Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ANAC58                                --------->ANAC58                                --------->ANAC58                             --------->LBD16                             <---------At4g35610                            --------->ANAC46         ---------->DOF2   <---------LBD16 ---------AHL20(1)       --------->ARR14(2)          --------->At4g35610        <-------TEIL -------->AHL20(1)     --------->HSFC1(2)        <-----------GT1  ---------->DOF2 -------->ARR11(3)     <---------HSFC1(2)------->GAMYB --------->HSFB2a(2)<---------WRKY12 ---------ARR11(3)   --------->ARR11(3) --------->ANAC46        <---------HSFB2a(2)                -- -ZmHOX2a(2)         <---------ARR11(3) --------->ANAC58        --------->HSFB2a(2)          <-------   aatatatagaataaagaatttaagatgtttccgcaggcatcaacgcaagtttaactgctggaatttctaaaagagttcaacgttcaaatgagaagttgta  4083800                                ---------->DOF2                            <---------ANAC55(2)                       --------->MYB52(2)         <-------TEIL                     --------->DOF5.7(2)  <---------REM1(1)                     <---------MYB52(1)  <---------------------WRI1               <---------GLK1(2)      --------->AHL20(2)  <---------AHL20(2)    --------->TOE1(3)        --------->ANAC58 <-------TEIL       --------->TOE1(3)   <-------GAMYB <---------ATHB12   --------->ANAC58 ------->TOE1(3)    --------->TOE2(3)  --------->MYB52(2)--------->bZIP60(1)   --------->DAG2 --REM1(1)        <---------TOE2(3)    <---------MYB46(3)<---------bZIP60(1)  ---------->DOF2   acgttcaatttaagagtttcaacgttaattacatgaaaggtttgttgtaacgttcaatgaagtcacagaagaaggaagcaaaaagcttctcaaaaaactt  4083900                                     <---------AHL20(1)                                     --------->AHL20(2)                                 --------->AHL20(2)                                       --------->ALFIN1                                 <---------YAB1                                   --------->ICU4                                --------->AHL20(1)                              --------->MYB52(1)                        ----------->GT1       ------>ZmHOX2a(1)              --------->ANAC55(1)                    <---------AHL20(2)<---------AHL20(2)                     --------->ANAC46                    --------->AHL20(2)--------->AHL20(2)                     --------->ANAC58                <---------AHL20(2)   <---------AHL20(2)                      --------->ANAC58               <---------AHL20(2)<---------AHL20(2)                         --------------->AGL15            --------->AHL20(2)  --------->AHL20(2)                          <---------------AGL15            <---------AHL20(2)  <---------AHL20(1)       ----------->GT1 <-----------GT1<---------ANAC46   ctattgcatttcatttttttatttatatgtaaaatataatttaatttcctagttgaaaattgataaatctattttttacaagtaatggttaagtggtgat  4084000                                                                                      --------->YAB1                            <---------------AtSPL8--------->ANAC58                    <---------ICU4                     ----------->GT1              --------->ANAC46                   <---------YAB1                   <---------ANAC46         --------->AHL20(2)        <-------MYC3   --------->ICU4                   ----------->GT1      --------->AHL20(2)      <----------DOF2    --------->YAB1              <---------ANAC58          <---------AHL20(2)    <-------TEIL      --------->YAB1    ---              <---------ANAC58        <---------YAB1      --------->DAG2--------->ZAT18       <------              <---------ANAC46       <---------AHL20(1) ---------->DOF2 ------------>CBF<---------YAB1         <-----------RAV1(1)--------------->AtSPL8--------->ANAC58    ------->MYC3 <---------ICU4 <--   gttctaaatctatgtggcatgaggtgtaaaattgtacattatttttttatataagcaaaaaaggttctttcatgtgcaatactcatcatcatggttcttt  4084100                      --------->AHL20(2)                     <---------AHL20(2)          <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(2)      <---------AHL20(2)                      <------------CBF     --------->AHL20(2)                     <---------AHL20(2)     <---------AHL20(2)                  --------->AHL20(2)     <---------AHL20(1)                  <---------AHL20(2)     --------->AHL20(1)                 <---------AHL20(1)    --------->AHL20(2)<---------AHL20(2)--------->AHL20(2)                                         <- ------>HSFB2a(2)<---------AHL20(2)     <---------AHL20(2)   <---------ANAC58      ------>ZmHOX2a(1) ----DOF2<---------AHL20(1)  ----------->GT1<---------YAB1   <---------ANAC58  <---------ALFIN1    -- -------HSFB2a(2)--------->AHL20(2)------------>CBF         *TSS          <-----------GT1   <--------   atagaaattaattttttttttaatttatatttagtaaaacaatttttttattgtaaaccatttgcttctactataaatacccctcctcttgatcaaatct  4084200                                                               <----------DOF2                                                             ------>ZmHOX2a(1)                                                          ---------->ID1                        <----                                                   --------->AHL20(1)                           <----                                        <---------YAB1    <-----------GT1                    <-------    --------->YAB1                      ------>ZmHOX2a(1)<-----------GT1                    <-------GAMYB --------ZAT14                 <-----------GT1     <---------ARR11(3)<----------DOF2      <------NtERF2 ------->ZAT14               <-----------GT1       <---------AHL20(1)<---------DAG2      ------>NtERF2 -CCA1(2)           <-------TEIL   ------>ZmHOX2a(1)<---------AHL20(2)                  <---------ALFIN1   cttcactcatcaaaacatcacatacactatttttctcctctccttattgtctatatatttttcctctttagctttttcatttcgaaatggccaccgttga  4084300                                                                              --------->ATHB12                                                                              -------->HAHB4                                                                             <---------YAB1                                                                             --------->ICU4                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                        --------->LBD16          <---                                                                       --------->ANAC46 --------->YAB1                                                                       --------->HSFB2a(2)  <--------                                                <---------AHL20(2)     <---------HSFB2a(2)  --------- -----TOE1(3)                 <---------YAB1<---------YAB1            <---------LBD16  <---------YAB1 -----TOE2(3)        <-----------HVH21 <---------ARR11(3)      <---------YAB1<---------ATHB12 <------ --MYB52(1)  <-----------RAV1(1)      <---------CCA1(2)    --------->At5g28300<---------ICU4---------   ggtattctcttaattttgttgttcgtcacattataaatctatatctataattcattttcgctgttaatattatccggaaatgattagttatcaaaatctt  4084400                                                                                                -----                                                                                                <----      --------->YAB1                                          <---------ICU4                  ------- --------GT1                                            <---------MYB52(1)                    ------- -ARR11(3)                                 --------->ANAC58   --------->YAB1             --------->ANAC58 >ARR11(3)                                 --------->ANAC58--------->YAB1                --------->ANAC58 ---ICU4                  <---------ANAC55(2)         <---------ANAC46                   --------->ANAC46 >GLK1(2)      <---------YAB1  --------->At4g35610 <-----------GT1         <----------DOF2<----------   tacaatatttatcatgtatgattctatcaagtgagatggaacggtatgcaatttttccgtttaataatgtgttttcgcttacaggttgaacaagtcactc  4084500                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                             <------NtERF2                                                                                --------->HSFB2a(1)                                                                                <---------HSFC1(2)                                                                                <---------HSFB2a(1)                                                                             <------NtERF2  ---------                                                                            --------->LBD16 ------>NtERF2                                                                          <---------LBD16  <---------ALFIN1                                                                        =============================                                                                        ------->GAMYB      --------->DEAR3(1)                                                                       <---------MYB55(2)  --------->ANAC46                            ---------->DOF2                            --------->MYB46(3) <---------LBD16                          ------>MYB46(1)                             ---------->DOF2     --------->MYB46(3)                          ------>MYB83                                ===============================                         ----------->RAV1(1)       <---------ANAC46  ------>MYB46(1)      <------NtERF2                    <---------SPL7                 --------->ALFIN1  ------>MYB83 --------->GLK1(2)                  <---------------AtSPL3         <---------MYB46(3)  --------->MYB52(1)   --------->ATERF1(1) ---->ZAT14       --------------->AtSPL3        <---------AtMYB61    ----------->RAV1(1) <---------ATERF1(1) -----ZAT14       --------------->AtSPL8        --------->ALFIN1   <---------MYB59<---------ARR14(2) -->ANAC58        <---------------AtSPL8 <------ZmHOX2a(1)         --------->MYB46(3) <-----------HVH21 -->ANAC58        <---------TOE1(3)    <---------ANAC46        --------->WRKY38(1)--------->ARR14(2) -HVH21           <---------TOE2(3) --------->ALFIN1           ----------->HVH21--------->HSFC1(2)   cagtagcagtagagaacgttgaggtaccaacaaagacagtggaggagacagtggtggagacagaggtgacccaacagccggaagaatccgtccccgccgt  4084600 ------>HVH21 ------HVH21 --->At5g28300                    --------->MYB52(1) --->LBD16          <---------------AGL15 -->O2              --------------->AGL15       <---------MYB46(3) -->TGA1a          ----------------->AGL3    <---------MYB46(3) ---O2   --------->GLK1(2)<---------------------WRI1 ---TGA1a--------->ARR14(2)      --------->TOE1(2)                 ---------->DOF2 >LBD16  <---------ARR14(2)     <---------MYB52(2)--------->HSFB2a(2)                               - ===MYC_MYB        ----------------->AGL2   --------->ALFIN1 <------NtERF2                     ------ ===bZIP_DOF --------->LBD16    --------->MYB46(3)<---------HSFB2a(2)         --------->MYB52(1) <---   gacagaacaaaaatccgaagcaccaattgtagaaacaaacgaagaagtggttgtggaagaggcagagaagaaagatgaagaaaccgagaagaaaacagag  4084700  Previous    Next  AGI:  At1g12080.1    Description:  contains domain PTHR22683 (PTHR22683) Range:  from: 4084160    to: 4085034    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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