Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------AHL20(2)                                            <---------ARR11(3)                                            --------->AHL20(1)              <---------AHL20(2)            --------->ARR11(3)            <<<<<<<<<MYB98             ----------->GT1                      --------->MYB52(1)           ----------->GT1           <------ZmHOX2a(1)                      -------->P          ----------->GT1    <---------------AGL15        <---------ANAC46 ------->GAMYB ----------->GT1         <---------ARR11(3)  --------------->AGL15      <---------ZAT18    --------->MYB55(1)   --------->ANAC58         <-----------------AGL2      --------->ZAT18   <---------MYB111(2)   --------->ANAC58         <-----------------AGL3 >>>>>>>>>ARR2          <---------MYB55(2) ------>HSFB2a(2)         --------->GLK1(2) <---------AHL20(1)            <---------MYB52(2) -------HSFB2a(2)  ----------->GT1 <---------TOE2(3)--------------->AtSPL8--------->MYB46(3)   ctagtaggcaatatgttaaattggtaaaattctattttaggaagaaaatatttgattgtgccctatattttggacaacaaccggtgcaaaacagttacta  3940900                        <---------ARR11(3)                       <---------CCA1(1)                       --------->RVE1(1)                       <---------RVE1(1)                       --------->CCA1(1)                  <------ZmHOX2a(1)           <---------AHL20(2)           --------->YAB1           --------->AHL20(2)          <---------YAB1--------->ARR11(3)        --------->YAB1 --------->GLK1(1)              <---------ZAT14       --------->AHL20(2)            <----------DOF2  --------->ZAT14       <-----------GT1       <---------AHL20(2)  --------->WOX13(1)         --------->ARR14(2)   <---------YAB1   ---------       <---------YAB1  <---------GLK1(1)              <---------ARR14(2)--------->ICU4     <-------TEIL   <---------ANAC55(2)<---------ARR11(3)           <---------ANAC46     <---------YAB1  ----------->GT1 --------->AHL20(2)   --------->ARR11(3)  <---------YAB1 --------->ANAC46<---------ICU4--------->DAG2   aaattacatataattatataggaagatatctatcaaatacttttatttttgttcagtatacccaaaattatctgattattacaagagaaaaggttcataa  3941000                                                -------->ATHB1                                                --------->YAB1                                                <---------ICU4                                                --------->ATHB12                                               <---------ATHB12                                             ------>MYB46(1)                               <---------------AGL15                  <---------HSFB2a(1)                       ---------->DOF2       ------>MYB83             <---------HSFC1(2)                    ----------->GT1  <---------------AtSPL8           --------->HSFC1(2)                <---------ARR14(2)   --------------->AtSPL8           --------->HSFB2a(1)               <---------At4g35610--------->ARR14(2)      --------->ZAT2           <-----------GT1               --------->At4g35610<---------ARR14(2)      <---------ZAT2   <----------DOF2  <----------DOF2 <-------TEIL<-----------------AGL3      <---------At4g35610 --------->YAB1 >YAB1<-----------GT1--------->At5g28300   <---------MYB59--------->At4g35610 --------->TOE2(3)<-----   tgtgctttaaactatacagatgcggtaaagagactaaatctggtaccaaatcattgtcttagctggtttcgaaatttctttcttaatactctacattatg  3941100                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                   <---------ICU4                        <---------ANAC55(2)                       <---------YAB1                        --------->ANAC55(2) <------NtERF2         --------->ICU4                  ------->TEIL             ------>NtERF2       <---------YAB1          ------->TEIL             --------->At4g35610   <---------AHL20(2)      --------->ARR11(3)   <---------DAG2 ----YAB1    <---------At4g35610   --------->AHL20(2)----------->GT1 <---------YAB1 <---------YAB1   attcaatgtaaatgcagatgtatgttatgtattcgatttatatgcccccaaaaaatggttaaatcttgattattatcgtgtcccttatgaacgttttctt  3941200                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC58                                                                                    <----------DOF2                                                                                   <---------DAG2<---                     <------ZmHOX2a(2)                                    --------->MYB52(1)---------                    <-----------ARR10                                    --------->MYB46(3)<---------ANAC58                 <---------ANAC46                             ----------->RAV1(1)------>NtERF2   <---                 <---------ANAC55(2)                         <---------ALFIN1------->GAMYB <---------ANAC55(2)                 --------->ANAC55(2)                        <---------MYB55(2)  <---------ALFIN1-----                <---------LBD16            ---------->DOF2  --------->MYB46(3)  --------->RAP2.6(2)               --------->MYB52(1)    --------->DEAR3(1)   ------>ZmHOX2a(1) --------->MYB46(3)-------   ctctcgcattgccaacgttacggatcaactctctcttcatcgcccaaaagaacacatctcctcccaccagagacaacaacggccacctttgttccgtcat  3941300                                                    <---------ANAC58                                                    <---------ANAC46                                                    <---------ANAC58                                                <---------ANAC58                                                <---------ANAC58                           <------ZmHOX2a(2)   <---------HSFB2a(1)                           --------->CCA1(2)   --------->HSFC1(2)                               <----                          <---------ARR14(2)   --------->ZAT2                                   <----                          --------->AGP1       --------->HSFB2a(1)                              <----                          --------->ARR11(3)   <---------ZAT2                              <---------ANAC58             --------->YAB1========================HOX2a_HOX2a                             <---------ANAC58      <---------ETT(2)---------->DOF2    <-----------RAV1(2)                               <---------ANAC46 ------ICU4 <---------ATHB12       --------->MYB52(1)                                <---------TOE1(3) >LBD16     <<<<<<<<<ARR2 <---------ARR11(3)   <---------HSFC1(2)                    <---------TOE2(3) ------GLK1(2)     --------->YAB1  --------->ARR14(2)                              <---------WRKY12 ---->ICU4--------->WOX13(1)       <---------ARR14(2)                             --------->WRKY18(1) -->YAB1------------>CBF  --------->ARR14(2)<------ZmHOX2a(1)            <----------DOF2  --------->MYB52(2)   aatctctctcgacaatcaaaatcagaaagatccaaagtatcggccaggaagcttgcgtctaggcttcaaggcctcctttccaaggtcaaggttccttggc  3941400                                                                --------->At4g35610                                                          <------------CBF       <---------YAB1                                   --------->AHL20(2)       --------->ALFIN1  <---------ICU4       <---------GLK1(1)            --------->ANAC46             <---------ANAC46 -----ANAC46           --------->GLK1(1)            --------->ANAC58           ------->GAMYB -----ANAC58<------MYB46(1)                         --------->ANAC58        --------->MYB52(1) <----- -----ANAC58<------MYB83                          --------->ZAT6<---------At4g35610--------->ALFIN1   ttgatcattttgtttggtttctgagatttctcttggttaactcgattatctaacacgataaattgcagatggagagcataacggagtgggacttgggatc  3941500                                                                       <---------ANAC58                                                                       <---------ANAC58                               --------->ARR11(3)                      <---------ANAC46                  --------->WRKY12                                    --------->MYB52(2)                  --------->WRKY38(1)                             --------->TOE2(1)                 <---------MYB52(1)                               --------->TOE1(1)          <-----------GT1  <---------ZAT6                    <-----------GT1    <---------TOE1(2)------->TEIL <----------DOF2          --------->DOF5.7(2)     --------->ANAC46 -ZmHOX2a(2)    <-------GAMYB  <---------ARR11(3)         <----------DOF2        --------->MYB52(1)   acttcgaacgtattactccgttgaacctagtgagaactttcaagaagacgagtttttagactttaacctcgttccttgtcttcaaacggagctatggaag  3941600                                ----------->GT1                  <---------ANAC58                  <---------ANAC58                --------->ARR11(3)        --------->At4g35610            ---------->DOF2                <---------ARR11(3) --------->AHL20(2)   --------->ARR11(3)                    -------            ---------->DOF2    ----------->GT1          <---------ARR11(3)    --------->CCA1(2)         --------->GLK1(2)   ---------->DOF2 <------ZmHOX2a(1)  --------->At4g35610 ---------->DOF2   gctcaaacgagaatcaaagagcttgaggctgaaaagtttaaatcagaggaaactataagatgtctcatcagaaaccaaagaaatgagaaagaagaaacca  3941700                                                                                                    -                                                                                            <--------                                                                                            <--------                                                                                            ---------                <---------ANAC58                                                            <--------                <---------ANAC55(2)---------->DOF2               <---------At4g35610        ---------                <---------ANAC46--------->ANAC58              ---------->DOF2     ---------->DOF2  --       <---------MYB46(3) --------->DAG2                  ----------->GT1    <---------TOE1(2)     <-     <---------MYB52(1)  ---------->DOF2              ---------->DOF2   --------->GLK1(1)   <-------- -->MYB46(3)    <---------ANAC58--------->ANAC58 ---------->DOF2 --------->At4g35610      -----------   ctaatccatttgttgattacttgaaggaaaagttaagcaaagagagggaagaaaagaaaagagttaaagctgagaattctaggttaaagaagaagatttt  3941800  Previous    Next  AGI:  At1g11684.1    Description:  unknown protein Range:  from: 3941103    to: 3941300    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g11690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17933.1) Range:  from: 3941469    to: 3942212    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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