Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ARR14(2)                                                               --------->GLK1(1)                                                           ----------->GT1                                                    --------->ICU4                                                    <---------YAB1                                                  <--------HAHB4--------->ARR14(2)                                                  --------->YAB1--------->GLK1(2)                                                 <---------AHL20(2)                                                 <---------YAB1<---------GLK1(1)                                               <---------------AGL15                                              <-----------------AGL3                          <---------ALFIN1    =======================================================                       <-----------GT1        ----------------->AGL3      --------->At4g35610   <----------DOF2  <---------WOX13(1)      --------->GLK1(2)  <---------HSFB2a(1)      <---------YAB1 -->YAB1  <-----------GT1--------->MYB46(3)<---------GLK1(2)<------ZmHOX2a(1)         <-----------GT1   agcttctttattttacaacttaattgaaccacactagagaggccagaatctataattagtgaggaaaatccgactaagctaaaccatattacaattccaa  4219700                                      --------->YAB1                                     --------->ICU4               --------->TOE2(3)     <---------ATHB51            <---------ICU4         <---------------AGL15  <---------MYB52(1)            <---------GLK1(2)   --------->AtLEC2      <---------At5g28300       >>>>>>>>>>GT-3b         --------->YAB1       <---------ANAC58       <-----------GT1         ----------->GT1        -       ------>ZmHOX2a(1)      <---------ANAC58    --------->ARR14(2)       ---------->DOF2    -------      --------->TOE2(3)      <---------ICU4    <---------TOE2(3)       ---------->DOF2      --------- ==================================================MADS_MADS       ---------->DOF2   <-------TEIL<---   aatgctatccttcataatctcaatctcttaatccttgcaattataagttatggattcaccgttcttgagaaaagaaagaaagaaaaatacatggaaaaga  4219800                                  <----------DOF2                                 <---------ANAC58    --------->ATHB12                                 <---------ANAC58  <---------WOX13(1)                            ----------->RAV1(2)  --------->ATHB12                            --------->At4g35610 <---------YAB1 <---------HSFB2a(2)  <---------ANAC58          --------->ZAT2    --------->ANAC55(2)  <---------ANAC58          <---------ZAT2    <---------ANAC55(2)                --------->AHL20(2) ------>TEIL                <---------At4g35610 --------->ICU4 --------->HSFB2a(2)                <-- -->ICU4           <---------HSFB2a(2)      --------->YAB1     --------------->AtSPL8             --- ->DOF2      --------------->AtSPL8        <---------ATHB12    <---------------AtSPL8  <-----------GT1 ------REM1(1)     --------->HSFB2a(2)   --------->WOX13(1)   <---------ANAC46   <---------AHL20(2)   tgaagcttgtttttcttcgtactagaaaacagctggcttttctcaatcacatgattgaatggtttctggtaccatttttgtttttaatttttcatttttg  4219900                                                                           --------->ZAT18                                              --------->ANAC58             <---------ZAT18                                              --------->ANAC58          <---------ANAC58                                              --------->ANAC46          --------->TGA1a                                          <-----------GT1               <---------ANAC58       <-----------GT1                  --------->AHL20(2)       --------->ANAC58   ------>ZmHOX2a(1)                <---------AHL20(2)           --------->ANAC58                   -  --------->TOE1(3)                 --------->AHL20(1)           --------->ANAC46                   <  --------->TOE2(3)                 --------->AHL20(2)           --------->ANAC55(1)               -- -------GLK1(1)                    --------->AHL20(2)     <---------ICU4<---------TGA1a      <------- ------>GLK1(1)              <---------MYB59--------->ANAC46    <---------LBD16             ---------   atttccttaaaactatacaataagacaatgacctaaaaaaaattatacacgactcaacaaaaattacacggctctcgtgcccaaacccaaactgtttact  4220000                                                                                            ---------                                                                                           <---------HSFB2a(2)                                                                                           --------->HSFB2a(2)                                                                                   <---------ANAC58                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   <---------ANAC58                                                                                  <-------TEIL                                                                                  --------->SPL7  ---  <------------CBF                                                            <---------------AtSPL3 -------->AHL20(2)                                                            <---------------AtSPL8 ---------AHL20(2)             <---------ANAC58    --------->YAB1          <---------ARR14(2)     <-- ------->AHL20(2)              <---------ANAC46 --------->YAB1          <---------ANAC46  <---------LBD16 ----GT1                       <---------ANAC58<-------TEIL           --------->LBD16    <---------LBD16 >ZAT14                 ------------>CBF--------->YAB1              --------->DEAR3(2)------->TEIL*TSS   atttaattgggctaaatctatagaggcccaatggcttataaatcatagattcataatactgaaatattaaaccggcgtaaatggtacgtacttcgggaaa  4220100                                              <---------ANAC58                                          <---------ANAC58                                 --------->At4g35610                                            <----                                 <---------ZAT2                                                ------                                 --------->ZAT2                                         --------->At4g35610                   --------->ARR14(2)     <---------ANAC58                       --------->ARR14(2)                   <---------ARR14(2)     --------->TGA1a                        <---------ARR14(2)   <---------ARR14(2)      <---------LBD16<---------TGA1a                        --------->GLK1(2)   --------->ARR14(2)     ------->TEIL    ==================================bZIP_DOF    <---------At4g35610 >LBD16        <---------LBD16<---------MYB52(1)                             --------->YAB1  -------- ------>MYB52(1) --------->LBD16 <---------At4g35610                        <------ZmHOX2a(2)<------- ---------GT1<-----------GT1 --------->LBD16  <---------ANAC58   <----------DOF2<---------GLK1(2) <<<   taacgaattcgattttaaccggaaactgaaccggaagctgagtctcgtgcctgccttctctaggcttctttgtttccgatcagaatctcgagctcaactg  4220200           --------->MYB46(3)         ------>NtERF2         --------->ORA47(1)         <---------ATERF1(1)       --------->DEAR3(2)     --------->MYB52(1) -------HVH21                                            --------->ATHB12 ->GAMYB--------->DEAR3(1)      <----------DOF2          --------->ATHB51                       ----- ->At4g35610                ------>ZmHOX2a(1)           --------->ICU4                    --------->ANAC58 --At4g35610--------->ZAT6 <---------MYB59              <---------YAB1                    --------->ANAC46 <<<<<<WRKY18          --------->WRKY12       ------>ZmHOX2a(1)   <------ZmHOX2a(1)       --------->ANAC58   tcaaaactagccgaccactaagtcgttgtcctaactttctctctgttcctcatcgaacattattgggaggagagagagagagagagaagaccaagaaaca  4220300           --------->LBD16           <---------LBD16          <---------TOE2(1)          <---------TOE1(1)         ------>ZmHOX2a(2)         ===================================HOX2a_HOX2a        =============HOX2a_HOX2a                              <---------ANAC58        ====================================HOX2a_HOX2a       <---------ANAC46        --------->CCA1(2)                         <---------ARR14(2)        <------ZmHOX2a(2)                         --------->ARR14(2)       --------->ARR14(2)                         <---------ARR11(3)       --------->AGP1         ---------->DOF2   <---------ARR11(3)       <---------ARR14(2)   --------------->AGL15 --------->ARR11(3)     ----------->ARR10     ----------------->AGL2<---------GLK1(1)  ==============HOX2a_HOX2a----------------->AGL1--------->GLK1(1)                                  -  =============HOX2a_HOX2a ----------------->AGL3--------->RVE1(1)         <<<<<<<<<TBF1           <-  <------ZmHOX2a(1)   --------->ETT(1)          --------->ARR11(3) <-----------GT1            ------- ---->MYB52(1)<------ZmHOX2a(1)      <------ZmHOX2a(1)        <---------ANAC58   ------>ZmHOX2a(1) <-   acgaggatagatccgaggaaattgtcggaaccaaaaggaggaagatgggagatatctggacatggcttatttccttcttcttcctcatcgctcttgtcgg  4220400            <---------At4g35610            --------->At4g35610                                                                  <---            --------->ZAT2                                                                       ----        <-----------HVH21                                 <----------DOF2                    --------       --------->WOX13(1)                     ---------->DOF2     --------->YAB1             <-------GAMYB -------->YAB1 <-------TEIL      <------ZmHOX2a(1)        <---------DAG2            ---------->ID1  < --------HSFB2a(1)               --------->YAB1        <-----------GT1          --------->AHL20(2)--- -->ETT(1)<-----------RAV1(2) <---------HSFB2a(2) --------->ARR11(3)  --------->ARR14(2)    --------- --------HSFC1(2)             --------->HSFB2a(2) <---------ARR11(3)  ---------->TaMYB80 --------->MYB52(1)   aatcatcgtctatcaggtgcgattcccaatttctaggataaataaacccaaagttcttaacttttctatcggaatttgccaattttttcgcttacggtta  4220500   <-----------GT1 --------->YAB1 -------->HAHB4 ------YAB1                                                                                  <------- ----->ICU4               --------->ATHB12                                                <---------ANAC58 ->At5g28300             <-------TEIL                                                     <---------ANAC58 ---------YAB1       <---------YAB1                                               <----------DOF2 ------>YAB1  ---------->ID1                     <---------LBD16              <---------TOE1(3)     - -->GT1  --------->ARR14(2)          <----------DOF2                          <---------TOE2(3)  ----   taatgataccatatttgtccattttgattcatttggagccttttttttgtttctgggtagtctgtgatttagctagaattagggttttatgttcttgtca  4220600  Previous    Next  AGI:  At1g12390.1    Description:  cornichon family protein. similar to cornichon family protein [Arabidopsis thaliana] (TAIR:AT1G62880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16964.1); contains InterPro domain Cornichon; (InterPro:IPR003377) Range:  from: 4220098    to: 4221772    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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