Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ----------->GT1                    <---------AHL20(2)                                             ---------->DOF2                      --------->AHL20(1)                                        ----------->GT1    --------->YAB1         <---------AHL20(1)                                      ------>ZmHOX2a(2)<---------ICU4             --------->AHL20(2)                                     <------ZmHOX2a(2) -------->ATHB1            --------->AHL20(2)            ---------->DOF2         <---------ARR14(2) --------->ATHB12          <---------ATHB12       ----------->RAV1(1)          --------->ARR14(2)<---------ATHB12----------->RAV1(1)--------->LBD16   gattcaatacaacacaaagcttattcaaatatcaattggatccagtaaaaagataaatcattgagaattagccaacaaaaccaataaattccccaattcg  5459900                                                                                ----------->RAV1(1)                                                                        <---------ZAT2                                                                        <---------At4g35610                                                                        --------->At4g35610                                                       --------->ARR14(2)      --------->ANAC46                                                       <---------ARR11(3)     --------->LBD16                                                       --------->ARR11(3)    --------->HSFB2a(2)                                                       <---------ARR14(2)<---------GLK1(2)             <---------WOX13(1)                        <---------GLK1(2)--------->ZAT2           <---      <-----------RAV1(2)                        --------->ANAC46   --------->MYB52(1)           ----   aatcgaacccagaagattgatatcaattcagacctcaaatattcgaaattcaagacagattttcagacactaccagcttccccaacacaattacctagta  5460000                       <---------AHL20(2)                      <---------AHL20(2)                      --------->AHL20(2)                   <--------ATHB1                   --------->YAB1                   <---------ICU4                                                           ---------                   <---------AHL20(1)                                                       ------->TEIL                   --------->AHL20(2)               --------->DAG2                          <--------                   --------->ATHB51                ---------->DOF2                          ---------                  --------->ICU4                  <---------MYB52(1)                   --------->At4g35610          --------->ANAC46     ----------->GT1  --------->ANAC55(2)               <---------ANAC58          --------->ANAC58     <----------ID1   <---------ANAC55(2)               <---------ANAC46          --------->ANAC58   ---------->DOF2    <---------ANAC46                  <---------ANAC58 ------HSFC1(2)   <---------ATHB12    --------->RVE1(1)                     <-------TEIL   <---------GLK1(2) ----->HSFC1(2)   <---------ATHB51>>>>>>>>>>GT-3b--------->LBD16        <-------TEIL<------NtERF2 <<<   gcttcgaatcaaacgacacaataattttataaaaagaaaaatacctgtttccgtaaagcatcccaagagctaggcacatccatggcgtctactgaatctg  5460100                                     ------>NtERF2                                     --------->LBD16                                    <---------LBD16                                    <---------ETT(1)                                   <---------LBD16                                   --------->RAP2.6(3)                                <----------DOF2                         <---------ANAC58   --------->RVE1(1)     <---------ANAC58       <---------DAG2                                     --  <---------ARR11(3)     ==============HOX2a_HOX2a                                           <-------  --------->ARR11(3)    <------ZmHOX2a(2)       <----------DOF2                              <-------  <-----------ARR10    --------->ARR14(2)    <---------ARR11(3)                             ---------  --------->GLK1(2)    <-----------ARR10 --------->ANAC58                                   --------- <---------GLK1(2)     <---------ARR14(2)--------->ANAC58         --------->At4g35610      ------>ZmHOX2a(1) >ARR14(2)      ---------->DOF2 ------>ZmHOX2a(1)            --------->WOX13(1)       --------->TOE1(1) -ARR14(2)<---------DAG2===============HOX2a_HOX2a         <---------AHL20(2)         --------->TOE2(1) >GLK1(2) <----------DOF2------>ZmHOX2a(2)   --------->ARR11(3)   <---------At4g35610------>ZmHOX2a(1) <<<<<<WRKY18 <---------YAB1 <-----------------AGL1 <-----------GT1        --------->GLK1(2)---------   tcaaaatctctcctttatgaaagcggatcgtgtcctttccggcaagagacctttttccgatataaatcagatgcgacaatcttcttcctcgtcctcgtca  5460200                                                                     =====================HOX2a_HOX2a                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                    ======================HOX2a_HOX2a                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                                                                --------->ANAC58                                                                --------->ANAC58                                                              --------->MYB52(1)                   <-                                                           --------->ANAC46                        -- -------->DOF2                                             --------->ANAC58                 <-------- ----TGA1                                                --------->MYB52(1)                 <------MYB46(1) ----HVH21                                              --------->ZAT14                     <------MYB83 >O2                                                    <---------ZAT14                     <-------- >bZIP60(2)               <------ZmHOX2a(2)  <----------ID1--------->ANAC58               <--------P >ANAC46        ---------->DOF2  <---------MYB46(3)     <---------WRKY38(1)        <------ZmHOX2a(1)   ccaaaggtttgagcccctaaaagatgcgatccaattggttcgaaattgagacaagtagtgaacggaacggatcggattgagagaaggatagagttggttc  5460300                                                                                                    <                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                              <------                                                                                            <--------                                 ----------->GT1                                           <-------TEIL                           *TSS<---------LBD16                                           --------->ARR14(2)                           <-----------HVH21                        --------->AHL20(2)   <---------GLK1(2)                      ------->TEIL                                  <---------AHL20(2)   <---------ARR14(2)                      --------->SPL7                   <---------ANAC55(2)         ----------->RAV1(2)              --------->ARR14(2) ------->GAMYB         --------->ANAC55(2)      ----------->HVH21<---  --------->ANAC58  <---------SPL7         <----------DOF2          --------->AHL20(1)   --------->ARR11(1)  --------->ANAC58 <---------ANAC58       <---------ANAC58         --------->AHL20(2)  ----------->ARR10 --------ARR14(2)  <---------ANAC58   <------------CBF <---------ANAC46 --------->AHL20(2)--------->ARR14(1) ------->ARR14(2) --------------->AtSPL8  <---------ANAC58   --------->YAB1     --------->WRKY12----- -DEAR3(2)    <---------ARR14(2)--------->ANAC46       <---------ANAC58 <---------AHL20(1)--------->CCA1(2) -MYB46(3) <---------GLK1(2) <---------WRKY12          <---------ANAC58 <---------AHL20(2)--------->GLK1(2)   ggagacgcagacagaatttctgcgtaccccttcaacggaaaattgcttttcagttttgcgtaatcacaaattaattaattcgatgacctgagattcggcg  5460400                                                                                    --------->YAB1                                                                                ----------->GT1                                                                             <---------ANAC55(1) ---------KAN4(2)                                                            <---------ANAC55(2) ------->GT1                                     ------>MYB46(1)             <---------O2 ---->LBD16           --------->ZAT14       >>>>>>>>>>WRKY6                  <---------ANAC58 -----MYB46(3)        <---------ZAT14       >>>>>>>>>>WRKY11                 <---------ANAC46 ----ANAC46       --------->ANAC46         --------->WRKY38(1)               <---------ANAC58       - ---LBD16         --------->ANAC58         --------->WRKY12            *TSS <-------TEIL           -- -DEAR3(1)        --------->ANAC58----------->TBP------>MYB83         --------->ANAC58        ------- ---NtERF2      <-----------GT1 --------->AHL20(2)<---------ALFIN1    --------->ANAC58        ------- ->NtERF2       <---------ALFIN1<-----------TBP<---------MYB59        --------->ANAC46 --------->YAB1   ggtataatccagtgttttccaccctacagtaagtttatatataagttgacctacacatttagtcaaacttgcaagcgatacgtggataatagtaaacctt  5460500                                                                   --------->ARR14(2)                                                                   <---------GLK1(2)                                                                 --------->LBD16                                                               <---------LBD16                                                              --------->MYB52(1)                                                              -------->P                                                          <---------HSFC1(2)                   <-----                                                          --------->HSFC1(2)                   ------                                                          --------->At4g35610                  <-----     --------->ANAC46                                <---------HSFB2a(2)                       ------ -------->TOE2(3)                  --------->ZAT2    --------->HSFB2a(2)                      ------- ------->YAB1                      <---------ZAT2    <---------HSFC1(1)                       <------ -->TOE1(3)                     <---------LBD16      ------>ZmHOX2a(1)              <---------------- -->TOE2(3)        ----------->GT1--------->LBD16    --------->HSFC1(1)            --------->At4g35610   aacataaacgacatcgttctccagtaaaaatagacccggctcgatggctcgagtcctagaagcttaccgggttctctcatcaaactgctccattcggata  5460600                                                           <----------DOF2                                                       <------NtERF2                                                     --------->O2                <---------MYB52(1)                                                     <---------O2                --------->At5g28300                                                <------NtERF2                    --------->DOF5.7(2)   <---------ALFIN1                            ------>NtERF2                    <---------DEAR3(2) -----TaMYB80                                  <---------RAP2.6(3)              ----------->GT1 --->CCA1(2)                                  --------->ATERF1(2)               --------->LBD16 ----GLK1(1)                         --------->ANAC46<---------DEAR3(1)        <---------ATERF1(2) --->GLK1(1)                       ---------->DOF2 <-----------HVH21           --------->ATERF1(2) -->ARR14(2)                 <---------ATHB12 <---------ATERF1(2)             <---------LBD16 ---ARR14(2)                --------->ANAC58  --------->DEAR3(1)             --------->LBD16        < -AG                        --------->ANAC58 <---------RAP2.6(2)             ------>NtERF2    <------   tacttccactctcaagtctcactccctcacaatcaattcaagcgattgccgcccgtcgtcgctttcaaatttgttcttccgccggtaactaattctcttt  5460700                                                                               <----------DOF2                 <----------DOF2       <------------------------ANAC81        <---------ANAC58                <---------ANAC58      <------MYB83                            <---------ANAC58  --------->WRKY45<---------ZAT14     <------MYB46(1)                 ------>ZmHOX2a(1)  --------->WRKY38(1)              <---------MYB52(1) <---------ANAC58--------->HSFB2a(2) ----------DOF2 <---------ANAC58  <---------SPL7      <---------ANAC58--------->LBD16  --------->WOX13(1) ----DOF2  <----------DOF2     ------>ZmHOX2a(2)  <---------MYB52(1)  <---------HSFB2a(2) --------->TOE2(3)   cgctttgactacgcttttgcttcactgcttcgatctcgttcggtttccttctgtttgcttcttcagaaattcctcgaattgcttttgatcaatctcaact  5460800  Previous    Next  AGI:  At1g15880.1    Description:  GOS11 (GOLGI SNARE 11); SNARE binding. Identical to Golgi SNARE 11 protein (GOS11) [Arabidopsis Thaliana] (GB:Q9LMP7); similar to GOS12 (GOLGI SNARE 12), SNARE binding [Arabidopsis thaliana] (TAIR:AT2G45200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44283.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) Range:  from: 5458529    to: 5460327    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g15885.1    Description:  unknown protein Range:  from: 5460471    to: 5461275    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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