Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------MYB46(3)                                                                                        <------MYB46(1)                                                                                        <------MYB83                                                                                        <---------DEAR3(2)                                                                                        --------->MYB52(2)                                                                                       <---------MYB46(3)                                                                                       <---------AtMYB61                                                                                      <--------P           <----------TaMYB80                                                       <---------MYB46(3) -----ZmHOX2a(2)                                                              <---------ARR11(3) ------->CCA1(2)                                                              --------->ARR11(3) -------ARR11(3)                                                        --------->YAB1<---------MYB55(1) ------>ARR14(2)                  <---------TOE2(3) <-----------GT1<---------AHL20(2) <---------MYB52(1) -------ARR14(2)                ---------->DOF2<---------DAG2      --------->AHL20(1)<-------GAMYB ------>ARR11(3)           --------->ICU4      <----------DOF2     --------->AHL20(2)<---------MYB52(1) ----->GLK1(1)    <---------TOE1(2)   ----------->GT1         --------->AHL20(2)    <---------DEAR3(2)   gatccaagagttgatattcccatgttgaaatgaataaaggttgaaaaaacttttttgcagtccaaaaaataaaatgaaaatgtcttcggttggttccaat  4121000                                                ------->TEIL            <----------DOF2                                             --------->ANAC55(2)        <---------DAG2                                          <---------MYB52(1)      --------->ZAT6                                         <----------DOF2   --------->AHL20(1)                                         ------>ZmHOX2a(1) --------->AHL20(2)               <--------             <---------WOX13(1)         --------->TOE2(3)  --------->ARR11(3)      <---------AHL20(2)           <---------MYB46(3)        <---------ARR11(3)    <---------ARR11(3)      --------->AHL20(2)           --------->ATHB12          --------->ARR11(3)    <---------AHL20(2)  --------->AHL20(2)      <---------TOE2(3)        <---------ANAC55(2)         <---------AHL20(1) --------->AHL20(2)     --------->MYB52(1)        --------->ANAC55(2)       --------->GLK1(2)    <---------AHL20(2) ----   tccaatctaagggtgattggcaaagtttgacttatgtaatatcctttatgtatttggagaatatattagcactactttatttaaaataaatattctttat  4121100                               <XXXXXXXXXXXXXXXXXXXXMIR161.1                            <------ZmHOX2a(2)                         <---------TOE2(3)                           <---------ARR14(2)                      --------->DOF5.7(2)                           --------->ARR14(2)                    --------->ANAC58                           <---------ARR14(3)                    --------->ANAC58                           <---------ARR11(3)          <-----------RAV1(1)                           --------->ARR14(3)          <---------ICU4 <---------TOE1(3)                           --------->ARR11(3)       <---------ICU4--------->TOE2(3)                 --------->ANAC46                   --------->ATHB51 <---------DOF5.7(2)                 --------->ANAC58                  <---------YAB1--------->ANAC46                   < ---------->DOF2 --------->ANAC58            <---------At5g28300 <---------ANAC55(2)           ------ --DOF2  --------->CCA1(2) <---------AGP1--------->WOX13(1)    <---------ALFIN1   --------------->AtSPL8 ----->YAB1    --------->ZAT6------>ZmHOX2a(2)     --------->ICU4--------->ANAC55(1)    <----------DOF2   caaaaaagaatatatgaacactcaaataagatctcgatttagtcaattacagcataattgttgcaacacgttaatgtttcattttctgttcttttttgtt  4121200           --------->GLK1(1)          <-----------ARR10          <---------ARR11(1)          ------->TEIL  <---------AHL20(1)          --------->ARR14(2)          <---------ARR14(2)         <---------ARR14(1)       <---------ANAC46 --------->AHL20(1)       <---------ANAC55(1)       <---------ANAC58 --------->AHL20(2)       <---------ANAC58 <---------AHL20(2)                                        --------->AHL20(2)       --------->ANAC55(2)                             <---------AHL20(2)         <---------AHL20(2)       <---------ANAC55(2)                        <---------ANAC46         --------->ZAT6  <-----------RAV1(1)  --------->AHL20(2)         <------MYB83            <---------TOE2(3) ----------DOF2  --------->bZIP60(2)              <------MYB46(1)       <---------ICU4     <---------AHL20(2) ---->ID1<---------CCA1(2)        --------->ZAT6 --------->MYB59  --------->TOE2(3) <------------CBF   ctctttgttgcgtatctccatgtcattaaattgctaacactcgtttttagttgggttttaatttcatttcttaattaagactaaaaaattgatttttttt  4121300       ----------->GT1                                                                         ------   --------->ARR14(2)                                              *TSS                     ---------   <---------ARR14(2)                    ------------>CBF        <---------ICU4          --------->ZAT2   ------>MYB83                         --------->ANAC46         --------->YAB1       <------NtERF2   --------->MYB52(1)             ----------->TBP               <---------YAB1        --------->At4g35610   ------>MYB46(1)              ------>ZmHOX2a(1)             --------->YAB1         ------>NtERF2 -- <---------MYB59   --------->DEAR3(2) <-----------GT1<---------ZAT14        ---------->DOF2 ---------   agaccgaaccggttaatccgaaccgaagacgttcctatataaacccaattttgagaacagagcatcatcatcacacaaaaaagatggcaccagcacgaac  4121400                                           <---------SPL7                                           --------->LBD16                                          --------->RAP2.6(2)                                          --------->DEAR3(1)                                         <------NtERF2                                         --------->ATERF1(1)                                         <---------LBD16                                        <---------ATERF1(1)                                       --------->DEAR3(1)                                       --------->RAP2.3(2)                                       --------->ATERF1(2)                                       --------->RAP2.3(3)                                       <---------ATERF1(2)                                      --------->DEAR3(2)                                      <---------ABI4(2)                                      --------->RAP2.3(1)                                      --------->ORA47(2)                                      <------NtERF2                                      --------->MYB46(3)                                      --------->ERF1                                      --------->DEAR4(2)                                      --------->RRTF1(1)                                      --------->ATERF1(1)                                      --------->RAP2.6(1)                                     <---------ATERF1(1)                                     <---------At4g35610                                     --------->ABI4(2)                                     <---------RAP2.3(1)                    XXXXXXXXXXXXXXXXXXXXX>MIR2935                                     ------>NtERF2                     ------>NtERF2                                     --------->ZAT2                   --------->DEAR3(1)                                     --------->At4g35610            <---------ATERF1(1)                                    --------->ARR14(2)              ------>NtERF2                 --------->ALFIN1   <---------ARR14(2)              --------->LBD16                <-------MYC3       <------NtERF2                   --------->ANAC46                ------->MYC3       --------->ATERF1(1)             <---------ALFIN1               --------->O2       <---------ATERF1(1)            <---------ATERF1(1)          --------->ANAC58        --------->LBD16              <---------ZAT2     <---------At4g35610        <------NtERF2                  --------->At4g35610     --------->At4g35610        --------->ATERF1(1)            --------->ZAT2<-----------ARR10   <---------WRKY38(1)          <---------LBD16                <---------GLK1(1)                    =   <---------WRKY12            ------>NtERF2                   --------->GLK1(1)                    = <-----------HVH21             <---------ATERF1(1)  <---------At4g35610--------->LBD16              - ->TEIL------->GAMYB   ----------->HVH21------>NtERF2          <---------At4g35610                  < >ANAC58  --------->ANAC46    --------->ARR14(2)    --------->At4g35610<------NtERF2     <------NtERF2 ------->LBD16 <---------O2   <---------ARR14(2)    <---------ZAT2 --------->DEAR3(1)  <---------DEAR3(1) >ANAC58  --------->ANAC58 ------>ZmHOX2a(2)        --------->ZAT2<---------LBD16   --------->DEAR3(1)   ccgagtcaactcactcaacgtggcagtgatcggagccggagccgccggactcgtagctgcaagagagctccgccgcgagaatcacaccgtcgtcgttttc  4121500                                            <---------MYB52(2)                                           --------->At4g35610                                        ---------->DOF2                                       ------>MYB46(1)                                       --------->MYB52(1)                                       ------>MYB83                                      ----------->HVH21                                     <---------MYB52(2)                                     <---------MYB111(2)                                     <---------MYB59                                     <---------MYB111(1)                                     <---------MYB46(2)                                    --------->ANAC58                           <---------HSFB2a(1)                                    --------->ANAC55(1)                        --------->HSFB2a(1)                                    --------->ANAC46                           --------->MYB46(3)                                    --------->ANAC58                           <---------HSFC1(2)                       <---------LBD16--------->MYB55(1)                       --------->HSFC1(2)         ---------->DOF2        --------->ANAC46                             ------>MYB46(1) ===================bZIP_DOF   <---------REM1(2)                    <------ZmHOX2a(2) ===================bZIP_DOF <---------ARR14(2)          <----------CDC5     ------>MYB83--------->AtLEC2 -------->TGA1a  <---------TOE1(2)--------->ANAC46  --------->ARR14(2)     <---------MYB59 ---------TGA1a <------NtERF2--------->ARR14(2)     <---------ARR14(2)  --------->MYB52(1)   gaacgtgactcaaaagtcggaggtctctgggtatacacacctaacagcgaaccagacccgcttagcctcgatccaaaccgaaccatcgtccattcaagcg  4121600                          <---------TGA1a                          <---------O2                          --------->O2                                                             --                          --------->ANAC46                                                         <-                  ------>MYB46(1) <---------AtLEC2                                                 <-                  ------>MYB83   <---------ZAT14                                   <---------ATHB12--   <---------GLK1(2)      --------->TGA1a                 <---------ANAC58  ----------->TGA1  <------ <---------YAB1--------->MYB46(3)--------->ZAT18          <---------ANAC58<---------At4g35610 -------   tctatgattctctccgaaccaatctcccacgagagtgcatgggttacagagacttccccttcgtgcctcgacctgaagatgacgaatcaagagactcgag  4121700                                  --------->REM1(2)                               --------------------->WRI1                               --------->TOE2(3)        <-----------HVH21      --------->TOE1(3) ------->HSFC1(2)         <---------ANAC58 --------HSFC1(2)         <---------ANAC58 --------HSFB2a(1)    <---------ANAC58                               <---------HSFB2a(1) ------->HSFB2a(1)    <---------ANAC58                               <---------HSFC1(2)       <------ ---HSFB2a(2)       <---------ARR11(3)                               <---------MYB46(3)       <------ -->HSFB2a(2)       --------->ARR11(3)                               --------->HSFC1(2)     ---------   aaggtaccctagtcacagagaagttcttgcttaccttgaagacttcgctagagaattcaaacttgtggagatggttcgatttaagaccgaagtagttctt  4121800                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               --------->AGP1                                                               --------->ARR11(3)                                                         <XXXXXXXXXXXXXXXXXXXXMIR1886.3                                                      ---------->DOF2                                                  ------>ZmHOX2a(2)                                                 <---------GLK1(1)                                                 <------ZmHOX2a(2)                                                 --------->GLK1(1)                          <-------TEIL          --------->ARR14(2)           <---------MYB46(3)                       ----------->GT1          <---------ARR11(3)         <-------GAMYB                     <---------ANAC46           <---------ARR14(2)        <-----------RAV1(1) ---ANAC58   --------->ANAC58                   --------->ARR11(3)<----------DOF2 ---ANAC58   --------->ANAC58             --------->At4g35610  <---------ARR11(3) >ARR11(3) --------->CCA1(2)              <---------At4g35610----------->ARR10    <---------ANAC46  -   gtcgagcctgaagataagaaatggagggttcaatccaaaaattcagatgggatctccaaagatgagatctttgatgctgttgttgtttgtaatggacatt  4121900  Previous    Next  AGI:  At1g12140.1    Description:  flavin-containing monooxygenase family protein / FMO family protein. similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G62570.1); similar to FMO-like protein [Thellungiella halophila] (GB:ABJ98059.1); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro do Range:  from: 4121367    to: 4124593    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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