->
HVH21
<------
ZmHOX2a(2)
<---------
MYB46(3)
<---------
MYB52(1)
----
ARR14(2)
<---------
ETT(1)
--------->
ARR11(3)
--------->
ALFIN1
<-----------
HVH21
->
ANAC58
<---------
ATERF1(1)
<---------
ARR11(3)
<---------
DEAR3(1)
--------->
ANAC46
->
ANAC58
<---------
At4g35610
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
GLK1(2)
<-----
ctgtgatccttcagcctccgacatctgcaagcttccaagatcagcttgggaatgggacggtggctcccagggcaaatccgtcatttccgaatttggcctc
5597100
<------
NtERF2
----------------->
AGL1
--------->
ABI4(2)
<----------
DOF2
<---------
DEAR3(2)
<---------
ANAC58
--------->
REM1(1)
<---------
ANAC58
<-----
--------->
ZAT14
<----------
DOF2
<---------
ANAC58
<-----
<----------
DOF2
<---------
At4g35610
<-----------
RAV1(1)
<---------
ANAC58
<-----
--------->
ZAT18
--------->
ARR14(2)
------>
NtERF2
----------->
GT1
<---------
HSFB2a(2)
-
NtERF2
<---------
ARR11(3)
----------->
ARR10
<---------
DEAR3(1)
<-----------
GT1
--------->
HSFB2a(2)
gagtgctcgagctctttactcagaggtatgcctagttctgctttctacatcggtgccattgttggagggttttttcttgctttgattccagacgattcct
5597200
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AGI:
At1g16370.1
Description:
ATOCT6; carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. similar to ATOCT5 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER5), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G79410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64952.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196)
Range:
from: 5596688
to: 5598441
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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