Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <-----------TGA1                                                                            <-----------HVH21                                                                           --------->ANAC58                                                                           --------->ANAC55(2)                                                                           --------->ANAC55(1)                                                                           <---------O2                                                                           ======================bZIP_DOF                                                                           --------->O2                                                                           --------->TGA1a                                                                           --------->TGA2(1)                                                                           --------->bZIP60(2)                                                                           <---------TGA1a                                                     <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   ----------->RAV1(1)     ======================bZIP_DOF                                                  --------->ANAC46         --------->ANAC58                                                  --------->REM1(1)        <---------ANAC55(2)                                                --------->HSFB2a(2)        <---------bZIP60(1)                                                <---------HSFB2a(2)        --------->ANAC46                                                <-----------GT1            --------->bZIP60(1)         <---------ZAT18                   <----------DOF2                <-----------STF1       --------->At4g35610                 ==========================================bZIP_DOF     <-----------RAV1(2)           --------->At4g35610                   <-----------GT1    --------->At4g35610        xxxxxxxxxxxxxxxx>smallRNA(i)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------ZAT2       <----------DOF2 --------->HSFC1(2)  --------->ARR14(2)           ---------->DOF2    --------->ZAT2     ------>ZmHOX2a(1) <---------HSFC1(2)  <---------ARR14(2)       ---------->DOF2   aaaaacagcaggggactctgtcttcctctttcgcattagccgaagcttttctacaacacaacaaatccttgtaaatcacgtcacaaaacaaagaaagttg  4621200                                                                            --------->MYB52(1)                                                                           --------->CCA1(2)                                                                          --------->ARR11(3)       --                                          ------>NtERF2                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                         --------->ANAC46     --------->MYB52(1)               <-----                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <------------MYB.PH3(1)        ======                  --------->YAB1        <---------LBD16       <-----------GT1    <--------P    ======   aaattttgcataattttaagtcataacataccctgagtgtttcccgcctcgtttaatgacatagtaacggtttgaagataagggttgatcaagaacagga  4621300                    --------->ANAC46           <---------ARR14(2)           --------->ARR14(2)           --------->ARR11(3)                             xxxxxxxxxxxxxxxx>smallRNA(i)           --------->GLK1(2)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <-           <---------AGP1                                <-------TEIL                              --           <---------ARR11(3)                           --------->CCA1(2)                       <----          <------ZmHOX2a(1)                            --------->ARR14(2)  <---------ANAC46 <--------    <----------ID1  --------->ANAC55(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->ANAC58 ------->YAB1------>ZmHOX2a(2)               <---------RAP2.6(2)   <-------TEIL         --------->ANAC58 -ZmHOX2a(1)<------ZmHOX2a(2)               <---------LBD16   --------->YAB1     ---------->DOF2<---- ===================HOX2a_HOX2a     <---------TOE2(3)  <---------ARR14(2)  <-----------RAV1(1)  <---- ==================HOX2a_HOX2a ----------->GT1   <----------DOF2 <---------GLK1(2) --------->DAG2 ---   atgaaaacgacaggatctatataagtaatcgtctggttaagaaatatgcggctttcagatacaatcaggttcgcgttctgtgggaaaggtaagcctttga  4621400                                                                                               ------                     --------->ANAC58                                                         <------ZmHOX2a(2)                     --------->ANAC58                                                        <-------                 ------>ZmHOX2a(2)                                                      <xxxxxxxxxxxx                --------->ARR14(1)                                                     --------->At4g35610                <------ZmHOX2a(2)                                   <------NtERF2      <xxxxxxxxxxxxx                --------->CCA1(2)                                  --------->LBD16     <---------At4g35610        <--------P   --------->ANAC46                            <---------LBD16   --------->LBD16    <---------LBD16--------->LBD16                             --------->ANAC46    ------>NtERF2 --------ZAT14 <---------ARR11(3)                              --------->ANAC58    --------->ANAC46 ------->ZAT14 --------->ARR14(2)                              --------->ANAC58   <---------LBD16 -----ANAC58   --------->ARR11(3)                             --------->ZAT18     <---------ETT(1) --DOF2<---------MYB52(1)XXXXXXXXXXXXXXXXXXXX>MIR169G* --------->YAB1            <---------LBD16 -----ANAC46   --------->AGP1                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   <---------GLK1(1) -----ANAC58 ----------->ARR10        <---------WRKY18(1)     --------->SPL7     --------->RAP2.6(3) ------>ALFIN1 <---------ARR14(2)    --------->WRKY38(1) <---------YAB1       <----------DOF2--------   gtgtagcccggtagcaagatccgaagcaacaagttggccttgactcttcatcttgaattataagtacgccggagtttggactttccggcaactccgatct  4621500                        ----------->GT1                   <---------CCA1(1)                        --------->ANAC58                  <---------RVE1(1)                        --------->bZIP60(2)              --------->ARR11(3)                   --------->ANAC46                      <---------ARR11(3)                   --------->ANAC58                      <---------ARR14(2)                   --------->ANAC58               --------->LBD16               --------->MYB46(3)                ------->GAMYB  <----------DOF2  ------->GAMYB                 --------->TOE1(2) >ZmHOX2a(2)   <---------MYB52(2)                --------->TOE2(2)                               <--- --ARR14(2) <----------ID1                      --------->DEAR3(2)             <-------TEIL   <------ xxxxxxxxxxxsmallRNA(fl3)                       <---------LBD16              *TSS            <------- xxxxxxxxxxsmallRNA(fl3)--------->ANAC58----------->GT1----------->ARR10   <---------YAB1   --------- ->ARR14(2) <---------ETT(1)    <-------TEIL  <-----------GT1      <---------MYB46(3)      <---------YAB1   gtttctttggtattccgacaaacgcctcgtaacatacatttttggttataaccggcgaagatatttcagtggtttttgtgattcatatgagttctgattg  4621600                                                                                 <----------DOF2                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                           <---------ANAC58                                                                      ------>ZmHOX2a(2)                                                                     <------ZmHOX2a(2)                                                                    --------->AGP1    --------->ANAC46                                                                    <---------AGP1   <---------LBD16                                                                    <---------ARR11(3)<---------ANAC55(2)     <---------AHL20(2)                                             --------->ARR14(2)--------->ANAC55(2)   <-----------TBP                                                  <---------ARR14(2)--------->ANAC58 ------ANAC46                                                       --------->ARR14(3)<---------HSFB2a(2) ---WOX13(1)                ------------>CBF                        <---------ARR14(3)--------->ANAC58 -----CBF             --------->YAB1                       <----------DOF2 <---------ANAC58   <------ >ATHB12              <------ZmHOX2a(1)            ---------->DOF2  --------->ARR11(3)--------->HSFB2a(2)   ggtctatatatatgtagactactaggataagacaatttgtaacccaaaaaaaaaaaagagacttttctaagatcttgacttggcttttacggaagtcttt  4621700                                                           --------->TCP16(1)        --------->ANAC46                                                           <---------PCF2     --------->ANAC58                                                    <---------AHL20(2)        --------->ANAC58                   --------->ANAC46          --------->ANAC58             --------->ANAC58                  ------->TEIL               --------->ANAC58             --------->ANAC58                 <-----------GT1            --------->WOX13(1)       --------->AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-----------HVH21 --------->PCF5--------->DAG2 ----DOF2     --------------->AtSPL8 --------->GLK1(2)  --------->ALFIN1---------->DOF2   ttgttatggcagtttctatgtacctcacattgttttgaaattctgtcactcaatttaagtggtccctagaattaaaaagcaagttatcagcaattgattc  4621800                                    <-----------HVH21                                    <-----------TGA1                                   --------->ANAC46                                   --------->ANAC58                                   --------->ANAC58                                ------>ZmHOX2a(2)                                   --------->bZIP60(2)                            <------ZmHOX2a(2)                                  --------->SPL7                                 <---------AGP1                                  <-----------STF1                               <-----------ARR10                           <---------ANAC58                                      --------->AGP1                        --------->WRKY12                   --------->AHL20(2)    --------->ARR11(3)                        --------->WRKY38(1)      <------NtERF2                   <---------ARR11(3)                        --------->WRKY45 <-----------RAV1(2)<---------AHL20(2)   --------->ARR14(2)                       --------->DOF5.7(2)      <---------MYB46(3)               <---------ARR14(2)                     <---------ANAC46  <-----------HVH21   <---------AHL20(2)   <---------CCA1(2)                <---------ICU4 <---------ANAC58--------->ALFIN1          <---------------AtSPL3               --------->ICU4  <---------ANAC58<---------DEAR3(1)        <---------------AtSPL8          ----------->GT1  <---------ANAC58  --------->ALFIN1        <----------DOF2 <---------ARR11(3) <---------TOE2(3)--------->TGA2(2)  --------->YAB1 <-----------RAV1(1)         <-   caagttattaagaagtaatacttacgttgacttgcctacgtcatcaggggtggctctataattttatgggcctttgttgtacagatcttaacaatgggcc  4621900                                                          <------MYB46(1)                                                         --------->MYB111(1)                                                         <---------MYB46(3)                                                       <-------GAMYB                                                      --------->MYB55(2)                                                      --------->MYB52(2)                                                      <---------MYB46(3)                           <-------TEIL               --------->MYB111(2)                       <---------------AtSPL3         --------->MYB46(2)                        -----              --------->ANAC46                      <---------MYB52(1)                         <-----              --------->ANAC58                --------->At4g35610                  <----------DOF2---       --------->GLK1(2)   ------->TEIL     --------->YAB1<------MYB83    <----------DOF2    <------- ---------DOF2--------->ANAC58      --------->TOE2(3) --------->MYB111(1) <---------DAG2    ---------   tctttagaaattctaaacgctatgttatgtacgtatagcctaaaaatcagaagcgttagttggtgctggactagggctttttcttctttgtttcattatc  4622000  <---------ALFIN1                                      <-----------ARR10 ---->YAB1                                              --------->ARR11(3) ----YAB1                     ------->TEIL        ----------->GT1 ------>At4g35610         ------->TEIL         <---------AHL20(2) --ICU4                <---------YAB1         --------->AHL20(2)   ---------->DOF2               ---- >ICU4           --------->AHL20(2) <---------At4g35610 <---------ARR11(3)                      -----   atctccaccttcaaacaaaaaaaatatgaatgcatttgggctcacatattaaatgtaaaatctcacctataaagcccagtctagatagttttcttacacc  4622100  Previous    Next  AGI:  At1g13470.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G13520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42040.1); contains InterPro domain Protein of unknown function DUF1262 (InterPro:IPR010683) Range:  from: 4620225    to: 4621577    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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