Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ATHB12                                                -------->ATHB1                                                <---------ICU4                                                --------->YAB1                                               <---------ATHB12                                             ------>MYB83                               <---------------AGL15                  <---------HSFC1(2)                       ---------->DOF2       ------>MYB46(1)          <---------HSFB2a(1)                    ----------->GT1  --------------->AtSPL8           --------->HSFB2a(1)                <---------ARR14(2)   <---------------AtSPL8           --------->HSFC1(2)               <---------At4g35610<---------ARR14(2)      --------->ZAT2           <-----------GT1               --------->At4g35610--------->ARR14(2)      <---------ZAT2   <----------DOF2  <----------DOF2 <-------TEIL<-----------------AGL3      --------->At4g35610 --------->YAB1 >YAB1<-----------GT1--------->At5g28300   <---------MYB59<---------At4g35610 --------->TOE2(3)<-----   tgtgctttaaactatacagatgcggtaaagagactaaatctggtaccaaatcattgtcttagctggtttcgaaatttctttcttaatactctacattatg  3941100                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                   <---------ICU4                        <---------ANAC55(2)                       <---------YAB1                        --------->ANAC55(2) <------NtERF2         --------->ICU4                  ------->TEIL             ------>NtERF2       <---------YAB1          ------->TEIL             --------->At4g35610   <---------AHL20(2)      --------->ARR11(3)   <---------DAG2 ----YAB1    <---------At4g35610   --------->AHL20(2)----------->GT1 <---------YAB1 <---------YAB1   attcaatgtaaatgcagatgtatgttatgtattcgatttatatgcccccaaaaaatggttaaatcttgattattatcgtgtcccttatgaacgttttctt  3941200                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC55(2)                                                                                    <----------DOF2                                                                                   <---------DAG2<---                     <------ZmHOX2a(2)                                    --------->MYB52(1)---------                    <-----------ARR10                                    --------->MYB46(3)<---------ANAC58                 <---------ANAC46                             ----------->RAV1(1)------>NtERF2   <---                 <---------ANAC55(2)                         <---------ALFIN1------->GAMYB <---------ANAC58                 --------->ANAC55(2)                        <---------MYB55(2)  <---------ALFIN1-----                <---------LBD16            ---------->DOF2  --------->MYB46(3)  --------->RAP2.6(2)               --------->MYB52(1)    --------->DEAR3(1)   ------>ZmHOX2a(1) --------->MYB46(3)-------   ctctcgcattgccaacgttacggatcaactctctcttcatcgcccaaaagaacacatctcctcccaccagagacaacaacggccacctttgttccgtcat  3941300                                                    <---------ANAC46                                                    <---------ANAC58                                                    <---------ANAC58                                                <---------ANAC58                                                <---------ANAC58                           --------->CCA1(2)   --------->ZAT2                           ========================HOX2a_HOX2a                                  <----                          <---------ARR11(3)   <---------HSFC1(2)                               <----                          <---------ARR14(2)   <---------HSFB2a(1)                              <----                          --------->ARR11(3)   --------->HSFC1(2)                          <---------ANAC46             --------->YAB1<------ZmHOX2a(2)   <---------ZAT2                              <---------ANAC58      <---------ETT(2)---------->DOF2          --------->HSFB2a(1)                         <---------ANAC58 ------ICU4 <<<<<<<<<ARR2 --------->AGP1 <-----------RAV1(2)                         <---------TOE1(3) >LBD16     <---------ATHB12       --------->MYB52(1)                                <---------TOE2(3) ------GLK1(2)     --------->YAB1  <---------ARR14(2)                              <---------WRKY12 ---->ICU4--------->WOX13(1)       --------->ARR14(2)                             --------->WRKY18(1) -->YAB1------------>CBF  --------->ARR14(2)<------ZmHOX2a(1)            <----------DOF2  --------->MYB52(2)   aatctctctcgacaatcaaaatcagaaagatccaaagtatcggccaggaagcttgcgtctaggcttcaaggcctcctttccaaggtcaaggttccttggc  3941400                                                                <---------At4g35610                                                          <------------CBF       <---------YAB1                                   --------->AHL20(2)       --------->ALFIN1  <---------ICU4       <---------GLK1(1)            --------->ANAC58             <---------ANAC46 -----ANAC58           --------->GLK1(1)            --------->ANAC46           ------->GAMYB -----ANAC46<------MYB46(1)                         --------->ANAC58        --------->MYB52(1) <----- -----ANAC58<------MYB83                          --------->ZAT6--------->At4g35610--------->ALFIN1   ttgatcattttgtttggtttctgagatttctcttggttaactcgattatctaacacgataaattgcagatggagagcataacggagtgggacttgggatc  3941500                                                                       <---------ANAC46                                                                       <---------ANAC58                               <---------ARR11(3)                      <---------ANAC58                  --------->WRKY12                                    --------->MYB52(2)                  --------->WRKY38(1)                             --------->TOE1(1)                 <---------MYB52(1)                               --------->TOE2(1)          <-----------GT1  <---------ZAT6                    <-----------GT1    <---------TOE1(2)------->TEIL <----------DOF2          --------->DOF5.7(2)     --------->ANAC46 -ZmHOX2a(2)    <-------GAMYB  --------->ARR11(3)         <----------DOF2        --------->MYB52(1)   acttcgaacgtattactccgttgaacctagtgagaactttcaagaagacgagtttttagactttaacctcgttccttgtcttcaaacggagctatggaag  3941600                                ----------->GT1                  <---------ANAC58                  <---------ANAC58                <---------ARR11(3)        --------->At4g35610            ---------->DOF2                --------->ARR11(3) --------->AHL20(2)   <---------ARR11(3)                    -------            ---------->DOF2    ----------->GT1          --------->ARR11(3)    --------->CCA1(2)         --------->GLK1(2)   ---------->DOF2 <------ZmHOX2a(1)  --------->At4g35610 ---------->DOF2   gctcaaacgagaatcaaagagcttgaggctgaaaagtttaaatcagaggaaactataagatgtctcatcagaaaccaaagaaatgagaaagaagaaacca  3941700                                                                                                    -                                                                                            ---------                                                                                            <--------                                                                                            <--------                <---------ANAC55(2)                                                         <--------                <---------ANAC58   ---------->DOF2               <---------At4g35610        <--------                <---------ANAC58--------->ANAC58              ---------->DOF2     ---------->DOF2  --       <---------MYB46(3) --------->DAG2                  ----------->GT1    <---------TOE1(2)     <-     <---------MYB52(1)  ---------->DOF2              ---------->DOF2   --------->GLK1(1)   --------- -->MYB46(3)    <---------ANAC46--------->ANAC58 ---------->DOF2 --------->At4g35610      -----------   ctaatccatttgttgattacttgaaggaaaagttaagcaaagagagggaagaaaagaaaagagttaaagctgagaattctaggttaaagaagaagatttt  3941800                                                                            <---------ARR14(2)                                                                            --------->ARR14(2) -------->CCA1(2)                                                          <------ZmHOX2a(1) >ARR14(3)                                                             <---------ANAC46 -ARR14(2)                                                          ----------->TGA1 -ARR11(3)                                                          ----------->HVH21 -ARR14(3)                                                    --------->ARR14(2) -GLK1(2)      ---------->DOF2                                <---------ARR14(2) ------->ARR14(2)                                            ========================HOX2a_HOX2a --------ARR14(2)                       <-------TEIL   --------->ALFIN1<---------O2     <------------ >ARR11(3)  ----------->GT1            --------->CCA1(2)     <------ZmHOX2a(1)------>ZmHOX2a(2) >ARR10   --------->ICU4        ---------->DOF2      --------->ALFIN1  <---------bZIP60(2)-----------   ggatatggagtcatcagtaaatcggttgagaagagaaagagatacaatggagaaggtgtgcgaggaactggtgacgaggatcgatgaattgaaggtgaat  3941900                                                 <---------ANAC46                                            --------->At4g35610                                     =================RAV                                     <---------REM1(1)                                     <-----------RAV1(1)                                    --------->ARR11(3)                 --------->MYB52(1)<---------At4g35610              --------->ANAC58     --------->At4g35610      <---------ANAC46 <---------ZAT6           <---------SPL7        ================RAV     --------->ALFIN1   <---------TOE1(3)         --------->ALFIN1  <------ZmHOX2a(1)<---------At4g35610    ---------->DOF2 ---------WRI1--------->ANAC58   <-----------RAV1(2)----------->ARR10       <---------TOE2(3) >GT1  --------->ALFIN1 <------ZmHOX2a(1) <-----------RAV1(2)     <------ZmHOX2a(1)  <-------TEIL   acaaggagggtgtgggacgaaacggaggaggagaggcagatgttgcagatggctgagatgtggagggaggaaagggttagggttaagttcatggatgcaa  3942000  Previous    Next  AGI:  At1g11684.1    Description:  unknown protein Range:  from: 3941103    to: 3941300    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17933.1) Range:  from: 3941469    to: 3942212    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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