Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ------>ZmHOX2a(2)     --------->ARR11(3)     <---------AGP1     <---------ARR11(3)     <---------ARR14(2)     --------->ARR14(2)    <---------CCA1(2)  <---------HSFB2a(2)  --------->HSFB2a(2)                                              <---------TOE1(3) -------ANAC58                                  <---------ALFIN1<-----------HVH21 -------ANAC58                             <---------ICU4      <----------DOF2 ----->HSFC1(2)                      --------->YAB1      <---------ARR14(2) ------HSFC1(2)                     <------ZmHOX2a(2)    --------->ARR14(2)                     <---- -----TOE1(2)<-----------GT1       <---------ARR11(3)  --------->HSFB2a(2)        <---------ALFIN1<-- --HVH21<----------DOF2            --------->ARR11(3)<---------LBD16      <---------AHL20(2)    <----   gcttctggatctttataacctctgagcaaacatccaagatcatcatcttcacaccttcggaaactctttcaggtattatatcgaacaccttgtgatcact  5168200   ------>MYB83                       *TSS------------>CBF   ------>MYB46(1)                --------->ANAC58   --------->MYB52(1)             --------->ANAC58                                                  < <---------MYB46(2)               --------->ANAC46                                          --------- <---------MYB59          --------->HSFC1(2)                                                <-------- <---------------AGL15    <---------HSFC1(2) <------------CBF                  <---------DAG2      <- ===============================================================================================MADS_MADS ------DOF2----------->HVH21 <---------At4g35610                              <-----------------AGL3< ---------GT1 <---------ANAC46    --------->ANAC55(2)           <----------DOF2<----------DOF2 ------ -----DAG2 ----------->TGA1  --------->At4g35610     <------------CBF<------------CBF       <--------   ttaccaaacagagatgacgagtagaagaagcatctcacgaaatttgcaattgacaaattgtaaacgctttgtattgtccaactttttatgggcctatctg  5168300                                                                       <-------TEIL        <----------DOF2                                         --------->AHL20(2)     <-----------GT1                                           --------->YAB1     <-----------------AGL1                                  --------->AHL20(2)    ---------->ID1                                     <---------AHL20(2) ---------DAG2            <----------DOF2        ----------->RAV1(1)  <-----------GT1 >ARR14(2)           --------->YAB1<---------AHL20(2)  --------->AHL20(1) ---ARR10            --------->AHL20(2)   <----------DOF2  --------->AHL20(2) --------DAG2       <---------ATHB12  <-----------------AGL1<---------AHL20(2) ----------DOF2 ------------>CBF   --------->AHL20(2)  <---------AHL20(1) ----->HVH21  ------>NtERF2     <---------ARR11(3)     --------->AHL20(2)    <---------TOE2(3) -ARR14(2) --------->RAP2.6(3)  --------->ARR11(3)  --------->YAB1--------->AHL20(2)   --------->At4g35610   acctttttctcttttcggcccaataaaacttttagattttatttcttttggcaacaataaatttaaaataatatacattatggaaaatcatctacaaaca  5168400          --------->AHL20(2)                 --------->ANAC58          <---------AHL20(2)                 --------->ANAC58      --------->AHL20(2)               <--------P--------->ANAC58     --------->AHL20(2)              <------MYB83--------->ANAC58                   --------->AHL20(2)   <----------DOF2                   <------MYB46(1)                        <-----------GT1  --------->TOE1(3)                 <---------TOE2(3)--------->ANAC58   <---------YAB1      <--------  --------->TOE2(3)                 --------->MYB59  --------->ANAC58<---------YAB1 <---------AHL20(2)   aaaacctttaaattaaaaaactcacatgttaatgcaattaggttagtaagcaagcacgtcttgacaaaaatgttattgttacacatttaaaaattcacat  5168500                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                                     --------->TGA2(2)                                                                                    <---------ATERF1(1)                                                                                    <-----------HVH21                                                                                    <-----------TGA1                   --------->YAB1                   --------->AHL20(2)             <---------ANAC58                   --------->ANAC58             <---------AHL20(2)                 <---------ANAC58                   --------->ANAC58            --------->AHL20(2)      <----------DOF2                   --------->ANAC55(2)         <---------AHL20(2)     ------>ZmHOX2a(2)                   --------->ANAC55(1)     --------->AHL20(2)        <------ZmHOX2a(2)      <--------     --------->ANAC58                   <---------ICU4              <---------ARR11(3)     *TSS     --------->ANAC46                   --------->YAB1              --------->ARR14(2)    --------->WOX13(1)     --------->ANAC58   --------->ICU4 <---------ATHB51             --------->ARR11(3)   ------------ <-----------GT1   --------->ANAC46    <---------ATHB12             <---------ARR14(2)  ------------>CBF ---GT1           <---------TOE2(3)    --------->ICU4         ---------->DOF2 ---------->DOF2   <----   gttatacaagacaaaacataaacgtaatgttttgcagtcaaataatgaaataaatgaaataatacaaagggatctttatgtaaaggcgtcaccaattagt  5168600                                                                                         <---------HSFB2a(2)                                                                                        <---------LBD16                                                                               --------->MYB46(3)                                                                               <------NtERF2                                                              <---------MYB52(1)  <---------MYB52(1)                                                             <-------GAMYB    ------>NtERF2                    <---------ALFIN1                    --------->ATERF1(1)  <---------ALFIN1     <--                   --------->ZAT14                     ------>NtERF2         --------->DEAR3(1)   <--   --------->MYB52(1)                                  <---------ATERF1(1)  <---------MYB55(2)    ---  <---------ATHB51 <---------ZAT14               <---------ALFIN1           --------->MYB46(3)   <---  --------->ICU4   <---------ZAT18             ------>ZmHOX2a(1)           <---------At4g35610  ----- -ATHB12    --------->ANAC58       <----------DOF2    --------->DEAR3(1)   --------->At4g35610------- --->AGL15  --------->ANAC58      <---------ANAC58 --------->ANAC46       --------->ANAC46--------->LBD16 -----ZAT6  --------->ANAC46      <---------ANAC58------>ZmHOX2a(1)     ------>ZmHOX2a(1)--------->HSFB2a(2)   ggaaataatggagcaagccactacactcttcatattgctttccactctcctcctcgccgtctccgttgagtctcctcagccaccgctatttcccgatgaa  5168700                                     <---------ALFIN1                                   <---------ALFIN1                          --------->LBD16                                               --------->ANAC46                         --------->LBD16                                              --------->AtMYB61                        <---------LBD16    <---------ZAT2                             ------->GAMYB                       ------>MYB46(1)    --------->LBD16                             <---------ALFIN1       <-----------------AGL3       --------->LBD16                                  <---------MYB55(2) -------ARR11(3)       ------>MYB83--------->ANAC58                                  --------->MYB46(3) ---------ARR10        --------->MYB52(1)--------->ANAC46                           ------>MYB46(1) ------>ARR11(3)     --------->AtMYB61  <---------LBD16                             -------->P    --- ------At4g35610   -------->P      --------->ANAC46                               --------->DEAR3(1)< -->TEIL   <---------ARR14(2)      --------->ANAC58                          ---------->DOF2      --- --->DOF2  --------->ARR14(2)     <---------LBD16                   --------->ANAC46------>MYB83-----   gctctccccactaaatctggctacctcccggttaaacccgcacccggctcgtccatgttctatgccttctacgaagcccaagagccaaccacacctcttc  5168800                                                                                                 ----                                                                                               ------                                                 <------------ATHB5                           -------                                                 --------->ATHB12                             -------                                                 <---------ICU4                             ---------                                                 --------->YAB1                             ---------       --------->At4g35610                       -------->ATHB1                             ---------       <---------At4g35610                       <--------ATHB1                    <---------ZAT14     <---------ZAT18                            <---------YAB1                  <---------ANAC58 ----   --------->ANAC46                    <---------At4g35610                      <---------ANAC55(1) <---------ALFIN1              <---------PCF2   <---------ATHB51                <---------ANAC46 <--- --------->ZAT6             --------->ALFIN1    <---------ATHB12   --------->ZAT2  --------->REM1(2)- --->ZmHOX2a(1)           <---------ZAT2        --------->ICU4<-----------GT1   <---------ANAC58<---- <<<<<<GRF7 ------>ZmHOX2a(1) ----------->TCP11(1) <---------WOX13(1)   <-----------HVH21 <---------- -------->HVH21           --------->ZAT2     ------------>ATHB5    <---------ZAT2 --------->ALFIN1 <- ------>RAV1(2)<---------MYB52(1)<-----------RAV1(2)       <----------DOF2 ----------->RAV1(2)-------   ctgacactccgctcctcgtttggctccaaggtgggccaggctgctcttcaatgattggcaacttttacgagctcggtccctggcgtgtagtttcacgcgc  5168900                              --------->DEAR3(2)                              --------->HSFB2a(1)                              <---------HSFC1(2)                         --------->ANAC58                      ------>NtERF2 ------->RAV1(1)    --------->RAP2.3(1) >NtERF2            <------NtERF2 -->ANAC58         <---------ATERF1(1) -->ANAC46         ------>NtERF2 >ANAC58           --------->LBD16 >ANAC58          --------->ANAC46 >ANAC46      -------->P --------->ANAC58 ----->DEAR3(1)  <---------LBD16               <---------DAG2 ------ALFIN1<---------ALFIN1 --------->HSFC1(2) -------->DEAR3(1)<---------DEAR3(1)           --------------->AGL15                    ------>NtERF2 --NtERF2    --------->DEAR3(1)                <---------------AGL15            <---------At4g35610-- -GT1     --------->ANAC58  --------->ARR14(2) <----------DOF2             --------->ARR14(2)      -- --------ALFIN1 ------->GAMYB <---------HSFB2a(1)        <---------GLK1(1) <---------ARR14(2)      -- -->ANAC58--------->ANAC58  <---------ARR14(2)<-----------------AGL3<------ZmHOX2a(1)  --------->DEAR3(1)   cacagacctcgagcgcaaccccggcgcatggaaccgtctattcggactactttttgtggataacccaataggagtcggattcagcatcgcagcctcacaa  5169000                                                                                         ------>MYB83                                                                                         -------->P                                                                                         ------>MYB46(1)                                                                                         --------->MYB52(1)                                                                                        --------->MYB55(1)                                             --------->At4g35610                       ----------->HVH21                                             ------>NtERF2  <---------ANAC46           --------->DEAR3(1)                                     <----------DOF2        <---------ANAC58          --------->DEAR3(2)                                  --------->GLK1(2)     <---------GLK1(1)        --------->HSFB2a(2)                            <----------CDC5  <---------At4g35610            --------->HSFC1(2)                           --------->At4g35610          --------->GLK1(1)   <---------ZAT2        --------->ANAC46   <---------At4g35610    <---------O2              <---------HSFC1(2) ------->ANAC58           <---------DEAR3(1)--------->DEAR3(1)             --------->ANAC58 ------->ANAC58         <-----------HVH21--------->ANAC46   <---------ANAC58--------->ZAT2          - ------->ANAC46        --------->O2 <---------ICU4<---------ANAC46         --------->ANAC58         <   caagacatacccacaaatcagagacaggtcgctgagcatctttacgccgctctcgtggagttccttgaacaaaacccaagcttcgaaaaccgaccggttt  5169100  Previous    Next  AGI:  At1g14990.1    Description:  similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:BAB92466.1) Range:  from: 5167142    to: 5168238    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g15000.1    Description:  SCPL50 (serine carboxypeptidase-like 50); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 50 precursor (SCPL50) [Arabidopsis Thaliana] (GB:Q9M9Q6); similar to SCPL48 (serine carboxypeptidase-like 48), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G45010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42277.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 5168591    to: 5170061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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