Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <------ZmHOX2a(2)                                     --------->CCA1(2)                                    --------->AGP1                                    --------->ARR11(3)              <---------At5g28300                                    <---------ARR11(3)             <-----------GT1                                    --------->ARR14(2)          <---------YAB1                                    <---------ARR14(2)         <---------AHL20(2)     <-------TEIL               ---------->DOF2         >>>>>>>>>MYB98 -----TEIL                  <----------ID1             <-----------GT1                              - ->DOF2                 ---------->DOF2      ----------->GT1 <---------AHL20(2)                 -----   ttcaacatacatatataacatcaagttaaagagacaaagatccaacatggtaacatttaacatattattttaccatcaagagagcatttactcgatttgt  4077700                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                    <-------MYC3                                                                                    ------->MYC4                                                                                    ------->MYC3                                                                                    <-------MYC2                                                                                    <-------MYC4                                                                   <---------DEAR3(1)       <--------                                                                  <------NtERF2     ------->PIF5                                                                  <---------At4g35610    <---------MYB46(3)                                                                  --------->At4g35610   <---------DEAR3(1)                                                           <---------ANAC58         <-------PIF5                                                           <---------ANAC58         ------->MYC2                                                         ------>NtERF2  <------NtERF2--------->ALFIN1                                                       --------->RAP2.6(3)         --------->TGA1a                                                      =======================================MYC_MYB                                                      ------->GAMYB<------NtERF2   <---------TGA1a               <---------ALFIN1             --------->ANAC58      ------>NtERF2    <---------ANAC55(2)               --------->REM1(1)    <---------ANAC46 --------->MYB46(3)<-----------HVH21--------->ALFIN1           <---------At4g35610     <------NtERF2     ----------->HVH21--------->ALFIN1  <---------AtMYB61       <---------ALFIN1        --------->ANAC46 --------->ANAC46  <---------LBD16  --------->ANAC55(2)     --------->DEAR3(1)        --------->ANAC58 --------->ANAC58<---------DEAR3(1) ==================     --------->RAP2.6(2) --------->HSFB2a(2)--------->ANAC58    <---------RAP2.6(2)--------->O2  --------->ANAC46       <---------HSFB2a(2)--------->ANAC46  <---------WRKY18(1) ------------>OsbHLH66 ----->ZmHOX2a(1)    --------->REM1(1)    --------->ZAT6<---------DEAR3(1)       <---------ALFIN1   < ----->ID1 --------->At4g35610 --------->ANAC58 --------->ANAC58<---------RAP2.3(2)<---------O2     -   tcctaagccgcacagctacacttacacctagaaacgcagcgtttacactccagcaacgacggcttggccgcggtgtcgcatcgacacgtggtggtgcact  4077800                                                      ------->TEIL                                                   --------->ANAC58                                               <-----------HVH21                                              ------->PIF5                                              <-------PIF5                                    <------                                              --------->ATERF1(2)                             <------               --------->RAP2.3(3)            --------->DREB2C(2)                             <------               ----------->RAV1(1)            <---------ATERF1(2)                        <---------AtLEC2             ------>NtERF2  --------->ANAC58  --------->DEAR3(1)                       --------->AtLEC2             --------->ABI4(1)            <---------ABI4(2)                        --------->LBD16 -ZAT14     --------->DEAR3(1)            <---------ZAT2                           ------>NtERF2 >ZAT14     --------->AtMYB61       ------->TEIL   --------->ANAC58               --------->ANAC58 >ZAT18     <---------ALFIN1--------->ANAC58 <---------LBD16                      --------->ANAC58  < -ZAT18  <---------ALFIN1   --------->ANAC46--------->MYB52(1)                    --------->ANAC46  - ============================bZIP_DOF<---------At4g35610     --------->ZAT18      --------->DEAR3(1)- ---------At4g35610        ------->GAMYB  --------->ZAT2     <---------ZAT18     <---------LBD16    < ----->ZmHOX2a(1) ---------->DOF2--------->AtLEC2<---------ALFIN1       <---------AHL20(2)------->TEIL   tcctctgagtaacaccgccccaaagacaacgagccatgcatcggagcaccggcacgcacttagggcagtcgtatttcatttgctccgccatgcatgtctt  4077900                                                 --------->At4g35610                                                 <---------At4g35610                                                 --------->LBD16                                                 <---------LBD16                                                 --------->ATERF1(1)                                                 <------NtERF2                                                --------->DEAR3(1)                                               <---------DEAR3(1)                                             <---------SPL7                                             <---------ATERF1(1)                                            <---------DEAR3(1)                                            --------->MYB46(3)                                 ----------->RAV1(1)<------NtERF2                                 ------>NtERF2--------->ATERF1(1)                                 <-----------HVH21<------NtERF2                                --------->DREB2C(2)------>NtERF2                                --------->DEAR3(1)<---------DEAR3(1)                              <---------ATERF1(1)------>NtERF2                        <------NtERF2      --------->ATERF1(1)                        --------->At4g35610--------->SPL7                        <---------At4g35610<------NtERF2                       ------>NtERF2      <---------ATERF1(1)                       <---------RAP2.6(3)--------->MYB52(1)                       --------->LBD16    ------>NtERF2 --------->HSFB2a(2)    <---------MYB52(1)--------->ATERF1(2)--------->DEAR3(1) ---ANAC58            <---------RAP2.6(2)--------->RAP2.3(3) ---ANAC46   <---------MYB46(3) --------->ANAC46<---------ATERF1(1) ---ANAC58  <---------AtMYB61<---------ALFIN1------>NtERF2                          <---------At4g35610 ---------At4g35610   <---------ATERF1(2)----------->HVH21                          --------->At4g35610 -------->At4g35610  <---------LBD16    --------->DEAR3(2)               <---------GLK1(2) -------->ZAT2       --------->RAP2.6(3)--------->RAP2.3(1)   <---------ATHB12   <------ZmHOX2a(1) ---------ZAT2  <---------MYB46(3)    --------->ARR14(2)<---------HSFB2a(2)  <---------YAB1   gcagctgttttgtgatggtggatgccggcagacaccgccagagccgacggccgcggctctcgaaatcaatagcaagattatgaggaagatgagagaagag  4078000                  --------->ARR11(3)                  <---------ARR11(3)                                                 <---------YAB1                 <------MYB46(1)                                           <----------DOF2                 <------MYB83                                           <---------ARR11(3)         <-               <--------P                   <---------AtMYB61           --------->ARR11(3)         <-           <---------ANAC58            <------MYB46(1)                 <---------CCA1(2)           --           <---------ANAC58            <------MYB83                  <---------AHL20(2)      *TSS<---    <----------DOF2         <-----------RAV1(1)                      --------->AHL20(2)      <-------   aagaggctttgaagcttgtaggtcttcttcatgttggaatttggttttggtttgtgagagagtttggaaatttatatctttgagaatgttattgtcttta  4078100                                                                                                  <--                                        --------->ATHB12                                          ---                             <---------ARR11(3)                                                   <--                             --------->AHL20(1)                                               -------      <---------TOE2(3)      <---------AHL20(1)                                              -------- --------AHL20(2)           --------->YAB1    <---------GLK1(2)                              <------- ----------TBP      --------->CCA1(2) <---------MYB52(1)                                     -------- ------->AHL20(2)  <---------ARR11(3)<-------GAMYB                         ---------->DOF2   <------- --------TBP     <---------YAB1     <-----------RAV1(1)          --------->HSFB2a(2) <---------WOX13(1) ---DOF2       --------->YAB1--------->ARR11(3)   <---------YAB1 <---------HSFB2a(2)<------------CBF   tttatatagaggttttgtcatgatatacaaaaatatttctgttgattagattattatctagtgacttccacaagagttaaagacgagattgatagtgcag  4078200                                                    ------>ZmHOX2a(1)                                                   --------->TOE2(3)                                         <---------ZAT18                                         --------->ZAT14                                          --- -------ZAT14                            <---------ZAT14                                          <-- ------>ZAT14                            --------->ZAT18                                    <<<<<<<<<MYB98 -------ZAT18                          <---------------AtSPL8    --------->ZAT14           ---------- -------->AtSPL3                       --------------->AtSPL8    <---------ZAT14          ----------- ->ZAT14                  --------->YAB1----------->GT1   <---------ZAT18            <---------ATHB12 --ZAT18     <---------AHL20(2)   <---------HSFB2a(2)     --------->ZAT18        <---------AHL20(2)-- ->ZAT18  ------->TEIL    --------->ATHB12         --------->TOE1(3)        <---------AHL20(2)   ---- --ZAT14<-------TEIL     <-------TEIL <---------ANAC46 ---------->DOF2 <----------DOF2--------->YAB1   tacaccaagatgcatttaagtgaggcattcattgttcttgaagtgtacaatttccttaaatgcgctcttcactctttttttatttcaatgatatgttaaa  4078300            ----------->HVH21           <---------MYB52(1)          --------->LBD16         <---------HSFB2a(2)   <---------AHL20(2)  --------->AHL20(1)  <---------AHL20(1) <---------AHL20(2) ------>AHL20(1) -------AHL20(1) ->GT1   --------->HSFB2a(2)                                                                        < >GT1   <---------LBD16                    --------->At4g35610                                     -- ------->AHL20(2)            <---------AHL20(2)                                                    <- ----->AHL20(2)              --------->AHL20(2)                                      --------->HSFB2a(2)   tatatatatttccggtaacagaatgaaacatttttttaaaaaaccagatgaaaatatagaatatacaaaatgagttttggtaaacttgtagaatgaaaca  4078400             <---------AHL20(2)           --------->AHL20(2)          <---------AHL20(1)          --------->AHL20(1)       <---------AHL20(2)       --------->AHL20(2)                                                                         ---       --------->YAB1                                                                <---------YAB1<-    --------->YAB1                                                                 --------->AHL20(2)   <---------AHL20(2)                                                              <---------AHL20(2) ---------AHL20(2)                                                                 --------->ATHB51-- ------->AHL20(2)                                 <---------YAB1          <-------TEIL    ----------- --------AHL20(2)<-----------RAV1(1)       --------->MYB52(1)  ----------->GT1<---------TOE1(2)   ---   attaaataataatatatatatgtggcaaactgaatttagttttgaaaacggtatgaatgaaacaagggtcaaaacattcgtagaattatttttagtaaaa  4078500                       ------>MYB83             ------->GAMYB    <---------TOE1(2)  ------>MYB46(1) ------>CCA1(1)      <---------MYB59                                          ------>MYB46(1) --------ARR11(3)    --------->TOE1(2)                                        ------>MYB83 ------->ARR11(3)    <---------MYB111(1)       <----------DOF2              <---------MYB59 >GT1       --------->MYB46(3)           <----------DOF2                    --------->AtMYB61 ------>RVE1(1)    ------->TEIL  <----------DOF2                          >>>>>>>>>MYB2   atatcccagtttcaaccgaagaacctactaaatttcttttaggctttttctttatatttagaactctccaagggaaaaccaaaccaagttaagtttcaaa  4078600  Previous    Next  AGI:  At1g12064.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN77938.1) Range:  from: 4077496    to: 4078093    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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