Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->GLK1(2)     --------->ARR14(2)                   ------>MYB46(1)     <---------GATA12             <---------O2     <---------GLK1(2)            --------->O2     <---------ARR14(2)     <------ZmHOX2a(2)    --------->KAN1         --------->GATA12        --------->AtLEC2   --------------->ANT     <---------GATA12        ----------->GT1 --------->SPL7(1)         --------->AGP1 ------>MYB83                                        ------- ---------SPL1(1)          --------->ARR11(2) --------->ANAC58                            --------->YAB1 -------->SPL1(1)          <---------ARR11(2) --------->ANAC46                <---------GLK1(2) --------SPL1(2)           <---------ARR14(2) --------->ANAC55(1)             <---------RVE1(2) --------SPL7(1)           --------->ARR14(2) --------->ANAC58    --------->DOF5.7(1)  --------->GLK1(1) ------------>SPL14  <---------GLK1(1)  <---------MYB59         ---------->DOF2--------->GLK1(2)  --- -DOF5.7(1)          --------->GLK1(1)  --------->AtMYB61  ----------->GT1   --------->KAN1 ---------   ccgtacagattccgatgttagagaaatcagatcgagacgagaccaaacacgaaatgcaaaatggctaaaagagagagagagattctgagaaatcaaaaga  4891800                      --------->YAB1                      ----------->GT1                    <---------WOX13(1)                  --------->ATHB12             --------->ARR14(2)                                  --------->WOX13(2)             <---------ARR14(2)                                  <---------WOX13(2)             --------->GATA12            <----------ID1         --------->ATHB12             <---------GATA12            ----------->GT1       <---------YAB1                     <--         ------>ZmHOX2a(2) --------->DOF5.7(1)                <----------DOF2                     ---       <---------GATA12   <---------AHL20(3)                 <---------DOF5.7(1)                <---- -->DOF5.7(1)--------->RVE1(2)   <---------ARR11(2)       ---------->ID1       ------->GAMYB  <------MYB83 ------>YAB5<---------CCA1(2)    --------->ARR11(2) <---------AHL12(1)      --------->WOX13(1)<------MYB46(1) ->DOF2--------->RVE1(2)  --------->AHL20(3)        --------->AHL12(1)   --------->TOE2(3)   --------   cgattagatgatccaaatctcgattgataaaaatggattcagaaggaaaaacaaaaatttgtctctttattgaaacatcaatcgccaaaacaaatttggt  4891900               <----------DOF2              ------>ZmHOX2a(2)             <------ZmHOX2a(2)             <---------RVE1(1)            <---------RVE1(2)            <---------ARR14(2)            <---------GATA12            <---------ARR11(3)            --------->ARR11(3)            --------->ARR14(2)                                               ------>ZmHOX2a(2)            --------->GATA12                                                --------->At4g35610            --------->AGP1                                                  <---------At4g35610  ----            <---------AGP1                                                 <---------RVE1(2)    <----           <---------CCA1(2)                                               --------->GATA12    <-----           <---------At4g35610                                             <---------GATA12    ------    ---------->DOF2                                                  <---------YAB5            <----- -------At4g35610   --------->GATA12           --------->DOF5.7(1)   <---------KAN1  --------->YAB5 ------>At4g35610   <---------GATA12           ---------->DOF2--------->DOF5.7(1)   <---------YAB1 ----P <-----------HVH21                ------------------------>ANAC81   --------->ZAT14  <--------- ->MYB59  ----------->ARR10       <---------LBD16         --------->LBD16 <---------ZAT14------------   agcttcaaaagtcagatctttagattccaaatttgactcggaaaacaaaaaaagaaaacccagaaaaacgaatcactgatctgaatatgattcctttagc  4892000                                                                     --------->YAB1                                                                   --------->AHL25(2)                                                                   <---------AHL20(3)                                                                   <---------AHL12(2)                                                                  --------->YAB1                                                                  <---------ICU4                                                                 --------->ICU4                                                                --------->AHL25(2)                                                                <---------AHL12(3)                                                                <---------AHL12(2)                                                                <---------AHL25(2)                                                                <---------AHL20(3)                                                               <---------ICU4                                                               --------->YAB1                                                              <---------YAB1                                                              --------->ICU4                                                             --------->AHL25(2)                                                             <---------AHL20(3)                                                             <---------AHL12(2)                                                             <---------AHL25(2)                                                             --------->AHL20(3)                                                             <---------AHL12(3)                                                            <---------ICU4                                                            --------->YAB1                                                           <---------YAB1                                                           --------->ICU4                                                          --------->AHL25(2)                                                          <---------AHL20(3)                                                          <---------AHL12(2)                                                          <---------AHL25(2)                                                          --------->AHL20(3)                                                          <---------AHL12(3)                                                         <---------ICU4                                                         --------->YAB1                                                        <---------YAB1                                                        --------->ICU4                                                       --------->AHL25(2)                                                       <---------AHL20(3)                                                       <---------AHL12(2)                                                       <---------AHL25(2)                                                       --------->AHL20(3)                                                       <---------AHL12(3)                      <-----                                    --------->ANAC58  <---------ICU4 <---------ICU4           <------                             <----------DOF2          --------->YAB1<---------YAB1            -------                            --------->YAB5           <---------YAB1<---------AHL25(2)         <------                          <---------ARR14(2)         --------->ICU4--------->AHL20(3)         -------    >>>>>>>>>TBF1         --------->ARR14(2)        --------->AHL25(2)                        <------ ----->LBD16              <---------ARR11(3)        --------->AHL20(3)                        <------ -----ANAC46              --------->ARR11(3)       --------->YAB1<---------YAB1  ---------->DOF2 ----LBD16<------ZmHOX2a(1)<---------KAN1         <---------AHL20(2)--------->ICU4            ------- --->At4g35610            --------->GLK1(2)      --------->AHL20(2)<---------AHL12(3)      --------->ANAC55(2) ----At4g35610           <---------GLK1(2)    --------->AHL20(2)--------->AHL20(3)        <---------LBD16 -DOF2 <---------------------WRI1   --------->ANAC58<---------AHL20(3)        >>>>>>>>>TBF1<---------ANAC55(2) ----->AGL1    <<<<<<<<<<<<<<<<<LFY --------->ANAC46<---------AHL25(2)  --------->YAB1   --------->MYB52(1)   ggagaagaagaaggagagaacaatggagaatctttaacaaggaagagattatataataataataataataataataagaagaagaaagtacttacggatt  4892100                                            --------->AHL25(3)                                           --------->AHL12(2)                                           <---------AHL12(3)       ---------->DOF2                     <---------AHL12(2)    <---------TOE2(3)                      --------->AHL12(3)   --------->MYB52(1)                     --------->AHL12(2) ----KAN1--------->DOF5.7(1)             --------->AHL12(1)  <-------GAMYB ---GATA12                               <---------KAN1     <---------MYB46(3) --------->ARR11(2) -->GATA12                           <---------TOE2(3)      <---------DEAR3(2) --------->ARR14(2) ---ARR14(2)              ---------->DOF2<---------AHL12(1) <-----------RAV1(1)--------->GLK1(2) -->ARR14(2)              --------->DOF5.7(1)      <---------WOX13(2)          <---------ARR14(2) ---ARR11(2)    <----------ID1  --------->YAB5     --------->WOX13(2)          <---------ARR11(2)---- ---RVE1(2)   ------------------------>ANAC81<---------AHL20(2)   --------->ARR11(2)   ----------->HVH21 -->ARR11(2) ---------->DOF2--------->DOF5.7(1)  <---------AHL20(2)            <---------GATA12  <---   tggattaacgaaagagaaagaacaaaaaaaaagaagattaagaatatttattcaattgtggtctgttggaaactctctgcgaatcggaagtgaagcgtaa  4892200                 ----------->GT1          <---------GATA12          --------->GATA12                                                         <---------DOF5.7(1)      ------>ZmHOX2a(1)                                                --------->KAN1  <---------ARR14(2)                                                  <---------AHL20(2)   <---------ANAC58  --------->ARR14(2)                                               <------------------------ANAC81  --------->ARR11(2)                                            ------>ZmHOX2a(1) <----------DOF2  --  <---------ARR11(2)  <-----------GT1                       XXXXXXXXXXXXXXXXXXXXX>MIR4221<-----------GT1 ----->ICU4    ---------->DOF2                *TSS         <----------DOF2       <---------DOF5.7(1) ------YAB5  ----------->HVH21 <---------AtLEC2           <---------DOF5.7(1)<<<<<<<<<TBF1 <---------ANAC58   tgagtttcctcaggtctgaaagttaaactctttggatgtcgaattcaacttctctctctctctttcctctgttttattcttcttcttttttttacttggg  4892300                               --------->YAB1                               -------->HAHB4                               <---------ICU4                         ----------->GT1                     <---------AHL12(2)                     <---------WOX13(2)                     --------->WOX13(2)                    --------->AHL20(3)                    <---------AHL20(3)                    --------->AHL12(3)                    <---------AHL20(2)                    --------->AHL20(2)                                                             --                    <---------AHL12(3)                                                             --                    --------->AHL25(1)                                                             --                    <---------AHL25(3)                                                             <-                    --------->AHL25(2)                                                             <-                   --------->AHL12(3)                                                ----------------                   <---------AHL12(3)                                                <---------------                   --------->AHL20(2)                                <---------AHL25(3)            <-                   <---------AHL20(2)                               <---------ATHB51 <---------YAB1--                   --------->AHL25(1)                               <---------AHL25(1)             <-                   <---------AHL25(3)                               --------->AHL20(2)            ---                   --------->AHL25(2)                               --------->AHL25(2)            ---                   --------->AHL12(1)                   <-------TEIL--------->AHL25(1)            <--                   <---------AHL12(1)                 <---------SPL7(1)          --------->ARR11(3)--                   <---------AHL20(1)                <---------bZIP60(1)         <---------RVE1(2)---                   <---------AHL25(2)                --------->bZIP60(1)         <---------ARR11(3)<-                   --------->AHL25(3)                ================================================bZIP_DOF                  --------------->AGL15              <---------TGA1a<---------AHL25(2)            <--                  --------->AHL25(3)                 <---------bZIP60(2)         <---------GLK1(2)---                  ===================================================================================                  <---------------AGL15              <---------ANAC58<---------AHL12(1)      --------                 --------->WOX13(2)                  <---------ANAC58--------->AHL12(1)   ---------->DOF2                 <---------WOX13(2)                  --------->TGA1a--------->AHL25(3)    --------->DOF5.7(1)                 --------->AHL12(2)       =====================bZIP_DOF          --------->GATA12 ---             --------->TOE2(3)--------->ICU4        --------->RAP2.6(3)        ----------->ARR10  <--       --------->HSFB2a(2)    <---------ATHB51     <---------TGA2(2)<---------AHL12(1)<--------------       <---------HSFB2a(2)  --------->YAB1<----------DOF2 --------->LBD16  <---------At4g35610   ----    <----------DOF2<---------AHL25(1)    <---------DOF5.7(1)        --------->AHL12(1)--------->YAB1< -------->DOF2 --------->AHL20(2)<---------YAB5   ----------->HVH21 --------->AHL20(3)---------------   ttaaagcttttggaaacttaattaatttagtaataatggtttctctttctacatgacgtccgtagtccaaattattcagataagattttcataaaaggaa  4892400    <---------TOE2(3) ------->AHL20(3) ------->AHL20(1) ------->AHL20(2) --------AHL20(3) --------AHL20(1) ->AGL3 --AGL1 --------AHL25(3) ------->AHL25(2) --------AHL12(1) ------>AHL12(3) ------>AHL12(2)                                                          <---------AHL25(3) -------AHL12(3)                                                          <---------AHL20(2) ------->AHL12(1)                                                        --------->AHL25(1) ------>AHL25(1)                                                         --------->AHL20(2) --------AHL25(2)                                                        <---------AHL25(1) -------AHL12(1)                                                         --------->AHL25(3) ------>AHL12(1)                                                         <---------AHL20(2) ==MADS_MADS                                                             <---------AHL25(3) --->GT1    --------->AHL12(1)                                         --------->WOX13(2) ------>AHL25(3)                                                       --------->AHL12(2)           < -------AHL25(1)    <---------ARR11(3)                                 <---------AHL12(2)           < -AGL15     <---------AHL12(1)                                         <---------WOX13(2)       <---- ----->AHL25(3)   --------->ANAC58                                   <---------AHL20(2)   ----------- ---------AHL12(2)--------->ANAC58                                ----------->GT1         ----------- >AGL15 --------->AHL20(2)                                <---------ZAT6 <---------AHL20(3)     <----   atattttagattaaaaaatcaagaaattcaaaactgtttctagttttgttttgttttctagtgttttgaagttaattaaatgttctaaagtttcagtact  4892500                       <---------WRKY45                       <---------WRKY12          --------->AHL20(3)          <---------AHL20(3)          <---------AHL25(1)          <---------AHL20(2)        --------->AHL12(2)                                      --------->TGA2(2)                   -       --------->AHL12(2)               <---------ANAC58      --------->ANAC55(2)                   -      <---------AHL20(2)       ----------->GT1                --------->ANAC58                      - ---------ANAC58       <---------WRKY38(1)                    --------->ANAC58                      - ---------ANAC58      --------->WRKY18(1)<----------DOF2      --------->ANAC46                     <- ------DOF2          <-----------HVH21  <---------ANAC58     ------->TEIL                 --------->HSFB2a(2) ---->AtSPL8     ------>ZmHOX2a(1)<---------AHL20(2)     <---------------AtSPL3           <---------HSFB2a(2) ---->AtSPL3 <-----------GT1  ----------->GT1            --------------->AtSPL8 <----------DOF2    -- -----DAG2--------->AHL12(3)<------ZmHOX2a(1) ----------->GT1<-------TEIL--------->AHL25(3)    <-----   ttacttgtttatttttttcctctggtcaaaggatgttaaattgctttgtagtaaaactctatgtacgtcatagtttttatttctttgtttttctacaaat  4892600  --------->TGA2(2) <-----------TGA1 <-----------HVH21 -------->ANAC55(2) -------->ANAC58                                     --------->ICU4 -------->ANAC46        --------->ANAC55(2)          <---------YAB1        --------->DAG2 -------->ANAC58      <-----------GT1              <-----------GT1    <---------TOE2(3) ------TEIL         <----------DOF2                ------->TEIL       <---------TOE1(3)          ---- ----->TEIL<---------AHL12(2)  ---------->DOF2 ------->TEIL   --------->AHL12(2) <---------RVE1(2) ----------AtSPL3   <---------DAG2      <---------GLK1(1) <-----------GT1 ---------->DOF2        ----   gtacgtcaccaaaaaaaaacaactttacgttttaaaagatagatttctgtatgtaactattgacaatttttgaaggtaaagttgatttttgtgaagcaca  4892700  Previous    Next  AGI:  At1g14330.1    Description:  kelch repeat-containing F-box family protein. similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G02870.2); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G02870.1); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G02870.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48419.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose ox Range:  from: 4890113    to: 4892246    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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