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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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-------->AHL20(2)                   --------->AHL20(2)
----->TOE2(3)        <---------AHL20(2)
------>GT1           --------->AHL20(2)                         --------->AHL20(2)
----TOE2(3)         <---------AHL20(2)                     --------->AHL20(2)
----TOE1(3)         --------->AHL20(2)              <---------TOE2(3)                       --------
--AHL20(2)          <---------AHL20(1)              <---------TOE1(3)            <---------ATHB12
-AHL20(2)  <-------TEIL          <----------DOF2  <---------AHL20(2)        --------->YAB1  <-------
 
gttaaaattccatatacatacaatttaatttctcatcttttaaatatgtgtgtttaatgttataaaataaaacatctaatcgaaatcaagacgattttaa  3973500
                 <---------YAB1
               --------->YAB1
              <---------YAB1
              <---------AHL20(2)
             <---------AHL20(1)
             --------->AHL20(1)
             --------->AHL20(2)
      <---------ZAT6  --------->DAG2               ------->TEIL
      ----------->GT1---------->DOF2          --------->CCA1(2)                  <-----------GT1  <-
 <----------DOF2 --------->ICU4    <---------AHL20(2)             <---------AHL20(2)              <-
 --------->TOE2(3)--------->YAB1   --------->AHL20(2) <-----------GT1  <-----------GT1           ---
->AHL20(2)   <---------AHL20(2)<---------YAB1<---------ARR11(3)   --------->AHL20(2)             ---
--AHL20(2)  --------->YAB1   --------->YAB1  --------->ARR11(3)   --------->ATHB51               <--
 
tcaactttagtgttaatataataataaagttatcacaattaaacgatagatatgtatatactaatcgaattatttatctgtttgtaacgaattggcagaa  3973600
                          ==============================================bZIP_DOF
                          --------->ANAC55(2)
                          --------->ANAC58
                          --------->O2
                          <---------ANAC55(2)
                          --------->bZIP60(1)
                          --------->ANAC46                                                    <-----
                          --------->ANAC58                                         <------ZmHOX2a(2)
                          <---------bZIP60(1)                                     --------->ARR11(3)
             <------MYB83 <---------TGA1a                                         <---------AGP1
             ----------->GT1                                                      <---------ARR11(3)
             <------MYB46(1)                                                      --------->AGP1
--------YAB1--------->MYB59        <---------At5g28300                   <-----------GT1      ------
--------AHL20(2)          <---------O2      --------->REM1(2)         <---------ICU4------>ZmHOX2a(2)
------>AHL20(1)           --------->TGA1a<---------ANAC58            --------->AHL20(2)   ----------
------>AHL20(2)       <-----------HVH21  <---------ANAC58            --------->ICU4--------->CCA1(2)
-------AHL20(1)       ------->TEIL<-----------GT1            <----------DOF2  ---------->DOF2<------
 
tataataggtagtatttggtaaatgtatcacgtcaaattactgtccgtgttgaaaacaaatgttctttggaaatatttactcaaagatctaaatccatat  3973700
                    --------->ARR14(2)
                    <---------ARR11(3)
                    <---------ARR11(1)
                   <---------CCA1(2)
               ------>MYB83
        <---------ATHB12                                      --------->YAB1                       -
       --------->ANAC58                                     <---------YAB1                      ----
       --------->ANAC46                                    --------->TOE2(3)                   <----
       --------->ANAC58                                   --------->ATHB12                    ------
     <---------ALFIN1                                     <---------ICU4                    --------
----ARR11(3)   ------>MYB46(1)                            --------->YAB1               ------------>CBF
--->ARR11(3) --------->AtMYB61 <---------YAB1            <---------ATHB12     <---------ICU4<-------
------->AGL3 ------->GAMYB<-----------RAV1(1)            --------->ICU4       --------->YAB1<-------
---CCA1(2)  --------->MYB46(3) <---------ANAC46     --------->LBD16        --------->YAB1  <--------
 
attgttctccactcaaccatccatatctattgttgtgtttgaaacgatttgataccgcaaatcattaatagaaaatactaataataagagagcaatatat  3973800
     --------->TOE2(3)
    --------->ANAC58
    ----------->GT1                                         <---------ICU4
    --------->ANAC58                                       --------->AHL20(2)
-------->YAB1                                     --------->At5g28300
----->YAB1                                        --------->LBD16
-----AHL20(2)                                    ----------->GT1       ----------->HVH21        ----
--->AHL20(2)                                     --------->TOE2(3)   <---------At4g35610      ------
->AHL20(1)                                       <---------ANAC46    --------->At4g35610   ---------
--AHL20(1)                                ------------>CBF <---------AHL20(2)              <--------
--ARR11(3)              <-------TEIL     <-----------GT1--------->AHL20(2)                 ---------
---TBP          --------->YAB1       ----------->TBP   --------->AHL20(2) *TSS  --------->TOE2(3)
 
aataagaacgtaaattcaaaaatagcatacatatatgtctatatatacaataccgtaaataaaaaattactccgatgacaaaacctctaagcatctagaa  3973900
                                                                                         ---------->DOF2
                                                                                    ----------->GT1
                                                                                    <----------ID1
                                                                                   <---------TOE2(3)
                                                                                 ---------->DOF2
                                                                                <---------AHL20(2)
    ----------->GT1                                                          <---------------AGL15
------->GT1                                    --------->ATHB12             --------------->AGL15
---->DOF2                                     --------->ICU4                <---------------AGL15
>HSFC1(1)                                     <---------YAB1               ----------------->AGL3 <-
-HSFB2a(2)                       <----------DOF2             ------->MYC3<---------ARR14(2)   <-----
>HSFB2a(2)         <---------ATHB12         <---------AtLEC2 <-------MYC3--------->ARR14(2)   ------
 
agaaaaaatgaaaaatacttcaatctttctagttgtctttgccctatgcatgattagcaatgcatatggccattcgaatccatttaaaggaaaaaagacg  3974000
                                                                                                   <
                                                                 --------->YAB1--------->ARR11(3)  -
  <---------YAB1                                    --------->ARR14(2)     ---------->DOF2<---------LBD16
------GAMYB       <----------DOF2                   <---------ARR14(2)<-------TEIL       -----------
----O2    <------ZmHOX2a(1)                <-------TEIL         <---------ATHB12--------->CCA1(2) --
--->O2 <---------LBD16      --------->MYB46(3) ----------->GT1  --------->ICU4 <---------ARR11(3)---
 
tcgttgttattcaggaacagtctttctcacaacaaatggctcaaggtacgttgtaaatctggggacaatgatgttcgtgaaagatatatgaaacctggag  3974100
                                                             ---------->DOF2        ---------->DOF2
                          <---------MYB52(1)      <---------ZAT18                <-------TEIL
---------ARR14(2)       <---------bZIP60(1)       --------->ZAT18  <---------At4g35610
-------->ARR14(2)       --------->bZIP60(1)      <---------ANAC46  --------->At4g35610
>RAV1(2)               ----------->STF1       <-----------RAV1(1)<---------------------WRI1
------->ATHB12        <---------TGA2(2)  <---------DAG2  <<<<<<<<<EIN3        ----------->GT1
-------->ARR10       ----------->TGA1    <----------DOF2----------->GT1      --------->ANAC46-------
 
aagattggggttttagtttccacgatgacgttatgggagaaacacttttctggtgtacaatgtataaaggagctgattacaaggtacaaaagaagtttga  3974200
                                          --------->YAB1
                                          <---------ICU4
                                         --------->ICU4
                                       --------->YAB1
                                      <---------YAB1                         <----------DOF2       <
                                  ----------->GT1                    --------->YAB1           ------
                                <---------ANAC58                  --------->WOX13(1)         -------
                                <---------ANAC58                 ------>ZmHOX2a(2)          <-------
                                <---------ANAC46                <------ZmHOX2a(2)         <---------ARR14(2)
                               <------NtERF2<-----------RAV1(1)--------->ARR11(3)         --------->ARR14(2)
---->HVH21                    <---------MYB46(3)               <---------ARR11(3)       <---------SPL7
 
cgcatatgttcaagacaagagaatgcctcatggtggctcgtataattatgttgctcaagaagatgggatctatcacagtactttgatacaccgtatgcgg  3974300
     --------->ATHB12
    <---------YAB1
---------ARR11(3)      ----------->GT1                                  <---------ARR11(1)
--->LBD16              <---------YAB1 <---------TOE1(2)                 --------->ARR11(3)
-->ANAC46       <---------TOE2(3)     <---------TOE2(2)  --------->AHL20(2)   --------->ATHB12  ----
--LBD16<---------WOX13(1)            ------>ZmHOX2a(1)--------->YAB1   <---------CCA1(2)      ------
 
aagatgtatgattggaattagggatgttgataaaactctcctatgtttatccaatatttataaaatgcttattcaaatctttgatttgatatagttgtaa  3974400
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AGI:  At1g11765.1   
Description:  S1 self-incompatibility protein-related. similar to self-incompatibility protein-related [Arabidopsis thaliana] (TAIR:AT3G26880.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264)
Range:  from: 3973875    to: 3974508    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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