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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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        <---------GLK1(2)
       --------->HSFB2a(1)
       <---------HSFB2a(1)
---------SPL7                       <---------At4g35610                          ------>NtERF2
--------ANAC58                      <---------ZAT2                              --------->ANAC46
--------ANAC58               --------->AHL20(2)                     --------->ATHB12         -------
--------MYB46(3)             --------->YAB1                        <-------TEIL <----------ID1
--------HVH21             ------>ZmHOX2a(1)                   <------------MYB.PH3(1)    ---------->DOF2
->ZmHOX2a(1)        <---------ICU4  --------->At4g35610     <---------ARR14(2)  --------->ANAC58
>ARR14(2)          <---------YAB1   --------->ZAT2          <-----------GT1     --------->ANAC58 <--
-ARR14(2)    ------>ZmHOX2a(1)<---------AHL20(2)         <---------ZAT6      ----------->HVH21  ----
 
gtcgttcgaaagattcctcttcatcattcctattatatgagctggagaaggcatatagtagtgtaaccgattcattgtatttgacgccaaaaaaaagaaa  5596300
                                                               <------MYB46(1)
                                                               --------->ANAC55(2)
                                                               <---------ANAC55(2)
                                                               <------MYB83
                                                     --------->YAB1
                                                     <---------ICU4
                                                     -------->HAHB4
                        --------->TOE2(3)           --------->ICU4
                      ------>MYB83                --------->YAB1
                      ------>MYB46(1)            <---------AHL20(2)
                    --------->AtMYB61            --------->AHL20(2)
                 >>>>>>>>>>WRKY38               --------->AHL20(2)                              <---
                 >>>>>>>>>>WRKY26               <---------AHL20(1)                           -------
     <-----------HVH21-------->P                <---------AHL20(2)                          <-------
 --------->GLK1(2)  <---------MYB59             --------->AHL20(1)        <----------DOF2 ----------
--->DOF2         >>>>>>>>>>WRKY43           --------->AHL20(2)<---------TOE2(3)           <---------
----ZmHOX2a(1)--------->At4g35610           <---------AHL20(2)--------->MYB59            <----------
----->ICU4    <---------At4g35610 ------>ZmHOX2a(1) <---------ATHB51--------->AHL20(2) <-----------GT1
 
ggattatctgtcatggaagatgaccaacctatatttcctctatgcatataatttaataatgaaattaggtattaattctttttttttttttaactattat  5596400
                  <---------ANAC55(2)
          --------->YAB1
          -------->HAHB4
         --------->ICU4
    ----------->GT1                                        --------->ARR14(2)
  --------->ICU4  <---------ANAC55(1)                      <---------ARR14(2)
------------AtSPL8--------->ANAC55(2)     --------->AHL20(2)
-->YAB1  <---------YAB1  <---------ANAC55(2)              --------->GLK1(1)
--YAB1 --------->YAB1    --------->ANAC55(2)         --------->DAG2               --------->TOE2(3)
----->AGL15      <-------TEIL--------->DAG2--------->AHL20(2)          <---------ATHB12
------AGL15     <-----------GT1    <---------ANAC46 ---------->DOF2    --------->ICU4     --------->At4g35610
-------AGL3  <---------ICU4 ---------->DOF2<---------AHL20(2)   --------->ANAC46------->TEIL
 
aggtactgagtaataatagttacatgttaagtaaagttgagtttataaaattagataaagcaaatccacgactaatgagtatgaaccgtaatgaactgaa  5596500
                                                                                        <-----------TBP
                                                                                    --------->ATHB51
                                                                                    <---------ICU4
                                                                                    <--------ATHB1
                                                                                    <---------AHL20(2)
                                                                                   --------->ICU4
                                                                                 --------->YAB1
                                                                                <---------AHL20(2)
                                                    --------->YAB1             --------->AHL20(2)
                        <-----------HVH21          <---------YAB1           --------->ATHB12
                     --------->ANAC58            --------->YAB1            --------->ICU4
                --------->TCP16(1)              <---------YAB1        --------->ANAC55(2)
                --------->PCF5                 --------->AHL20(2)     --------->ANAC58  <---------AHL20(2)
               <---------TCP16(2)     <-------MYC2<---------AHL20(1)  --------->ANAC58  --------->AHL20(2)
              --------->WRKY12        ------->MYC2--------->AHL20(1)  <---------ANAC55(2)          <
              --------->WRKY38(1)     ------->MYC3--------->AHL20(2)  --------->ANAC55(1)         --
           <---------ANAC46    ---------->DOF2 --------->AHL20(1)     --------->ANAC46 <---------AHL20(2)
   <----------DOF2   --------->ANAC58 <-------MYC3<---------AHL20(2) <---------LBD16--------->AHL20(2)
 
ttcatactttgacttcgtggacccaagcttcacatgaagcacgtttgaaatattataataacgcatattaaacacggaatgatttaataatttatataga  5596600
                           <-------TEIL
                         <---------GLK1(2)
                         --------->ARR14(2)
               -------->HAHB4                                                             --------->YAB1
               <---------ICU4                                                          --------->YAB1
             <---------TOE2(3)                                                         *TSS
           --------->AHL20(2)                                                          --------->TOE2(3)
           <---------AHL20(2)                                                      <---------ZAT14
          --------->AHL20(2)                   <---------AHL20(2)                  <---------ARR14(2)
      <---------YAB1     <---------ARR14(2)  <-----------TBP                 --------->YAB1
-----------GT1<---------YAB1    --------->GLK1(1)                        --------->AHL20(2)
--------->HVH21--------->YAB1   <---------GLK1(1)                        <---------AHL20(2)        -
 
tttgacattttcatttaatgataacacagattcagatttcagacttatatttatacagtagtttgataagaatgaattaatgagagtataccataatacc  5596700
                                                            ----------------->AGL2             <----
                    --------->AtMYB61                       ------>ZmHOX2a(2)                  <----
     <---------GLK1(2)       ---------->DOF2                ----------------->AGL3      ----------->HVH21
 <<<<<<<<<<WRKY63  --------->ANAC46            --------->TOE2(3)                      <---------At4g35610
-------->YAB1    --------->ANAC46 <----------DOF2 <---------ICU4   --------->YAB1     --------->At4g35610
 
aatagtcaaattcttcaaatacaccaaaacaaaaaagctttgaaactaaacgataatggctgatccaatatcagaaccattgttgtctcatctcaccgat  5596800
                                                 ------>ZmHOX2a(2)           --------->GLK1(2)  ----
        --------->MYB52(1)                      <------ZmHOX2a(2)           <---------GLK1(2)   <---
        <---------DOF5.7(2)                    <---------ARR11(3)           <---------ARR14(2) -----
       <---------WRKY45                        --------->ARR14(2)           --------->ARR14(2) <----
       <---------WRKY12                        <---------ARR14(2)       <---------LBD16        <----
       <---------WRKY38(1)                     --------->ARR11(3)     <---------GLK1(1)      -------
<---------LBD16                                <---------ARR14(3)     --------->GLK1(1)     <-------
-----ATHB12                                    --------->ARR14(3) --------->YAB1            --------
-----YAB1  ------->GAMYB                <---------ETT(2)       --------->WOX13(1)        <----------
 
gattctggagtcaacgaaaaaaccagattagaagcattgactttcgacaagatcgtcgaacaaagtctatcagatttcggattctggcaatttttccaga  5596900
                                                                         --------->ALFIN1
                                                                        <-------MYC2
                                                                        ------->MYC3
                                                                        <-------PIF5
                                                                        ------->MYC2
                                                                        ------->MYC4
                                                     <---------ZAT14    <-------MYC4
                                                   <---------ZAT14      <-------MYC3
                                                   --------->ZAT14      ------->PIF5
                                          <---------ICU4               --------->O2
                                          --------->YAB1               --------->PIF3(3)
                                         <-------TEIL<---------REM1(2) <---------PIF3(3)        ====
                                      <---------RVE1(1)                <---------TGA1a          ----
                                      --------->GLK1(1)                --------->TGA1a         <----
                                     --------->ARR11(3)       <---------ANAC58                 =====
----->GLK1(1)                        --------->ARR14(2)       <---------ANAC58                ------
------GLK1(1)                        <---------ARR11(3)    <---------GLK1(2)                  <-----
---->ARR14(2)                        <---------ARR14(2)   <---------At4g35610                 <-----
-----ARR14(2)                    <---------ZAT2 <---------ANAC46       <---------O2         --------
-----GLK1(2)                     <---------At4g35610 --------->ZAT14   =========================MYC_MYB
-->LBD16                         --------->At4g35610 --------->ZAT18   --------->ANAC46--------->MYB46(3)
--HSFB2a(2)                    ---------->CDC5<---------At5g28300    <---------ALFIN1<-----------GT1
->HSFB2a(2)                    <-----------RAV1(2) --------->REM1(2)---------------->PIF3(2)--------
-GT1           <----------DOF2 ==================================================MYC_MYB------->GAMYB
 
tttccctcgttggactagctttgctcttcgacgctcagcagatattcatcaccgtgtacacagatgcttatcccacgtggcactgtcttaaccacacgat  5597000
                          <---------HSFC1(2)
                          <---------HSFB2a(1)                                         --------->ARR14(2)
                          --------->HSFB2a(1)                                         <---------ARR14(2)
                          <---------ZAT2                               <---------ARR14(2)
                   --------->At4g35610                          --------->LBD16     --------->LBD16
                   <---------At4g35610                     <---------PCF2         ----------------->AG
     ------>ZmHOX2a(1)    --------->HSFC1(2)              <------NtERF2--------->ARR14(2)
   ------>ZmHOX2a(2)      --------->ZAT2                 <---------ATERF1(1)      <-----------------AGL1
============HOX2a_HOX2a  --------->ANAC58           --------->SPL7    <---------GLK1(1)
-->ZmHOX2a(2)  ----------->RAV1(1)     --------->ZAT2    ------>NtERF2--------->GLK1(1)
--ZmHOX2a(2)   ------>NtERF2           --------->At4g35610--------->ATERF1(1)     ----------------->AGL1
============HOX2a_HOX2a  --------->ANAC58         ----------->HVH21  ---------->TaMYB80
--->ARR14(2)  --------->ANAC46         <---------ZAT2    --------->ABI4(2)        <-----------------AGL2
----ARR11(3)  ----------->HVH21     <------ZmHOX2a(2)    <---------MYB46(3) <---------MYB52(1)
----ARR14(2)  <---------ETT(1)     --------->ARR11(3)   --------->ALFIN1   <-----------HVH21
->ANAC58    <---------ATERF1(1)    <---------ARR11(3)   <---------DEAR3(1)--------->ANAC46
->ANAC58 <---------At4g35610       --------->ARR14(2)<---------DEAR3(1)--------->GLK1(2)      <-----
 
ctgtgatccttcagcctccgacatctgcaagcttccaagatcagcttgggaatgggacggtggctcccagggcaaatccgtcatttccgaatttggcctc  5597100
                                                   <------NtERF2
                                                   ----------------->AGL1
                                                  --------->ABI4(2)         <----------DOF2
                                               <---------DEAR3(2)          <---------ANAC58
                                           --------->REM1(1)           <---------ANAC58       <-----
           --------->ZAT14           <----------DOF2                   <---------ANAC58       <-----
          <----------DOF2          <---------At4g35610 <-----------RAV1(1) <---------ANAC58   <-----
--------->ZAT18                --------->ARR14(2) ------>NtERF2----------->GT1      <---------HSFB2a(2)
-NtERF2<---------ARR11(3)    ----------->ARR10<---------DEAR3(1)     <-----------GT1--------->HSFB2a(2)
 
gagtgctcgagctctttactcagaggtatgcctagttctgctttctacatcggtgccattgttggagggttttttcttgctttgattccagacgattcct  5597200
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AGI:  At1g16370.1   
Description:  ATOCT6; carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. similar to ATOCT5 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER5), carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT1G79410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64952.1); contains InterPro domain Major facilitator superfamily MFS-1 (InterPro:IPR011701); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196)
Range:  from: 5596688    to: 5598441    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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