Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------MYB46(3)                                                         <---------WOX13(1)              --------->ANAC58                          <---------AHL20(2)       --------->DAG2                        --------->ANAC58                       --------->AHL20(1)        ---------->DOF2                      <------NtERF2 ---------HSFB2a(1)    <---------AHL20(1)  <-------TEIL  <---------YAB1            <------ZmHOX2a(1) -------->HSFB2a(1)   --------->AHL20(2)  --------->CCA1(2)                      --------->ALFIN1 ------>GT1         --------->AHL20(2)   <---------ARR14(2)                     <------ZmHOX2a(1) ---->GT1         --------->AHL20(2)     --------->ARR14(2)               ----------->RAV1(2)       -   gaaaattcttgatcacaaaaaaaaatatataatccaaattgcagatacagagaaaggtgattgttgaaattcgaaaacctgaggaggaggcaagtagcgc  5186600                                                          ---------->DOF2                                                     <---------ATERF1(1)                                                     <---------ORA47(2)                                                    <---------DEAR3(1)                                                    <---------DREB2C(2)                                                   <------NtERF2                                                   --------->ATERF1(1)                                                   <---------ABI4(1)                                                  <---------ORA47(2)                                                  ------>NtERF2                                                  <---------RAP2.3(1)                                                 <---------DEAR3(1)                                                 <---------RAP2.3(3)                                                 <---------DREB2C(2)                                  <---------ANAC55(2)<---------MYB46(3)            --------->MYB52(1)                                  --------->ANAC58<---------DEAR3(2)           --------->At4g35610                                  --------->ANAC55(2)<---------DEAR3(2)        <---------At4g35610          ------>NtERF2--------->MYB59           <---------At1g77200    <---------LBD16         --------->ANAC46         --------->ANAC55(1)<---------DEAR4(2)<---------ANAC46         --------->ANAC58         --------->ANAC58<---------ERF1  <---------HSFB2a(1)         --------->ANAC58<------ZmHOX2a(1)------->TEIL<------NtERF2    <---------ANAC58       <---------ATERF1(1)--------->MYB52(1)   <-----------HVH21  --------->HSFB2a(1)              -- --------->DOF2<---------ATHB12  <-----------------------TaNAC69(2)    <---------ANAC58   <------ZmHOX2a(1)   cagagagcgagacgccaatcggtgttaggaacggagacgtaatgaagctcgtcggcggtgcaaagagaaggtttcgtggggagcttaacagaggaagaag  5186700                                   --------->MYB52(1)                                --------->bZIP60(1)                                --------->ANAC58                                <---------bZIP60(1)                                --------->ANAC58                             ----------->HVH21                             ----------->TGA1                           <---------ANAC58                           <------MYB46(1)                                                       <---                           <---------ANAC58                                                     -----                           <------MYB83                   --------->At4g35610                  <-----                          <---------MYB46(3)              <---------At4g35610            ============                          --------->MYB52(2)          <---------bZIP60(2)                <------ZmHOX2a(1)                          --------->MYB46(2)          <---------DEAR3(1)             <---------MYB46(3)                         --------->SPL7            ----------->TGA1                 --------->ALFIN1           ----------->GT1<---------DEAR3(1)       ----------->HVH21             <---------DEAR3(1)   --------->ARR11(3)   <---------MYB52(1)<------ZmHOX2a(1)            --------->ALFIN1  ============ -------->DOF2         <---------SPL7 --------->TOE1(2)  --------->ALFIN1    --------->CCA1(2)<------   agaaagctctcggtcgtaacaacgtcgttcggtgacgaaacgaaggagtagtagtgacggtgctgatggaacggtggagatagacggtggaggaagcccg  5186800               ------>ZmHOX2a(2)              <---------GLK1(1)              <------ZmHOX2a(2)              --------->GLK1(1)             <---------AGP1             <---------ARR14(3)             <---------ARR14(2)             <-----------ARR10             --------->ARR14(3)             --------->ARR11(3)             --------->ARR14(2)         --------->At4g35610    --------->At4g35610    --------->ZAT2    <---------At4g35610                             --------->ANAC58 ----------->ARR10                                  --------->ANAC58 ---NtERF2  <---------ARR14(1)                     --------->SPL7                      <---------ANAC58 ---->LBD16 <---------CCA1(2)                  <---------------AtSPL3       <<<<<<<<<<<<<<<<<LFY ----DEAR3(1)<---------ARR11(3)                <---------------AtSPL8----------->GT1   <---------ANAC46 ====================HOX2a_HOX2a          <---------ZAT18        <---------ARR14(2)    <---------ANAC58 =====================HOX2a_HOX2a     --------->ALFIN1           --------->ARR14(2)   <------NtERF2<- ---LBD16<---------At4g35610       <------NtERF2 <---------SPL7  <---------GLK1(2)   <---------MYB46(3)   gcgaagagctgagcggatctccaagggaaattgtggaggcatggtggacatggtacggactctggcagatttggaaaaaaacaatggtggctcggtttca  5186900                                          --------->REM1(2)                                         --------->ALFIN1                                        <-------PIF5                                        <-------MYC3                                        ------->MYC3                                        <-------MYC2                                        ------->PIF5                  ------>ZmHOX2a(2)     <-------MYC4                 <------ZmHOX2a(2)      ------->MYC4                          <---------O2                <---------ARR14(3)      ------->MYC2                          <---------TGA1a                <-----------ARR10      <---------TGA1a                        --------->TGA1a                --------->ARR11(3)     --------->TGA1a                        =================bZIP_DOF                <---------ARR11(3)     --------->ANAC46                       --------->O2                --------->ARR14(3)     <---------O2                           --------->ANAC55(2)             <---------TOE2(3)         --------->O2                           <---------ANAC58             <---------TOE1(3)   --------->LBD16                       <---------TOE2(3)   <---------ANAC46             <---------HSFB2a(2)                  *TSS     <---------ANAC58   <---------ANAC58            <---------LBD16                      <---------WOX13(1)            ---   <---------ANAC58           <-----------GT1  --------->CCA1(2)  --------->ATHB12             <----- --------->LBD16--------->ARR14(2)  <-------TEIL                 <---------YAB1     <----------DOF2 ------>NtERF2  <---------ARR14(2)<---------MYB52(1)             --------->ICU4 ----------->HVH21 --- --------LBD16 <------ZmHOX2a(1)--------->HSFB2a(2)        --------->ICU4     <---------ANAC55(2) ---   ctccggcgtgtttttaaggatcttcattcattttccggtacacgtggagagacgaccagtgatgttgatgattgacgaagacgtgactttcttattttga  5187000                                                                                    <-------GAMYB                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                  <------------------                                                                                 <---------ANAC46                                                                               <---------MYB46(3)     --------->AHL20(1)                                                      <---------ANAC58     --------->ARR11(3)                                                      <-------GAMYB     <---------AHL20(1)    ---------->DOF2                                   <---------ANAC58       < ------>ANAC58       <------------CBF                                       <---------MYB46(3)     <- ----WRKY18(1)     --------->ARR11(3)                                      <---------AtMYB61       <- ------>ANAC58 ----------->GT1          <---------At5g28300               <---------MYB52(1)  ------- ------>RAP2.6(2) --------->YAB1       <-----------GT1                   <----------DOF2      -------   ccgcaaatattttgggccagtgatattgcaaaagcccaaatttacagtgagagtttttttttttgtttctctggcctttggttgtgcgttgaagacaagg  5187100       <---------ZAT6 ---WRI1 ---------ARR11(3)                                                                                  < -----MYB46(1)                     --------->ATHB12                                                -- -----MYB83 --------->ANAC58 --------->YAB1                                                      ---- -->ANAC58  --------->ANAC58<---------ATHB12                     --------->AHL20(2)   --------->AHL20(2) -->ANAC58---------->DOF2 --------->WOX13(1)               --------->TOE2(3)        <---------GLK1(2)   aaggtattagtgtaaagcaaattttgtccaatcatcttgatttggaatttaagatgtgttatctcaaaaaaatatcaacaaaaccagattatatatcact  5187200                                                                                 --------->AHL20(1)                                                                                 --------->AHL20(2)                                                        --------->ANAC58         <---------AHL20(1)                                                        --------->ANAC58         <---------AHL20(2)                                                    --------->YAB1              --------->AHL20(2)                                                   <---------AHL20(2)      <---------AHL20(2)                                                   <---------YAB1          --------->AHL20(2)                        <---------MYB59           --------->AHL20(2)   <---------ICU4                      ------->TEIL                <---------AHL20(1)   --------->ATHB51             <---------AHL20(2)                   <---------AHL20(2)   <---------AHL20(2)     ------->TEIL    <---------CCA1(2)            --------->AHL20(1)   --------->AHL20(2) ---------ICU4--------->YAB1 --------->AHL20(2)  --------->YAB1       --------->ICU4  <-----------GT1 ------->ICU4--------->AHL20(2)             --------->TOE2(3)    --------->TOE2(3)   --------->AHL20(2) ----->YAB1 --------->AHL20(2)             ----------->GT1    --------->YAB1    <---------AHL20(2)   gataatgaaactaaatttataatgtatctaactaaatagctaaaaatgttaatataataagctatcatcttaattatttaaattaaatttactaatatac  5187300                                          --------->YAB1                                         <---------YAB1                                            --                                       <---------ICU4                          <---------------AGL15                                       --------->YAB1                         ----------------->AGL3                                      --------->ICU4                          <-----------------AGL3                                      <---------ATHB12                 <---------CCA1(2)<------ZmHOX2a(1)                           <---------ARR14(2)                    <----------DOF2        =============                   ---------->DOF2------>ZmHOX2a(2)        --------------->AtSPL8     <---------TOE2(3)         <---------ZAT6    --------->ARR14(2) <---------AHL20(2) <---------DAG2--------------->AGL15   taagcgagttagtgagaaatataaagtcagatttgatctaatcatcatattatttgtacatttagtacttttcttatctcactaaatttaggaaatattg  5187400                                                      <---------AHL20(1)                                                      --------->AHL20(1)                                                    <---------AHL20(2)                                                    <---------AHL20(1)                                                   --------->YAB1                                                 --------->AHL20(2)                                                 <---------AHL20(1)       <---------TOE2(3)                                                 --------->AHL20(1)--------->MYB52(2)            --------->AHL20(2)               <---------AHL20(2)  <---------MYB52(1)            <---------AHL20(2)              <---------AHL20(2)   <--------P                 <--------           --------->AHL20(2) --------->AHL20(2)--------->YAB1  <-------GAMYB              --------->AHL20(2) ---->ZmHOX2a(2)---------->DOF2          --------->WOX13(1)    <---------MYB46(3)    <-----------GT1 =====HOX2a_HOX2a           --------->YAB1  --------->AHL20(2)<---------TOE2(3)   <----------DOF2   atctaaaattgaatttaaaaaagaaaccaaaaataaaaactttcaattaaatataatattttttgtggttagttttgatgttttcttttacaattttata  5187500  Previous    Next  AGI:  At1g15060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73750.1); similar to Os01g0692600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043943.1); similar to hypothetical protein OsI_003298 [Oryza sativa (indica cultivar-group)] (GB:EAY75451.1); contains InterPro domain Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969) Range:  from: 5183602    to: 5186969    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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