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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                   ------->GAMYB
                                                                   ----------->RAV1(1)
                                                                  --------->ANAC58
         <---------ALFIN1                           --------->ARR11(3)
         <<<<<<<<<<<<<<<<<LFY                   <---------AHL20(2)--------->ANAC58
------HSFB2a(2)                                --------->AHL20(2) --------->MYB46(3)              --
----->HSFB2a(2)     <---------ALFIN1     --------->ZAT6<----------DOF2              --------->TOE2(3)
->ZmHOX2a(2)    <-----------HVH21 --------->MYB52(1)<---------ARR11(3)              <----------DOF2
-YAB1   --------->ANAC46    --------->YAB1   --------->YAB1 <---------LBD16--------->YAB1        <--
 
gagaagagaacaccacattggtcacactgtatgacaataactgatcactaataaatgtctttttcggcaacgacagaatgatatcaactttagttagcct  4760600
                                                                                            <<<<<<<<
                                                                                         -----------
                                       --------->ICU4                                  <---------At4g35610
                                       <---------YAB1--------->AHL20(2)         --------->DAG2
                   <----------DOF2    --------->TOE2(3)             --------->ANAC46   --------->At4g35610
------->YAB1--------->YAB1    ---------->DOF2<----------ID1       <-----------GT1  --------->ALFIN1
-------ATHB12   <-----------GT1    ----------->RAV1(1)   <---------YAB1        ---------->DOF2    --
 
atcatcaacgtccaaatataaacttttctaacatagagcaacattattaagacaaataatatgagtattaaactccataaactaaagtggtgctgtcaaa  4760700
                                             --------->YAB1
                                            <-------TEIL
                                        <---------YAB1
                                       --------->AHL20(2)
                                       --------->YAB1
                                       <---------AHL20(2)         <-----------GT1                 <-
                                     <---------YAB1          <---------RVE1(1)                    <-
                                   <---------AHL20(2)       <---------GLK1(2)                     --
<----------ID1                    <---------AHL20(2)        --------->ARR11(3)                 -----
----------->GT1                <---------AHL20(2)           <---------ARR11(3)<---------AHL20(2)  --
<WRKY18    ---------->DOF2     --------->AHL20(2)          <---------RVE1(1)  --------->AHL20(2)<---
>GT1   --------->TOE2(3)      <---------AHL20(2)  <---------ZAT6 <-----------GT1            --------
-------->DOF2   --------->ATHB12  --------->AHL20(2)  ---------->DOF2  <----------DOF2     <--------
 
aaaaagaaaaacttaaaagtgattagagttttatttatttattaatattcatagtgataaagagatttttatctctttcaatttatgaaatgttttcata  4760800
--------AHL20(2)                                      <---------AHL20(2)
--------AHL20(1)                                     --------->AHL20(2)
------->ARR11(3)          <---------AHL20(2)     <---------YAB1
---->YAB1                 --------->AHL20(2)   --------->AHL20(2)
------->AHL20(1)          <---------AHL20(1)   --------->YAB1
------AHL20(1)         <---------AHL20(2)  <---------AHL20(2)       <-----------GT1   --------->YAB1
->YAB1               <---------YAB1        --------->AHL20(2)  ----------------------->TaNAC69(2)
-YAB1            <---------ANAC46    --------->YAB1  <---------AHL20(2)     <---------ANAC46  ------
 
atattttgttgtcaaatatggagtattattttattttcaataacaaaaaattataaataaatgagtcgttttcacatttacgtctacaatcacaatgtat  4760900
                      <---------ANAC58
                      <---------ANAC58
              -------->HAHB4
              --------->YAB1
             <---------YAB1
           <--------ATHB1           <---------TOE2(3)
           <--------HAHB4          --------->YAB1
           <---------ICU4        <---------YAB1
           --------->YAB1       --------->TOE2(3)               <----------DOF2       --------->ARR14(2)
           --------->ATHB51    --------->YAB1             <---------DAG2              <---------ARR14(2)
          <---------ATHB12     <---------ICU4             <----------DOF2 <-----------RAV1(1)
          --------->ICU4       --------->ATHB12       <---------ZAT14     <---------ANAC58
          --------->AHL20(2)  --------->ICU4----------->GT1   ---------->ID1     ----------->RAV1(1)
          <---------ATHB51    <---------ATHB12        --------->ZAT14     <---------ANAC58
->TEIL  --------->YAB1<---------ANAC46 ---------->DOF2<---------ZAT18 <----------DOF2--------->GLK1(1)
 
gttatttagaacaataattatagtggcttaaaaatcattaatgaaagtagataatagtatactttttctttttctttgtgtggccaacatatccattttc  4761000
                                                                            ----------->GT1
                                                                            <----------ID1
                                                            <---------AHL20(2)
                           --------->ZAT6                   --------->AHL20(1)
                         <-----------GT1                    <---------AHL20(1)
              <---------ARR14(2)                           --------->AHL20(2)
              --------->ARR14(2)                           <---------AHL20(2)          ------->TEIL
             <---------CCA1(2)                         --------->AHL20(2)  ----------->GT1         <
             --------->GLK1(1)     --------->AtLEC2    <---------AHL20(2) --------->DAG2       <----
   ----------->TBP <---------CCA1(2)  *TSS <----------ID1  --------->YAB1---------->DOF2     <------
 
tagtctatatatacacatatccatctcttaactcttccatccaaaaaaaacaaaacaaaaaattatattcaagagaaaaaggaaaaaatgaatttcatct  4761100
                                                                                                 ---
                                                                                                ----
                                                                                             -------
                                                                                            ------>MYB83
                                                                                          --------->AtMYB61
                                                                                         --------->MYB46(3)
                                                                                      <---------MYB111(2)
                                                                                      <---------MYB111(1)
          <---------GLK1(2)                                                          --------->ZAT2<
      ---------->DOF2                                                                --------->At4g35610
   ----------->GT1                                --------->ANAC58                   <---------ZAT2-
   <---------ANAC55(2)                            --------->ANAC58                   <---------At4g35610
 <-----------RAV1(2)                              --------->ANAC46       --------->At4g35610------>MYB46(1)
<------ZmHOX2a(2)                 <------ZmHOX2a(1)            <---------ARR14(2)   --------->ANAC58
-----------HVH21              xxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ARR14(2)   --------->ANAC58
-------------AGL1          ----------->RAV1(1) xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -------->P <
---At4g35610              --------->ANAC46 --------->AtMYB61<---------TOE1(2)--------->REM1(1)------
 
ccgatcaggtaaagaaactctcaagctcaacaccagaggagccagaccacaacaagccagtcgaaggaaccgaaacagctacaagaccagctaccaacgc  4761200
                                                --------->ANAC58
                                                --------->ANAC58
                                             <---------At4g35610                                <---
                                             --------->ZAT2                              <---------ARR14(2)
                                             <---------ZAT2                              --------->ARR14(2)
                                          --------->LBD16                               <------NtERF2
                                         --------->RAP2.6(2)                            --------->ATERF1(1)
                                         --------->DEAR3(1)                            <---------ATERF1(1)
                                      --------->ANAC58                                --------->DEAR3(1)
                                      --------->ANAC46                               <---------LBD16
--->NtERF2<-------PIF5        <---------At4g35610                                    <------NtERF2
----->DEAR3(1)                --------->At4g35610  --------->MYB52(1)                --------->ATERF1(1)
-->DEAR3(1)                   <---------ZAT2 --------->At4g35610                   <---------DEAR3(1)
---------ZAT2           <---------At4g35610<---------ALFIN1                    --------->DAG2   ----
-------->ZAT2   <---------TOE2(3)--------->At4g35610                          ---------->DOF2   <---
---------At4g35610  <---------REM1(1) --------->ANAC58                     ----------->GT1------>NtERF2
->GAMYB   ------->PIF5  --------->At4g35610<------NtERF2              <---------REM1(2)--------->LBD16
 
cgagctcatggcaagtgccaaggttgtagctgaagctgctcaagccgcagctcgtaacgaatcagacaaactcgacaagggtaaagtcgccggagcctct  4761300
              ------>NtERF2
             --------->DEAR3(1)
            --------->ATERF1(1)
           --------->At4g35610
    --------->TOE2(3)
  <---------ARR11(3)
  --------->ARR11(3)
 <---------CCA1(2)          <--------P
 --------->GLK1(1)         --------->At5g28300
 <---------GLK1(1)      <---------------------WRI1                               --------->ARR11(3)
------ZAT2--------->ANAC46----------->GT1                         <---------REM1(2)     --------->MYB46(3)
----->At4g35610  ------>NtERF2                        <-----------HVH21          <---------ARR11(3)
------At4g35610  --------->LBD16        ---------->DOF2 --------------->AtSPL3   <-----------ARR10
 
gctgatatcttagacgctgccgagaaatacggtaagttcgatgaaaagagtagcactggtcagtacctcgacaaggctgagaagtatctcaacgactacg  4761400
                                                                                  ---------->DOF2
                                                                            <------NtERF2
                                                                            <---------At4g35610
                                                                            --------->At4g35610
                                                                           ------>NtERF2
                                                                           <---------ATERF1(1)
                                                                           <---------ERF1
                                                                           <---------MYB46(3)
                                                                          <---------ATERF1(2)
                                                                          --------->ATERF1(2)
                                                                         --------->ATERF1(1)
                                                                         <------NtERF2
                                                                         --------->RAP2.3(1)
                                                                        <---------RAP2.3(1)
                                                                        <---------ORA47(2)
                                                                        <---------DEAR4(2)
                                                                        ------>NtERF2
                                                                        <---------ATERF1(1)
                                                                        --------->LBD16
                                           <-----------RAV1(2)         <---------RAP2.6(2)
                 <---------ANAC58     <---------TGA1a                  <---------RAP2.3(3)
                <---------ZAT2        --------->TGA1a                  <---------RAP2.3(2)
                --------->ABI4(2)     ====================MYC_MYB      --------->ATERF1(2)
               --------->ALFIN1     ------>NtERF2                      <---------DEAR3(1)
         <---------ALFIN1          --------->DEAR3(1)                  --------->DEAR3(1)
        <---------ZAT14       ------>ZmHOX2a(1)                        <---------ATERF1(2)
        --------->ZAT14      <---------ALFIN1             --------->ANAC58<---------DEAR3(1)
      --------->ANAC46     ------>ZmHOX2a(1)   <----------CDC5  ----------->RAV1(2)
      --------->ANAC58  --------->PCF5--------->O2     <------NtERF2  <---------LBD16
      --------->ANAC58<---------MYB46(3) <-----------HVH21--------->ANAC58<---------ANAC46
    --------->ZAT6<---------AtMYB61----------->HVH21   <---------ZAT2--------->ZAT2
    <---------ALFIN1 <---------AtMYB61<---------O2    --------->ANAC58--------->DEAR3(2)           <
<-----------HVH21<---------ANAC58------>ZmHOX2a(1)    --------->ANAC58--------->ATERF1(1)       ----
 
agtcgtcacactccaccggtgctggtggtcctcctcctccgacgagtcaggctgagccagcaagtcagcctgagccggcggctaagaaagacgatgaaga  4761500
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AGI:  At1g13930.1   
Description:  similar to nodulin-related [Arabidopsis thaliana] (TAIR:AT2G03440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63832.1)
Range:  from: 4761039    to: 4761722    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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