Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->YAB1                                                                                           <---------ICU4                                                                                          <---------ATHB12                                                              ------>ZmHOX2a(2)        --------->LBD16                                                              ========================HOX2a_HOX2a                                                       --------->GLK1(2)             ----------------                                                       --------->ARR14(2)         <---------HSFB2a(1)                                                       <---------ARR14(2)         --------->GLK1(1) ---->ARR11(3)                                         <-----------ARR10          <---------GLK1(1) -----ARR11(3)                                        <---------GLK1(2)        <------ZmHOX2a(1)-----   tatggtttagcaatgttgtctatacactcagaaaaaaacaattccagtgaaattcagaatctgatcgctcaaaattgagcaggaatttccgaatcatgaa  5409600                                                                                               ------                                                    <------NtERF2                              <-----                                        <---------YAB1                                        <------                                    <---------MYB52(1)--------->GLK1(1)                       <------                                   --------->LBD16 --------->LBD16                            <------                                 <---------LBD16   <------NtERF2        <---------ARR11(3)    -------                          <-----------RAV1(2)      <---------RAP2.6(3)  --------->ARR11(3)    -------                 -------->P   --------->ARR14(2)  --------->RAP2.6(2)   <-----------ARR10     -------   <---------GLK1(2)      <---------LBD16--------->YAB1         --------->ETT(1)             <------- ->AGL1       <---------DAG2  <---------ARR14(2) <---------LBD16<---------ANAC46             -------- -->TEIL   <---------ALFIN1  <------ZmHOX2a(1)   <---------ANAC46 ----------->GT1  ----------->RAV1(1)   ccctagattagcctcaccttaccagagcccaggaacccggtgattatagtggccggaattcgattgtcgggcaaaatctcactggcaacatcgaagatat  5409700                                                                               --------->LBD16                                                                              <------NtERF2                                                                              --------->ANAC58                                                                             ------>NtERF2                                                                             --------->At4g35610                                                                             <---------LBD16                                                 --------->HSFB2a(1)         <---------At4g35610                                          <---------ANAC46                  <---------ANAC46                                       <---------DEAR3(1)    <-----------HVH21--------->ANAC58     --------->At4g35610               <---------ANAC46   --------->At4g35610--------->LBD16 --->ARR11(3)                         <---------LBD16     <---------At4g35610<------NtERF2 ----ARR11(3)                        ------->GAMYB       ------>NtERF2      --------->DEAR3(1) ---CCA1(1)                         <---------DEAR3(1)  <---------DEAR3(1) --------->RAP2.3(1) ---GLK1(1)                         --------->MYB46(3)------>NtERF2        --------->ATERF1(1) ---RVE1(1)                       --------->MYB52(1) ----------->HVH21     --------->DEAR4(2) -->GLK1(1)                      <---------WRKY38(1) --------->DEAR3(1)    <------NtERF2 -->CCA1(1)                    --------->ANAC58  <---------HSFC1(2)       <---------DEAR4(2) -->RVE1(1)                    --------->ANAC58<---------GLK1(2)      --------->DAG2 --ARR11(3)            <------ZmHOX2a(1) <------NtERF2<---------ATERF1(1) <---------RAP2.3(1)-------- ->ARR11(3)  ------->GAMYB   --------->At4g35610 <---------HSFB2a(1) ---------->DOF2       ----------   cttcatcatctacaacggcgagcgaggaatcagaggcaacggcggagtggaatctccgacggctgtcagagtaaagcgccgcggaatagaacgatgacga  5409800                                                                                                <----                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                  ---------->DOF2                      <---------ZAT14             <---------MYB46(3)            <---------YAB1  <----                      --------->ZAT14           <---------MYB52(1)          <---------------------WRI1                      <---------SPL7         --------->DEAR3(2)         --------->LBD16    ---------- --->STF1            <----------DOF2         --------->MYB46(3)        <---------LBD16  --------->ANAC58 ->TGA1        <-----------RAV1(1)         --------->MYB52(1)         <---------LBD16   --------->ANAC58   cttcgttctgagggaaactgtggctgtactgagcctagcagaagcgaaccgatggttcaaggaggtattagctcggggaacgatgaaagcaaggaaagtc  5409900                                                          --------->HSFC1(2)                                                          <---------HSFC1(2)                                                          --------->HSFB2a(1)                         <------NtERF2                   <---------TOE2(3)                        ------>NtERF2<---------TOE2(3)   <---------TOE1(3)                  <--------                       --------->RAP2.3(2)               <---------------AtSPL3   *TSS      <--------                       --------->RAP2.3(3)          <---------ANAC46            <-------GAMYB -----ANAC58           --------->DEAR3(1)   <---------TOE2(3)<-------TEIL   ------------>AtMYB77 -----ANAC58         <---------ATERF1(1) <-------TEIL ----------->HVH21   --------->CCA1(2)--------->STY1(2) >DOF2            ------->GAMYB<---------YAB1 <---------ARR11(3)       <---------ZAT6      <---------STY1(2)   gtggctatgtcgagtttcaacagcgtcgccattgttattagggttcaaggtattctgtgaaggttcggacatagagatagacagttagacacttgctagc  5410000                                                --------->MYB52(1)                                              <---------MYB55(2)                                              --------->MYB46(3)                                             --------->AtLEC2                                        --------->ARR14(2)      <---------ANAC58                                        <---------ARR14(2)      <---------ANAC58                   <-----------GT1  <---------LBD16        --------->CCA1(2)      <-----------GT1 <------------CBF--------->LBD16 <---------ETT(2) -ANAC58 <---------LBD16           <-----------GT1 ------->GAMYB<---------ANAC46 -ANAC58--------->ANAC46          <-----------GT1 --------->MYB46(3)          ---------->DOF2--------   ttcagaatttacgcggtttttttacattgttttttttttccggttccatccaacggtcgagatttgacttgtattatttcgaaagaaaaacaaaatggta  5410100                                                                        --------->WOX13(1)                                                                      <---------AHL20(2)                            ---------->DOF2                        --------->AHL20(2)                           --------->YAB1                          <---------AHL20(2)                          <---------YAB1                           --------->AHL20(1)                       <---------YAB1                              <---------ARR11(3)                      <---------AHL20(2)                           <---------AHL20(1)                      --------->AHL20(2)--------->ARR11(3)    --------------->AGL15          <-------TEIL                  ----------->GT1       <---------ARR11(3)    =======================================                ------------------------>ANAC81            <-----------GT1 --------->YAB1 <---------ANAC46 --------->TOE2(3)<------ZmHOX2a(1)------->MYC3     <---------YAB1 --------->ARR11(3)     <---------ANAC58 --->GT1      ---------->DOF2      <-------MYC3     --------->ICU4--------->AHL20(2)      <---------ANAC58   aaacataaatgtatgaaaaaggattaaaattatagcacatgagatattgtagtcatttttgttacaaaatatattaatcagaaattcagaatgcgtgcat  5410200                                                                         --------->bZIP60(1)                                                      --------->AHL20(1) <---------GLK1(1)                                            --------->YAB1    <------NtERF2        --------->HSFB2a(2)                                         ----------->GT1     ------>NtERF2         <---------HSFB2a(2)                                  <---------------AGL15     <----------ID1         --------->HSFC1(1)        <-------TEIL              ------>ZmHOX2a(1)   --------->ARR11(3) --------->GLK1(1)     --------->At4g35610         --------->TOE2(3)   --------->AHL20(2)  <---------bZIP60(1) =================================================MADS_MADS <---------ETT(2)      <---------ANAC46   caaaattagatgcaaaacttgaagaagagcataatcctaaatctagttataacaaatatatggcgacaatttctgatatcagtttcgagaattagtttgt  5410300                                                                                   --------->ATHB12                                                                                   <---------AHL20(2)                                                                                  <---------YAB1                                                                               <---------YAB1                               <---------YAB1                                 --------->AHL20(1)                             ----------->GT1   --------------->AGL15          <---------AHL20(2)                         --------->ARR11(3)    <---------HSFB2a(2)            <---------AHL20(1)                         <---------ARR11(3)    --------->HSFB2a(2)           --------->YAB1                    ------->GAMYB   <---------AHL20(2)      <-----------HVH21<---------AHL20(2)                  --------->At4g35610<---------YAB1        ----------->GT1   --------->AHL20(2)                 ----------->RAV1(1)--------->AHL20(2)  <---------ARR11(3)  --------->ICU4   <-------                --------->ETT(2)----------->GT1<---------------AGL15 <---------ANAC46        <-------   tttgcaactgtattgatgtcaacagaagataatgtgattaaaattgtttctaaaacaagaactgtcaaatttcgagtaattatatttattgattttcttg  5410400           <---------TOE1(3)           <---------TOE2(3)      <---------ARR14(2)             <---------AHL20(2)      --------->ARR14(2)            <---------AHL20(2)     <---------CCA1(2)     <---------At4g35610     <---------GLK1(1)     --------->At4g35610                                                   ----     --------->GLK1(1)   <---------ICU4      <-------GAMYB                                       ---- --ANAC58  <---------TOE1(2)        --------->AHL20(2)          ----------->GT1---------->DOF2 ------ --ANAC58  <---------TOE2(2)        <---------AHL20(1)       <-----------RAV1(1)             <-------   tttatgcatatccaaggttactcttcatcatctcacaattttttttcggttataaactaaaaaatgtggctaatttgaatataaagtttgtatatttaaa  5410500  Previous    Next  AGI:  At1g15730.1    Description:  PRLI-interacting factor L, putative. similar to PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17) [Arabidopsis thaliana] (TAIR:AT1G80480.1); similar to Os02g0800000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048412.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66764.1); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495) Range:  from: 5407396    to: 5409982    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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