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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                              <---------ZAT2
                                                                              ----------->RAV1(2)
                                                                              --------->At4g35610
                                                                          ------>NtERF2
                                                                          <-----------HVH21
                                                                          --------->LBD16
                                                                         --------->ANAC58
                                                                         --------->ANAC58
                                                                         --------->ANAC46
                                                                        <---------LBD16
                                                                    <----------DOF2
                                                                  <------ZmHOX2a(2)
                                                                 <---------ARR11(3)     <------ZmHOX2a(2)
                                                                 <---------AGP1        <---------ARR14(2)
               <---------bZIP60(2)                               --------->ARR11(3)    --------->ARR14(2)
      --------->At5g28300   ------>MYB46(1)                      --------->AGP1    --------->At4g35610
     ----------->GT1        ------>MYB83                        <---------CCA1(2)  <---------At4g35610
   <---------At4g35610     --------->MYB52(1)               --------->CCA1(2) --------->ZAT2
   --------->At4g35610 --------->REM1(1)                   --------->ARR11(3) <---------At4g35610
-------->GLK1(2)     ----------->RAV1(1)                   <---------ARR11(3)------>NtERF2
--ZmHOX2a(1) --------->ATHB12 <---------SPL7      --------->AtMYB61------>ZmHOX2a(2)  --------->At4g35610
---ANAC46   <---------YAB1--------->AtMYB61      <XXXXXXXXXXXXXXXXXXXXMIR776<-----------RAV1(2)
 
agaatcagcagtaacatgatggggcaacaccaacgtactgggtacttcagacaccaatacaagatttagatctttcccgccagctgagcagatcaactgt  4887800
                                                                                                 ---
                                                                                               -----
                                                                                           ---------
                                                                                           <--------
                                                                                           ---------
                                                                                           ---------
                                                                                           <--------
                                                                                          --------->KAN4(1)
                                                                                          <---------GLK1(1)
                                            --------->At4g35610          --------->ANAC46 <---------KAN4(1)
                 <-------TEIL               <---------At4g35610         <---------LBD16   --------->GLK1(1)
                --------->CCA1(2)          --------->ANAC58 <---------ZAT2   <---------GLK1(1)------
                --------->ARR14(1)         --------->ANAC58 <---------At4g35610          ---------->TaMYB80
                --------->GLK1(2)    <---------ANAC58       <---------ZAT14  --------->GLK1(1)------
             <---------TOE2(3)       <---------ANAC58       --------->ZAT2--------->LBD16<---------KAN4(2)
  --------->HSFB2a(2)         >>>>>>>>>>>>>>>>>LFY          --------->At4g35610         <---------GLK1(2)
  <---------HSFB2a(2)      --------->At4g35610              --------->ZAT14 --------->ARR14(2)------
----------->RAV1(2)        <---------At4g35610        ------->TEIL    <-----------GT1   --------->YAB1
 
ttcgcctggaaatattgagattcgattgtcaacttccattgtttgcaagcagacttgaatctgagcagagatttcaccggaactctctcaagaatatcct  4887900
       --------->ALFIN1
       <---------ANAC46
     <---------ANAC58
     <---------bZIP60(2)
     <---------ANAC58
     <---------ANAC46
     <---------TGA1a
     <---------O2
     --------->O2
    <------NtERF2
   <-----------HVH21
  --------->ALFIN1
------->GAMYB
===============MYC_MYB                                                        <---------GLK1(1)
------>MYB52(1)                                                               --------->CCA1(2)
->ZmHOX2a(1)                                                                  --------->ARR14(1)
>ARR11(3)                                                                    --------->ARR11(1)
-ARR11(3)                                                                    --------->ARR11(3)
>KAN4(2)                                                      <---------ANAC46--------->GLK1(1)
>ARR14(2)                                              <---------YAB1        <---------ARR14(2)
-ARR14(2)               --------->ATHB51      --------->ARR11(3)             <---------ARR11(3)
--->ANAC46              <---------ICU4        <---------ARR14(2)             --------->ARR14(2)
--->TOE2(3)  --------->ANAC58                 --------->ARR14(2)         ---------->DOF2
--->TOE1(3)  --------->ANAC58                <------ZmHOX2a(1)<---------WOX13(1)<---------YAB1
 
caacggtgtcgtggggaagcaattgcattatttctctgtctattgagaggattttgttctgagtgatggataacatgaaagatatgcttatttgtatcaa  4888000
                               ----------->GT1
                              ----------->GT1
                   <---------ANAC58
                   <---------ANAC58               --------->ARR14(2)
                   --------------->AGL15          <---------ARR14(2)        --------->ARR14(2)
       --------->YAB1       <------ZmHOX2a(1)     ------->TEIL          --------->ZAT6      <-------
      <---------ATHB12    ------------------------>ANAC81        <---------PCF2--------->TOE1(3)   -
 >>>>>>>>>>>>>>>>>LFY    <------ZmHOX2a(1)     ----------->GT1   --------->ZAT18   >>>>>>>>>MYB98  <
 
ttcaatccaatgttgattttttccttgaggaggaagataaaaaaaaaaaaacgtatatacaatcgatgggccctaaccctatccctaacaaatctcttta  4888100
                                                                                <------------CBF
                                                                              --------->AHL20(2)
                                                                          ------>ZmHOX2a(2)
                                                            ------>MYB46(1)  ----------->TBP
                                                       <---------WRKY18(1)----------------->AGL3
            --------->YAB1                            --------->WRKY12  <---------AGP1
     <---------ZAT18                                  --------->WRKY38(1)<------ZmHOX2a(2)
  ---------->DOF2                          --------->AGP1   ------>MYB83<---------ARR14(2)
---DOF2  <----------DOF2     ----------->GT1     <------------CBF       --------->ARR14(2)
-------->ANAC55(2)         <---------MYB52(1) <----------DOF2       <---------LBD16
---------ANAC55(2) ---------->DOF2       --------->LBD16 -------->ZAP1 <---------CCA1(2)       -----
 
atatgtaatgcgctttaatagttaaagcccattagttaaaaacccagagctatattgttgacctagcaaatttcggatctataaattgaagccattttct  4888200
                            <----------DOF2
                            <---------DAG2
                        ------>NtERF2
                        --------->LBD16
                       --------->DEAR3(1)
                       --------->RAP2.6(2)
                      --------->ATERF1(1)
                     <---------At4g35610
                     --------->At4g35610
                     --------->ZAT2                     --------->ANAC58
                     <---------ATERF1(1)                --------->ANAC46
                    --------->DEAR3(1)                  --------->ANAC58
                  --------->At4g35610          ---------->DOF2
        *TSS      <---------ZAT2            <------ZmHOX2a(1)                                    <--
  --------->ICU4  --------->ZAT2        <------ZmHOX2a(1)------>NtERF2                ==============
---->HSFB2a(2)    <---------At4g35610<------NtERF2    --------->CCA1(2)               ------>ZmHOX2a(2)
 
aggtcattagttttttcgtcgagcagccgcgctttttggccgaggaaggataaagagagacgccatgggaagaagtaagtttctctcgatctcttgtgac  4888300
         <---------GLK1(1)
         --------->GLK1(1)              <---------AHL20(2)                       --------->TOE1(2)
       <------ZmHOX2a(1)                --------->AHL20(2)                     --------->GLK1(2)
     >>>>>>>GRF7                       --------->AHL20(2)                      --------->ARR14(2)
  <-----------HVH21           ------>ZmHOX2a(1)   ------>MYB46(1)              <---------ARR14(2)
-------ZAT14              --------->ARR14(2)      ------>MYB83 <-----------RAV1(1)     --------->GLK1(2)
==============HOX2a_HOX2a <---------ARR14(2) <-----------GT1 <----------DOF2  <---------GLK1(2)<----
 
ttctctgtcaggatttctgtgttcttccgattcctccatggatttaattaaccaaatgttctctctttgttgcgattttgagattctgcgattcagtttt  4888400
                   <------MYB46(1)
                   <------MYB83
                   ----------->GT1
                  --------->MYB59                                --------->AHL20(2)
                  <---------TOE2(3)                        <------MYB46(1)
              <---------ICU4                               <------MYB83
              -------->HAHB4                              --------->MYB59
              --------->ATHB12                            <---------TOE2(3)    --------->ARR11(3)  <
             --------->ICU4                           --------->ATHB12       <---------YAB1        <
    <---------At4g35610                           --------->ATHB12           --------->ICU4       --
-------GT1   <---------ATHB12       <----------DOF2 <---------WOX13(1)     --------->YAB1         <-
 
tctattcatcggataaatgattaggtttatatagtttctctttagataccaattgattgattaggtttttatatactgtgatgattttgagctatatgag  4888500
                                                               <------ZmHOX2a(2)
                                                              --------->AGP1
                                                              --------->ARR11(3)
                                                         <-----------HVH21
                                                      <---------DOF5.7(2)
                                                      <---------At5g28300
           <---------GLK1(1)                         <-----------GT1    --------->ANAC58
      --------->ZAT2                              --------->ALFIN1      --------->ANAC58
      <---------ZAT2                             xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <-
      <---------At4g35610                 --------->TOE1(2)  --------->At4g35610                  <-
      --------->At4g35610               <---------ARR14(2)   <---------At4g35610         --------->ANAC58
------MYB46(1)                          --------->ARR14(2)<---------MYB52(1)   --------->ANAC58   <-
------MYB83--------->GLK1(1)    --------->ATHB12<---------ANAC46      <--------P         --------->ANAC58
------->MYB59        --------->GLK1(2) <------ZmHOX2a(1) <-----------TGA1      --------->ANAC58<----
--------AtMYB61    <---------KAN4(1)   ===============================HOX2a_HOX2a ---------->DOF2 <-
 
tttggtctgagctgaaatctgaataatctgaatattgatttaggacctgcgaggtgttaccgtcagatcaagggtaagccatacccaaagtctcgctact  4888600
                           ------>ZmHOX2a(2)
                           ============================HOX2a_HOX2a
                          <------ZmHOX2a(2)
            ===================HOX2a_HOX2a
            <------ZmHOX2a(2)
           <---------ARR14(2)
           --------->ARR14(2)
           <---------ARR11(3)
           --------->AGP1 =============================HOX2a_HOX2a
   <---------ANAC58       <---------GLK1(1)
   --------->ALFIN1      --------->ARR14(2)
   <---------ANAC58      <-----------ARR10
   <---------ANAC46      <---------ARR11(3)                                            <-----------HVH21
--------ANAC46           --------->ARR11(3)                                         <------MYB46(1)
--------bZIP60(2)        <---------ARR14(2)                                         <---------ANAC58
--------ANAC58          <------ZmHOX2a(1)       <------ZmHOX2a(1)<-----------GT1    <---------ANAC58
-------RAV1(1)       --------->YAB1  <------MYB83      <-------GAMYB                <------MYB83
--------ANAC58   ---------->DOF2     <------MYB46(1)  --------->ALFIN1           <---------MYB52(1)
 
gtcgtggtgtgccagatccaaaaatcaggatctacgatgttggtatgaagaggaagggtgttgatgagtttccattctgtgtccatttggtgtcatggga  4888700
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AGI:  At1g14320.1   
Description:  60S ribosomal protein L10 (RPL10A) / Wilm's tumor suppressor protein-related. Identical to 60S ribosomal protein L10-1 (RPL10A) [Arabidopsis Thaliana] (GB:Q93VT9); similar to 60S ribosomal protein L10 (RPL10B) [Arabidopsis thaliana] (TAIR:AT1G26910.1); similar to unknown [Populus trichocarpa] (GB:ABK92819.1); contains InterPro domain Ribosomal protein L10e; (InterPro:IPR001197); contains InterPro domain Ribosomal protein L10e/L16; (InterPro:IPR016180)
Range:  from: 4888209    to: 4889656    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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