Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------ZAT18                                            --------->LBD16    --------->ZAT14            <---------DAG2        --------->GLK1(2)    <---------ZAT14    <------ZmHOX2a(2)            <---------GLK1(1) -------->ZAT6     <------ZmHOX2a(2)             --------->ANAC58   ----------->GT1 --------YAB1    --------->GLK1(1)               --------->ANAC46  --------->ARR11(3)             --- ---------GT1  <------NtERF2   <----------DOF2   --------->ANAC58  <---------ARR11(3)           <----   tatcagtacacatagtcggagatcgatcaaaccctttttctctcatcttagacgaaatctgttcccagagatgtttattagatttggatgtattgaataa  4614800                            --------->TOE1(2)                     --------->ATHB12             --------->ANAC58                                              <----------DOF2             --------->ANAC58                                          ---------->ID1          <-----             --------->ANAC46--------->CCA1(2)     --------->O2       <---------ANAC58        <------ ------>MYB46(1)    --------->ICU4    <---------ANAC58                <---------ANAC58   ============ ------>MYB83--------->ANAC55(2)      <---------ANAC46             <----------DOF2       ------>ZmHOX2a(2) ------>MYB46(3)    <---------YAB1    <---------ANAC58         <---------CCA1(2)       <---------ARR11(3) -------GT1 <---------LBD16<---------At4g35610------->TEIL <---------MYB52(1)          --------->ARR11(3)   accatccatacctctacggaacatgattaagctacgagtttcgtcttgaacccatgtctccgctcgtttctttggtgctttaacttcgtgatcttctcca  4614900                                                                                                  <--                                                                                                  <--                                                                                   --------->ARR14(2)                          <---------RAP2.6(2)                         <---------MYB46(3)        <----                     <---------MYB46(3)                              <---------ANAC46         <------               <---------ARR14(2)                                    --------->ALFIN1         -------               --------->ARR14(2)                                    <---------AtMYB61     <---------GLK1(2)               --------->GLK1(2)                                   <---------MYB46(3)------>ZmHOX2a(2)        --------->LBD16 <-----------RAV1(1)     <---------YAB1    <---------AtMYB61<---------ARR11(3)        <---------HSFB2a(2)                     --------->ICU4    <---------DEAR3(1)<------ZmHOX2a(2)        --------->HSFB2a(2)                <---------At4g35610 <-----------RAV1(1) <---------ARR14(2) <----------DOF2  <-----------RAV1(1)<------MYB83--------->ATHB12 --------->ALFIN1 --------->ARR11(3) ----ALFIN1   <---------GLK1(2)      <------MYB46(1)      <---------MYB46(3)       <---------AGP1 <-- ---ZAT14  <------ZmHOX2a(1)        <---------AtMYB61    <---------YAB1            --------->AGP1<--- =================HOX2a_HOX2a<---------ANAC46--------->ICU4    <---------AtMYB61  <---------CCA1(2)   ctgctttctccgaggagaatctgttgttgtggctgagattggtggagatgatgattgtggtgattgtggtggtggtgagattgtagatctactgattcgt  4615000                                           <---------MYB46(3)                                          <---------AtMYB61                                       <-----------RAV1(1)                                       <---------AtMYB61                                      <---------ANAC58                                  <---------ANAC58                                  <---------ANAC58                                 <-----------RAV1(1)       <---------------AtSPL8    <---------AtMYB61      <---------ANAC46         --------->ALFIN1                        <---------HSFB2a(2)    <---------MYB46(3)       <---------ANAC58                  ------>ZmHOX2a(2)   <---------ZAT6            <---------ANAC58--------->ALFIN1  ============================HOX2a_HOX2a ----MYB83                   <---------ANAC46<---------ANAC46<---------ARR11(3) ----MYB46(1)                <---------ANAC55(2)  <------ZmHOX2a(1)<----------DOF2 -----MYB52(1)        --------->YAB1  <---------ANAC58       --------->ARR11(3) ---MYB46(3)         <---------YAB1  <---------At4g35610   <---------YAB1               ----------->ARR10 -->ATHB12 <-------TEIL <---------CCA1(2) --------->ALFIN1 --------->ICU4  <---------GLK1(1) -------MYB46(3)   --------->YAB1--------->ALFIN1 ====================HOX2a_HOX2a   <------ZmHOX2a(1) ------AtMYB61    <------ZmHOX2a(2) --------->ALFIN1    <---------YAB1 --------->HSFB2a(2)      -----   tggtagtggtgagtacatcgatcatcatatcgcgtgtggtgctggtggtggaggaattgtgatgatcgtctttgtagaaatcagtaggacgagatttgtc  4615100                                                                       --------->ANAC58                                                               ----------->RAV1(1)                                                              <---------WRKY12                                                           --------->DEAR3(1)                                  --------->CCA1(2)        --------->DREB2C(2)                                 --------->ARR14(2)     <---------ALFIN1                                 <---------ARR14(2)     --------->DEAR3(1)                      --------->LBD16                   --------->AtMYB61                      ----------->HVH21                <---------MYB55(2)      <---------ICU4 --------->LBD16                   --------->MYB46(3)                          --     ------->TEIL   <---------LBD16 <---------TOE1(1)--------->ANAC46---------->DOF2              <--     <---------YAB1 <---------HSFB2a(2)      <----------DOF2<-----------HVH21                   ----- ---->ETT(1)        --------->HSFB2a(2)      --------------------->WRI1--------->ANAC58  ----------->GT1   ggaaatgaacattgctgtgtttcccggacagaatggatacgatgttcctttgttcccaccaccgtcaacacaaaagccccctcagaacaaaatgaaaaaa  4615200                 <------MYB46(1)                                <-----------GT1                 <------MYB83                             --------->YAB1              <---------MYB52(1)                          <------ZmHOX2a(1)             --------->AHL20(2)     <-----------GT1      <---------CCA1(2)             <---------TOE2(3) <---------TOE2(3)  *TSS  <----------DOF2<-----------GT1       <------MYB83----------->GT1<---------AHL20(2) --------->GT1<<<<<<<<<MYB98 --------->TOE2(3)          <---------TOE1(3)---------->DOF2<---------AHL20(2) -------TOE2(3) --------->MYB59           --------->CCA1(2)  <---------ICU4      ----------->GT1 ----->DOF2 <---------TOE2(3)--------->YAB1  <------MYB46(1)<---------YAB1<---------TOE1(3)<---------   aaggttttaactttaagttaggttttctctatcttagtctagagatttggttttggataaggataattacaaatttaaagttttggttatataaattggt  4615300                                                            <---------YAB1                                              <-----------ARR10    ------->TEIL                                              --------->ICU4--------->ICU4                                            <---------------AGL15  --------->ARR11(3)                                            --------------->AGL15 <---------CCA1(2)                                     <---------MYB52(1) ------->MYC3                               -- ---CBF <-----------GT1        --------->WOX13(1)       <-------MYC3                               <-   ttgaatgtttttgccatataaactttgtaatgtcaatctgttattgcaaatattagcatgtgatgtttgtatcttgatgcatcaaacttcatcaccttgg  4615400                                                      <-------TEIL                                                     --------->CCA1(2)                                                     --------->ARR14(1)                                                    <---------GLK1(2)                                                    --------->ARR14(2)                      <---------ANAC46              <---------ARR14(2)                --------->ARR11(3)              ---------->DOF2               --------->REM1(1)           <-------TEIL             ----------->GT1 ------->At4g35610    <---------ANAC58  ------>MYB46(1)     ----------->GT1     --------->CCA1(2) --------At4g35610    <---------ANAC58  ------>MYB83--------->ARR11(1)     ---------->DOF2     <-----   catctgatatataacttacatcttgtgtgcatccataagaccaaatgcatcaaagattcgaagggagaaaatgtcaaaaaagaaatgagacactcttctt  4615500                                                                                      <------------MYB.PH3(1)                                                         --------->ATHB12           <-----------GT1                                   <---------TOE2(3)  ---------->DOF2      ------>MYB83                                   <---------YAB1   --------->ANAC46       ------>MYB46(1)                       ---------->DOF2              --------->ANAC58     --------->AtMYB61  ---------                    --------->TOE1(3)               --------->ANAC58     <---------MYB59    <-------- -----DOF2          --------->TOE2(3)           --------->ANAC46 ----------->GT1    --------->MYB52(1)   tggaacaaaacaataactaaaaccataaaccgaaattaagtttgtattaaacacaagaaagattgaaccgaaaaaccaaaccaatataaccgattttatt  4615600                                                 <---------LBD16                                               --------->GLK1(2)                                               --------->ARR11(3)                                               <---------ARR14(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                               --------                               <---------At5g28300                                  ----------->GT1                           <---------ZAT6  --------->AHL20(2)                    <---------At4g35610                      --------->YAB1       --------->YAB1                        --------->At4g35610                 <---------ANAC58       --------->WOX13(1)                       <---------ZAT2      --------->YAB1 <---------YAB1   <------NtERF2                              --------->ZAT2 <-------TEIL    <---------ANAC46   <---------DEAR3(1)                      --------->bZIP60(1)    <- >AHL20(2)       <---------ANAC58   <---------ETT(2)                        <---------bZIP60(1)   --- -AHL20(2)       ----------->GT1   --------->RAP2.6(3)                   --------->ALFIN1 --------->GLK1(2)   acatacattcaaaactatgtcgtataatagtgttacggtcggcaattaaaatctggaattttaaaacattttgaagtgttgtcagcttgaaaattctgta  4615700  Previous    Next  AGI:  At1g13450.1    Description:  DNA binding protein GT-1. similar to DNA-binding protein GT-1-related [Arabidopsis thaliana] (TAIR:AT3G25990.1); similar to DNA binding protein GT-1 [Brassica rapa] (GB:ABV89646.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005) Range:  from: 4612728    to: 4615202    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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