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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                         --------->YAB1
                                                                                        --------->ICU4
                                                                   --------->ANAC58     <---------ATHB51
                                                                   --------->ANAC58     <---------ATHB12
                         ------>ZmHOX2a(1)               --------->GLK1(2)         --------->ANAC58
                        --------->TOE2(3)               <---------ARR14(2)         --------->ANAC58
                  --------->TOE2(3)                     <---------GLK1(2)        ---------->DOF2   -
--->TOE2(3)     ------->TEIL                            --------->ARR14(2) <---------ICU4<--------ATHB1
 
catcccaatttccattgtgaacctcatcctcaaaatacttcatattgaagaaaaacccagattcttgttcaagcctgaacatgacaaagcaataatgcat  5420200
                          <------MYB46(1)
                          <------MYB83
                          ----------->GT1
                         <---------MYB46(3)
                        <---------MYB52(1)   <---------GLK1(1)
          --------->At4g35610          --------->TOE1(2)
         <---------ARR11(3)       --------->MYB59
  ------>MYB46(1)      <---------At4g35610   --------->GLK1(1)
  ------>MYB83         <-------GAMYB <------ZmHOX2a(2)
 ----------->RAV1(1)  --------->MYB52(2) --------->ANAC58
 ================================RAV --------->CCA1(2)
------->GAMYB         <---------MYB46(3) --------->ANAC46
--------->AtMYB61    <-----------RAV1(2) --------->ANAC58                               <-----------GT1
-------->MYB46(3)  <-----------HVH21--------->AGP1        ---------->DOF2           <----------DOF2
 
taaccaacacaagagctaaacaggtcagttggtaaattagatccaaggaaatctacagagcaaaagagacatacttgtgaacagtctctttaaacttctc  5420300
                   --------->ANAC58
                   --------->ANAC58
                <------ZmHOX2a(2)                                              <-----------GT1
               <---------ARR11(3)                                          <----------DOF2        --
               --------->ARR11(3)                                    ---------->DOF2        <-------TEIL
      --------->GLK1(2)                                           ------>ZmHOX2a(1)      --------->At4g35610
  <---------HSFB2a(2)             --------------->AGL15          --------->TOE2(3)       <---------At4g35610
  --------->HSFB2a(2)       --------->ZAT2                       --------->TOE1(3)     <-----------RAV1(2)
 
ttcatcgagaaactgtaagatcaagaaaacgagctctctactaagagaagacatgttttctctcacttccttaaaagacttttttctaactcagatgcac  5420400
                      ------>ZmHOX2a(2)
                    --------->ARR14(3)
                    <---------AGP1
                    <---------ARR11(3)                             <---------------AGL15
                    <---------ARR14(3)                             --------->LBD16
        ------>MYB83--------->AGP1                                --------->HSFB2a(2)
        ------>MYB46(1)                                           <---------HSFB2a(2)
      <---------MYB59<------ZmHOX2a(2)                            <-----------------AGL1
     --------->MYB46(3) <---------------------WRI1                --------------->AGL15
    -------->P--------->YAB1    <<<<<<<<<<<<<<<<<LFY   --------->ARR14(2)
   --------->MYB52(1)--------->CCA1(2)                <---------CCA1(2)         --------->AHL20(2)
  ------->GAMYB     --------->ARR11(3)           --------->At4g35610            <---------AHL20(2)
 <---------MYB52(2) --------->ARR14(2)           <---------At4g35610 <---------GLK1(2)   --------->ANAC58
 --------->MYB46(3)<---------CCA1(2)      <------NtERF2<---------ARR14(2)<---------TOE2(3)  --------
 <---------MYB111(1)<---------ARR14(2)    <---------RAP2.6(3)    ----------------->AGL1  --------->ANAC46
------->MYB46(3)  ----------->ARR10      --------->RAP2.6(2)     <-----------------AGL1  --------->ANAC58
 
aacaactaaccaaactatcaccagatctgcaatataaacaatggccgaaatgagctcaaatctgagtttccagattatggaaattaaaaaacacgaaaag  5420500
                                                     --------->HSFC1(2)
                                                     <---------HSFB2a(1)
                                                     <---------HSFC1(2)
                                                     --------->HSFB2a(1)   ------->GAMYB
                                                --------->HSFB2a(2)       <----------ID1
                                                <---------HSFB2a(2)      --------->RAP2.6(3)
                                         <---------ICU4                 <---------DOF5.7(2)
                                         --------->YAB1                 --------->MYB52(1)
                                         <--------HAHB4           --------->ZAT14
                                        --------->ICU4            <---------ZAT14                 <-
                                        --------->AHL20(2)   <---------CCA1(2)     ---------->DOF2--
                                 --------->ARR14(2) <-----------ARR10<---------At4g35610        ----
             ----------->GT1     <---------ARR11(3)<---------GLK1(2) --------->At4g35610 <------ZmHOX2a(1)
-->DOF2   ---------->DOF2       <---------CCA1(2)--------->LBD16  <---------At4g35610   ----------->GT1
 
agaagttagaaatgaaagctaaaaacttggaacctatatctgaataattatccagaaacttcgcatctctgcagataacggcaaaaaaaagaggaaattt  5420600
     ------>ZmHOX2a(1)                                                        <---------ICU4
     --------->LBD16                                                          --------->YAB1
     <---------------AGL15                                                   --------->ICU4
     <---------HSFB2a(2)                                                  --------->AHL20(2)
     --------->HSFB2a(2)                             <-----------GT1      <---------AHL20(2)
    <---------LBD16      <---------AHL20(2)    <----------DOF2            --------->AHL20(1)
    <-----------------AGL2                  --------->GLK1(2)            --------->AHL20(2)  -------
    <-----------------AGL1<---------AHL20(2)--------->ARR11(3)     --------->ANAC58   --------->DAG2
--------ARR11(3)         --------->AHL20(2) <---------ARR11(3)     --------->ANAC58 ---------->DOF2
------->ARR11(3)        *TSS               <---------GLK1(2)      --------->DAG2 --------->YAB1
----->MYB59       ----------->GT1      ---------->DOF2           ---------->DOF2<---------YAB1   ---
 
aggtcttcctggaattggaagatgtgaatttaatagcttaaaaaaagaatctttttttactacatgaaaaaagcaaattaattatcagaaagggggatga  5420700
                                              --------->ARR11(3)
                                              <---------ARR11(3)                               <----
                                             --------->AHL20(2)                              -------
                                           --------->AHL20(2)                               --------
                                         --------->AHL20(2)                                 <-------
                                         <---------AHL20(2)                               ----------
                                   <------ZmHOX2a(1)                                   --------->ANAC58
   --------->DAG2                  ----------->GT1           --------->ANAC46    --------->MYB52(1)
  ---------->DOF2   --------->DAG2<----------ID1       --------->YAB1       ========================
---->GT1      --------->LBD16  ---------->DOF2--------->AHL20(1)    --------->At4g35610--------->ANAC58
------>AHL20(2)    ---------->DOF2----------->GT1      --------->AHL20(2)   ----------------->AGL3
 
aaaaataaagcaaaacccagaaaaaagtttgggcaaaaggataaaaaaatatatacaataaaactcgaaacagctagattccattaacagaggcaacaaa  5420800
                          ----------------->AGL3
    ---------->DOF2     --------->ANAC46
-----TOE2(3)     --------->At4g35610                                               --------->ALFIN1
--->DOF2         <---------At4g35610       <------ZmHOX2a(2)                       ----------->HVH21
->MYB46(3) <---------ANAC46   ---------->DOF2                               ---------->DOF2
--MYB52(2) <---------ANAC58<---------------AGL15          >>>>>>>>>TBF1   --------->ANAC58       ---
->RAV1(1)  <---------ANAC58--------------->AGL15       >>>>>>>>>TBF1      --------->ANAC58<---------WOX13(1)
===========================================MADS_MADS>>>>>>>>>TBF1 ----------->RAV1(1) <---------WOX13(1)
 
ggtagaagaaagaagcgtgaagcttactcaccataaagagagagagatcgatgaagaagaagaagaagaccacagagacgaaagaggtgatggattgatt  5420900
                                         --------->ANAC58         <<<<<<<<<TBF1
                  ----------->GT1  ---------->DOF2    <---------AHL20(2)
     <----------DOF2      ----------->GT1--------->ANAC58---------->DOF2
------------>AtSPL8    ---------->DOF2 ---------->DOF2--------->AHL20(2)
 
tttggactctttttctctctatcgaaaaaaggaaacttgaaagaaagcaaaactaaattaaaaagcttcttcttctctctctctctctctctctctatct  5421000
                                                                   --------->YAB1
                                                                  <---------YAB1
                                                                 --------->AHL20(2)
                                                                 <---------AHL20(2)
                           --------->CCA1(2)                  <---------ARR11(3)
             <-----------GT1      <---------LBD16             --------->ARR11(3)
           <-----------GT1--------->ARR11(3)          --------->ARR14(2)                         ---
        --------->ARR14(2)<---------ARR11(3)          <---------ARR14(2)               --------->ATHB12
   --------->DAG2      --------->HSFB2a(2)         --------->HSFB2a(2)         ----------->HVH21 <--
  ---------->DOF2      <---------HSFB2a(2)         <---------HSFB2a(2)      --------->DAG2     <----
 
agagaaaaagggattttctctctcttcgagatatatatacggacattaaaacttgcagaaatggagattttaataagagaaggtgacagataattggatg  5421100
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AGI:  At1g15750.1   
Description:  TPL/WSIP1 (WUS-INTERACTING PROTEIN 1); protein binding. similar to TPR1 (TOPLESS-RELATED 1) [Arabidopsis thaliana] (TAIR:AT1G80490.2); similar to TPR1 (TOPLESS-RELATED 1) [Arabidopsis thaliana] (TAIR:AT1G80490.1); similar to TPR4/WSIP2 (TOPLESS-RELATED 4) [Arabidopsis thaliana] (TAIR:AT3G15880.2); similar to CTV.2 [Poncirus trifoliata] (GB:AAN62336.1); similar to hypothetical protein OsJ_008151 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24668.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66747.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR0
Range:  from: 5414812    to: 5420625    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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